GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:20:44

Sequence gi568815576f:31299684_31533968 : 234285 bp : 45.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  17937  18003   67  2  1   74   62   107 0.885   7.93
 1.02 Term +  21866  21993  128  0  2   22   53   115 0.584  -0.16
 1.03 PlyA +  22772  22777    6                               1.05

 2.05 PlyA -  23093  23088    6                               1.05
 2.04 Term -  27626  27208  419  0  2  100   54   386 0.943  31.84
 2.03 Intr -  36180  36009  172  0  1  105   74   167 0.703  16.52
 2.02 Intr -  43277  43214   64  1  1  108   91    35 0.812   4.52
 2.01 Init -  45919  44649 1271  1  2  111   94  1499 0.987 144.58
 2.00 Prom -  64707  64668   40                              -0.96

 3.02 PlyA -  66741  66736    6                               1.05
 3.01 Sngl -  85908  85543  366  0  0   76   41   169 0.976   7.10
 3.00 Prom -  88811  88772   40                              -5.96

 4.00 Prom +  90318  90357   40                              -4.96
 4.01 Init + 100001 100042   42  1  0   98   80    33 0.484   3.92
 4.02 Intr + 100937 101060  124  1  1   99   76    82 0.969   8.26
 4.03 Intr + 103346 103521  176  0  2   82  109   105 0.998  11.66
 4.04 Intr + 111329 111398   70  1  1   95  109    47 0.944   6.25
 4.05 Intr + 120573 120742  170  1  2   73   93   169 0.999  15.57
 4.06 Intr + 123597 123727  131  2  2  107   84   205 0.992  21.49
 4.07 Intr + 126932 127099  168  2  0   95  101   115 0.999  12.56
 4.08 Intr + 127377 127499  123  0  0   70   92    91 0.939   7.40
 4.09 Term + 134189 134288  100  2  1  102   47    50 0.800  -0.10
 4.10 PlyA + 136069 136074    6                               1.05

 5.13 PlyA - 137030 137025    6                               1.05
 5.12 Term - 140438 140197  242  0  2  110   53   217 0.829  16.59
 5.11 Intr - 141185 141021  165  0  0  120   96    10 0.669   4.93
 5.10 Intr - 143411 143120  292  2  1   90   42   234 0.541  15.71
 5.09 Intr - 145007 144923   85  1  1   71   61    64 0.853   1.82
 5.08 Intr - 147885 147743  143  0  2  124   99    66 0.705  10.45
 5.07 Intr - 154693 154461  233  2  2   73   94   195 0.717  16.09
 5.06 Intr - 155632 155453  180  2  0   55   87    76 0.840   4.04
 5.05 Intr - 156304 156169  136  1  1   80   98   -10 0.517  -0.66
 5.04 Intr - 158967 158792  176  1  2  106  109   128 0.967  16.36
 5.03 Intr - 163450 163249  202  1  1   75   86   178 0.999  15.16
 5.02 Intr - 164284 163998  287  2  2  108    9   293 0.999  20.46
 5.01 Init - 170898 170829   70  0  1   72   77     8 0.249  -2.69
 5.00 Prom - 174341 174302   40                              -0.66

 6.00 Prom + 174919 174958   40                              -4.56
 6.01 Init + 188952 189100  149  2  2   79   98    52 0.248   4.96
 6.02 Intr + 189728 190076  349  2  1   33  -12   250 0.028   4.86
 6.03 Intr + 196955 197120  166  1  1   72   38    62 0.020  -0.87
 6.04 Intr + 197291 197434  144  0  0   42   90    60 0.647   1.85
 6.05 Term + 198094 198251  158  2  2   66   41    96 0.906   0.80
 6.06 PlyA + 200619 200624    6                               1.05

 7.00 Prom + 207704 207743   40                              -0.96
 7.01 Init + 212309 212359   51  1  0   58  103     0 0.045  -0.34
 7.02 Intr + 221552 221718  167  1  2   73   53   102 0.051   3.96
 7.03 Intr + 229007 229180  174  2  0   54   99   149 0.950  11.65
 7.04 Intr + 229815 229910   96  0  0   57   87    44 0.418   0.32
 7.05 Term + 231311 231326   16  2  1  125   46    21 0.647  -0.69
 7.06 PlyA + 232386 232391    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 221627 221516  112  1  1   42   43   175 0.925   6.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:31299684_31533968|GENSCAN_predicted_peptide_1|64_aa
MAKIQTTNADKDVEQQELSFIAAFSSSFYSLKGPFVSLGDMKRFVTSNVSCYLDLKGKFA
HVRL

>gi568815576f:31299684_31533968|GENSCAN_predicted_CDS_1|195_bp
atggccaaaatccagacaacaaatgctgacaaggatgtggagcaacaggaactttcattc
attgctgcattttccagcagcttctacagtctgaaagggccctttgtctcccttggtgac
atgaagaggtttgtcacttcaaatgtcagctgttacttggacttgaagggcaagtttgcc
catgtccgcctgtga

>gi568815576f:31299684_31533968|GENSCAN_predicted_peptide_2|641_aa
MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLA
ACSEYFESVFSAQLGDGGAADGGPADVGGATAAPGGGAGGSRELEMHTISSKVFGDILDF
AYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGT
SDLGFPLDMTNGAALAANSNGIAGSMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAG
PLSPQLLTSPFPSVASSAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGILPCGLCGKV
FTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEIC
GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK
GFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAA
YMADHLKKHSEGPSNFCSICNREGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSANGSF
SCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGPALGSP
FSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPMGPEGK

