GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:25:09

Sequence gi568815583r:66399410_66603530 : 204121 bp : 44.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  30827  30886   60  1  0   74   99    49 0.071   3.53
 1.02 Intr +  35529  35828  300  2  0   86  113   322 0.871  31.43
 1.03 Intr +  37337  37483  147  1  0  112   80   244 0.999  26.43
 1.04 Intr +  45247  45298   52  0  1  100   94    40 0.720   4.28
 1.05 Intr +  50444  52057 1614  0  0   19   37   549 0.002  31.14
 1.06 Intr +  63818  63869   52  0  1   60   98    35 0.004  -0.33
 1.07 Intr +  77733  77803   71  0  2  108   92     3 0.004   1.53
 1.08 Intr +  82346  82470  125  0  2  134   68   230 0.949  25.90
 1.09 Intr +  85581  85721  141  2  0   89   44    57 0.709   1.95
 1.10 Term +  91093  91206  114  0  0   95   42   112 0.939   5.87
 1.11 PlyA +  92095  92100    6                               1.05

 2.03 PlyA -  94430  94425    6                               1.05
 2.02 Term -  95143  95027  117  1  0   68   43   186 0.999  10.64
 2.01 Init -  98322  98233   90  0  0   97   55   197 0.985  17.79
 2.00 Prom -  99502  99463   40                             -11.92

 3.08 PlyA -  99942  99937    6                               1.05
 3.07 Term - 100243  99998  246  1  0   76   37   314 0.981  20.89
 3.06 Intr - 100767 100647  121  2  1   69   82    83 0.999   6.30
 3.05 Intr - 101696 101540  157  0  1   78  108    83 0.999   8.37
 3.04 Intr - 102095 101966  130  2  1   34   51   189 0.559  10.07
 3.03 Intr - 102503 102379  125  0  2   57   73   181 0.999  13.80
 3.02 Intr - 104120 103949  172  2  1  105   80   235 0.999  23.92
 3.01 Init - 105381 105379    3  0  0   98  101     0 0.815   2.30
 3.00 Prom - 111573 111534   40                              -5.46

 4.00 Prom + 115996 116035   40                              -1.46
 4.01 Init + 119492 119560   69  1  0   91   86   -12 0.650  -0.04
 4.02 Intr + 121641 121796  156  2  0   87   99    81 0.978   9.31
 4.03 Intr + 130277 130342   66  1  0   80  116    21 0.754   3.20
 4.04 Intr + 132838 132994  157  0  1   60   97    50 0.747   2.68
 4.05 Term + 134048 134073   26  0  2   87   42    23 0.220  -4.01
 4.06 PlyA + 134538 134543    6                               1.05

 5.12 PlyA - 135444 135439    6                               1.05
 5.11 Term - 140620 140597   24  1  0   91   44    29 0.297  -2.98
 5.10 Intr - 147386 147246  141  2  0   54   91    68 0.686   4.25
 5.09 Intr - 152452 152253  200  2  2   53   80   115 0.942   6.27
 5.08 Intr - 158474 158313  162  0  0  128   85   134 0.999  17.05
 5.07 Intr - 158627 158573   55  2  1  117  105    30 0.779   6.15
 5.06 Intr - 161692 161597   96  1  0   82  100    87 0.872   9.51
 5.05 Intr - 161906 161778  129  2  0   97  102   153 0.995  18.49
 5.04 Intr - 164216 164107  110  0  2   69   94   111 0.992   9.80
 5.03 Intr - 164589 164502   88  0  1   99   83    51 0.719   5.24
 5.02 Intr - 165430 165267  164  2  2   70  109   119 0.994  11.89
 5.01 Init - 165956 165839  118  2  1  109   60   173 0.998  14.96
 5.00 Prom - 171870 171831   40                              -2.06

 6.04 PlyA - 173132 173127    6                               1.05
 6.03 Term - 175294 175175  120  1  0   89   48    72 0.366   1.77
 6.02 Intr - 187901 187585  317  0  2  -68    3   423 0.495  13.98
 6.01 Init - 189721 189661   61  1  1   78  110    43 0.972   6.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:66399410_66603530|GENSCAN_predicted_peptide_1|891_aa
HSCLPDATGEGELYNSLGSLTWSFLSMIGVLLWVDFSGDSIDLCSPLWNRTNLEALQKKL
EELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK
LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMVIKGLTYLREK
HKIMHRAWTTRAKLSKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQH
INRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDIPTANIIPNG
QKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMI
VYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKR
IKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRF
NAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTK
TAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICR
KLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGKDFMSKTPKAMATK
AKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYSSDKGLISRIYNELKQIYKKKT
TPSKNWKDSRIYVKREDISIEQQCFSLERVGEAGADSQGWWQAVLYVKPSNILVNSRGEI
KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP
PPDAKELELMFGCQVHAFIKRSDAEEVDFAGWLCSTIGLNQPSTPTHAAGV

>gi568815583r:66399410_66603530|GENSCAN_predicted_CDS_1|2676_bp
cattcctgcttgccagatgccacaggggaaggagaactttacaactccctgggctctctg
acctggagctttctttccatgataggagtacttctttgggttgacttctctggtgacagt
attgacttgtgctccccactttggaacaggaccaacttggaggccttgcagaagaagctg
gaggagctagagcttgatgagcagcagcgaaagcgccttgaggcctttcttacccagaag
cagaaggtgggagaactgaaggatgacgactttgagaagatcagtgagctgggggctggc
aatggcggtgtggtgttcaaggtctcccacaagccttctggcctggtcatggccagaaag
ctaattcatctggagatcaaacccgcaatccggaaccagatcataagggagctgcaggtt
ctgcatgagtgcaactctccgtacatcgtgggcttctatggtgcgttctacagcgatggc
gagatcagtatctgcatggagcacatggtaataaaaggcctgacatatctgagggagaag
cacaagatcatgcacagagcctggacaacaagagcaaaactgtcaaaaatcctcaataaa
atactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggc
ttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcat
ataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagccttt
gacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattgatgggacg
tatttcaaaataataagagctatctatgacatacccacagccaatatcataccgaatggg
caaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcacca
ctcctattcaacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaata
aagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgatt
gtttatctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttc
agcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaac
aacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagaga
ataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactac
aaaccactgctcaaggaaataaaagaggacacaaacaaatggaagaacattccatgctca
tgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattc
aatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaactacttta
aagttcatatggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaac
aaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaa
acagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagagccctca
gaaataatgccacatatctacaactatctgatctttgacaaacctgagaaaaacaagcaa
tggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtaga
aagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatggattaaa
gatttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccatt
caggacataggcgtgggcaaggacttcatgtccaaaacaccaaaagcaatggcaacaaaa
gccaaaattgacaaatgggatctaattaaactcaagagcttctgcacagcaaaagaaact
accatcagagtgaacaggcaacctacaacatgggagaaaattttcgcaacctactcatct
gacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaaca
accccatcaaaaaactggaaggacagtaggatatacgtgaagagagaagatatctcgatt
gaacagcagtgtttttccctggagcgggtgggagaagctggagctgacagccagggatgg
tggcaagctgtgttatatgtcaagccctccaacatcctagtcaactcccgtggggagatc
aagctctgtgactttggggtcagcgggcagctcatcgactccatggccaactccttcgtg
ggcacaaggtcctacatgtcgccagaaagactccaggggactcattactctgtgcagtca
gacatctggagcatgggactgtctctggtagagatggcggttgggaggtatcccatccct
cctccagatgccaaggagctggagctgatgtttgggtgccaggttcatgcttttatcaag
agatctgatgctgaggaagtggattttgcaggttggctctgctccaccatcggccttaac
cagcccagcacaccaacccatgctgctggcgtctaa

>gi568815583r:66399410_66603530|GENSCAN_predicted_peptide_2|68_aa
MLSRLQELRKEEETLLRLKAALHDQLNRLKMLVHVDNEASINQTTLELSTKSHVTEEEEE
EEEEESDS

>gi568815583r:66399410_66603530|GENSCAN_predicted_CDS_2|207_bp
atgctgagccggcttcaggaactgcgcaaggaggaggagacgctgctgcggttgaaggca
gccctgcacgaccagctgaaccgcctcaagatgttggtgcatgtagacaatgaagcatca
atcaaccaaacaaccctggagctgagcacaaagagtcatgtgacggaagaggaggaggag
gaagaggaagaagaatcagattcctaa

>gi568815583r:66399410_66603530|GENSCAN_predicted_peptide_3|317_aa
MACARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGH
RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI
QRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDE
LYGTWRKAASLKSNYNKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR
VDKAAAAAAALQAKSDEKAAVAGKKPVVGKKGKKAAVGVKKQKKPLVGKKAAATKKPAPE
KKPAEKKPTTEEKKPAA

>gi568815583r:66399410_66603530|GENSCAN_predicted_CDS_3|954_bp
atggcgtgtgctcgcccactgatatcggtgtactccgaaaagggggagtcatctggcaaa
aatgtcactttgcctgctgtattcaaggctcctattcgaccagatattgtgaactttgtt
cacaccaacttgcgcaaaaacaacagacagccctatgctgtcagtgaattagcaggtcat
cgtattgaggaagttcctgaacttcctttggtagttgaagataaagttgaaggctacaag
aagaccaaggaagctgttttgctccttaagaaacttaaagcctggaatgatatcaaaaag
gtctatgcctctcagcgaatgagagctggcaaaggcaaaatgagaaaccgtcgccgtatc
cagcgcaggggcccgtgcatcatctataatgaggataatggtatcatcaaggccttcaga
aacatccctggaattactctgcttaatgtaagcaagctgaacattttgaagcttgctcct
ggtgggcatgtgggacgtttctgcatttggactgaaagtgctttccggaagttagatgaa
ttgtacggcacttggcgtaaagccgcttccctcaagagtaactacaacaagaagatccat
cgcagagtcctaaagaagaacccactgaaaaacttgagaatcatgttgaagctaaaccca
tatgcaaagaccatgcgccggaacaccattcttcgccaggccaggaatcacaagctccgg
gtggataaggcagctgctgcagcagcggcactacaagccaaatcagatgagaaggcggcg
gttgcaggcaagaagcctgtggtaggtaagaaaggaaagaaggctgctgttggtgttaag
aagcagaagaagcctctggtgggaaaaaaggcagcagctaccaagaaaccagcccctgaa
aagaagcctgcagagaagaaacctactacagaggagaagaagcctgctgcataa

>gi568815583r:66399410_66603530|GENSCAN_predicted_peptide_4|157_aa
MAHNPNMTHLKINLPVTALPPLWVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPV
DEILQIPPLSSTATLLCKVRQVPLLFLCPNILICKVKLHSGSNSLLSKLIHQSYHGTMDT
VSLSGTIPVQMLLEIGLDKLKKDYISFFIAHSETSES

>gi568815583r:66399410_66603530|GENSCAN_predicted_CDS_4|474_bp
atggctcacaatcctaatatgacccatttgaagattaatctgccagttactgcccttcct
cccctttgggtaacatccaaaggctttgcccagtatgagctctttaagtcctctgccttg
gatgatacaatcacagcatcacaaactgcgatcgctttggatatttcctggagtcctgtg
gatgagattcttcaaatccctccactctcttcaactgcaactctgctgtgtaaagttcgg
caggttcctttacttttcttgtgccccaacatcctcatctgtaaagtaaagctccatagt
ggaagtaacagtttactaagtaagctcattcatcagtcttatcatggaaccatggacaca
gtttctctcagtgggactattccagttcaaatgcttttggaaattggtttggacaaacta
aagaaagattatatcagttttttcatagcccattcagaaacttcagaaagttga

>gi568815583r:66399410_66603530|GENSCAN_predicted_peptide_5|428_aa
MKPVWVATLLWMLLLVPRLGAARKGSPEEASFYYGTFPLGFSWGVGSSAYQTEGAWDQDG
KGPSIWDVFTHSGKGKVLGNETADVACDGYYKVQEDIILLRELHVNHYRFSLSWPRLLPT
GIRAEQVNKKGIEFYSDLIDALLSSNITPIVTLHHWDLPQLLQVKYGGWQNVSMANYFRD
YANLCFEAFGDRVKHWITFSDPRAMAEKGYETGHHAPGLKLRGTGLYKAAHHIIKAHAKA
WHSYNTTWRSKQQGLVGISLNCDWGEPVDISNPKDLEAAERYLQFCLGWFANPIYAGDYP
QVMKDYIAIKDGANIKGYTSWSLLDKFEWEKGYSDRYGFYYVEFNDRNKPRYPKASVQYY
KKIIIANGFPNPREQIDIDNVERTKRKVLITKYLTKRLKCEHKYLIEDFISTLHLKCTWL
QPFSEVFM

>gi568815583r:66399410_66603530|GENSCAN_predicted_CDS_5|1287_bp
atgaagccagtgtgggtcgccacccttctgtggatgctactgctggtgcccaggctgggg
gccgcccggaaggggtccccagaagaggcctccttctactatggaaccttccctcttggc
ttctcctggggcgtgggcagttctgcctaccagacggagggcgcctgggaccaggacggg
aaagggcctagcatctgggacgtcttcacacacagtgggaaggggaaagtgcttgggaat
gagacggcagatgtagcctgtgacggctactacaaggtccaggaggacatcattctgctg
agggaactgcacgtcaaccactaccgattctccctgtcttggccccggctcctgcccaca
ggcatccgagccgagcaggtgaacaagaagggaatcgaattctacagtgatcttatcgat
gcccttctgagcagcaacatcactcccatcgtgaccttgcaccactgggatctgccacag
ctgctccaggtcaaatacggtgggtggcagaatgtgagcatggccaactacttcagagac
tacgccaacctgtgctttgaggcctttggggaccgtgtgaagcactggatcacgttcagt
gatcctcgggcaatggcagaaaaaggctatgagacgggccaccatgcgccgggcctgaag
ctccgcggcaccggcctgtacaaggcagcacaccacatcattaaggcccacgccaaagcc
tggcattcttataacaccacgtggcgcagcaagcagcaaggtctggtgggaatttcattg
aactgtgactggggggaacctgtggacattagtaaccccaaggacctagaggctgccgag
agatacctacagttctgtctgggctggtttgccaaccccatttatgccggtgactacccc
caagtcatgaaggactacattgctataaaagatggtgctaatataaaggggtatacttcc
tggtctctgttggataagtttgaatgggagaaaggatactcagatagatatggattctac
tatgttgaatttaacgacagaaataagcctcgctatccaaaggcttcagttcaatattac
aagaagattatcattgccaatgggtttcccaatccaagagagcaaatcgacattgataat
gtagaaagaactaaacgtaaggtacttattacaaagtatttgacaaagagactaaaatgt
gaacataaataccttatagaggacttcatcagcacacttcacttgaaatgcacctggctg
cagccatttagtgaagtcttcatgtga

>gi568815583r:66399410_66603530|GENSCAN_predicted_peptide_6|165_aa
MTGSQQWDVRSNGCYFLVKAEEREEKEEEGEEEKEGEEDKEEEKEEEKEEEKRKKEKEKQ
EEEGKKKRKKEEEEKEEEEEEGEEEGEKEEEGEKEEEEGEKEEEEEEGENGEGEKGGRGG
GEGGREPPPFTLQKLEAEDLAGIFSSQPWGSPQVEMGGEKCKARS

>gi568815583r:66399410_66603530|GENSCAN_predicted_CDS_6|498_bp
atgactggttctcagcaatgggatgtgagaagtaatgggtgttacttcctggtcaaggca
gaagagagagaagagaaggaggaggagggggaggaagagaaggagggggaggaagataag
gaggaagagaaggaggaggagaaggaagaggagaagaggaagaaagagaaggagaagcag
gaggaggaggggaagaagaagaggaagaaagaggaggaggagaaggaggaggaggaagag
gagggggaggaggaaggggagaaggaagaggaaggggagaaggaggaagaggaaggggag
aaggaggaggaggaagaggagggggagaatggggagggggagaaggggggaaggggaggg
ggagaagggggaagggaacctcctcctttcacccttcagaaactggaagcagaggacttg
gctggcatcttcagcagccagccatggggttccccacaggtggaaatggggggagaaaaa
tgcaaggcacgatcctga