>gi568815576f:31299684_31533968|GENSCAN_predicted_CDS_2|1926_bp
atggagcgggtgaacgacgcttcgtgcggcccgtctggctgctacacataccaggtgagc
agacacagcacggagatgctgcacaacctgaaccagcagcgcaaaaacggcgggcgcttc
tgcgacgtgctcttgcgggtaggcgacgagagcttcccagcgcaccgcgccgtgctggcc
gcctgcagcgagtactttgagtcggtgttcagcgcccagttgggcgacggcggagctgcg
gacgggggtccggctgatgtagggggcgcgacggcagcaccaggcggcggggccgggggc
agccgggagctggagatgcacactatcagctccaaggtatttggggacattctggacttc
gcctacacttcccgcatcgtggtgcgcttggagagctttcccgaactcatgacggccgcc
aagttcctgctgatgaggtcggttatcgagatctgccaggaagtcatcaaacagtccaac
gtacagatcctggtaccccctgcccgcgccgatataatgctctttcgcccccctgggacc
tcggacttgggcttccctttggacatgaccaacggggcagccttggcagccaacagcaat
ggcatcgccggcagcatgcagccagaggaggaggcagctcgggcggctggtgcagccatt
gcaggccaagcctctttgcctgtgttacctggggtggaccgcttgcccatggtggctgga
cccctatccccccaactgctgacttccccattccccagtgtggcatccagtgcccctccc
ctgactggcaagcgaggccggggccgcccaaggaaggccaacctgctggactcaatgttt
gggtccccagggggcctgagggaggcaggcatccttccatgcggtctatgtggtaaggtg
ttcactgatgccaaccggctccggcagcacgaggcccagcacggtgtcaccagcctccag
ctgggctacatcgaccttcctcctccgaggctgggtgagaatgggctacccatctctgaa
gaccccgacggcccccgaaagaggagccggaccaggaagcaggtggcttgtgagatctgc
ggcaagatcttccgtgatgtgtatcatcttaaccggcacaagctgtcccactctggggag
aagccctactcctgccctgtgtgtgggttgcggttcaagagaaaagaccgcatgtcctac
catgtgcggtcccatgatgggtccgtgggcaagccttacatctgccagagctgtgggaaa
ggcttctccaggcctgatcacttgaacggacatatcaagcaggtgcacacttctgagcgg
cctcacaagtgtcagacctgcaatgcttcttttgccacccgagaccgtctgcgctcccac
ctggcctgtcatgaagacaaggtgccctgccaggtgtgtgggaagtacttgcgggcagca
tacatggcagaccacctgaagaagcacagcgaggggcccagcaacttctgcagtatctgt
aaccgagaaggccagaaatgctcacatcaggatccgattgagagctctgactcctatggt
gacctctcagatgccagcgacctgaagacgccagagaagcagagtgccaatggctctttc
tcctgcgacatggcagtccccaaaaacaaaatggagtctgatggggagaagaagtaccca
tgccctgaatgtgggagcttcttccgctctaagtcctacttgaacaaacacatccagaag
gtgcatgtccgggctctcgggggccccctgggggacctgggccctgcccttggctcacct
ttctctcctcagcagaacatgtctctcctcgagtcctttgggtttcagattgttcagtcg
gcatttgcgtcatctttagtagatcctgaggttgaccagcagcccatggggcctgaaggg
aaatga

>gi568815576f:31299684_31533968|GENSCAN_predicted_peptide_3|121_aa
MDTFLDTYTFPKLKQEEIDSLNRTIMSSKMKSVINSLLTKKSPGPDEVTAEFHQMYKDGI
VLFLLKLFQKIEAEGLLPNSFCEPGIILTLKPGRDTPKIENFKPISLMNIDAEILNKILA
N

>gi568815576f:31299684_31533968|GENSCAN_predicted_CDS_3|366_bp
atggatacattcctggacacatacaccttcccaaaactgaaacaagaagaaatagattcc
ctgaacagaacaataatgagctccaaaatgaaatcagtaataaatagcctactaacaaag
aaaagcccaggaccagatgaagtcacagccgaattccaccagatgtacaaagacgggata
gtactatttcttctgaaactatttcaaaaaattgaggcagagggactcctccccaactca
ttctgtgagcccggcatcatcctgacactaaaacctggcagagacacacccaaaatagaa
aacttcaagccaatatccttgatgaacatcgatgcagaaatcctcaacaaaatacttgca
aattga

>gi568815576f:31299684_31533968|GENSCAN_predicted_peptide_4|367_aa
MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED
VIQIVKK

>gi568815576f:31299684_31533968|GENSCAN_predicted_CDS_4|1104_bp
atgagcagcaccttagctaagatcgcggagatagaagcagagatggctcggactcaaaag
aacaaggccacagcacaccacttagggctgcttaaggctcgtcttgctaagcttcgtcga
gaactcattactccaaagggtggtggtggtggaggtccaggagaaggttttgatgtggcc
aagacaggtgatgctcgaattggatttgttggttttccatctgtggggaagtcaacactg
cttagtaacctggcaggggtatattctgaggtggcagcctatgaattcactactctgacc
actgtgcctggtgtcatcagatacaaaggtgccaagatccagctcctggatctcccaggt
atcattgaaggtgccaaggatgggaaaggtagaggtcgtcaagtcattgcagtggcccga
acctgtaacttgatcttgattgttctggatgtcctgaaacctttgggacataagaagata
attgaaaatgagctggaaggctttggcattcgcttgaacagcaaaccccccaacattggc
tttaagaagaaggacaagggaggcattaatctcacagccacttgcccccagagtgagctg
gatgctgaaactgtgaagagcattctggctgaatacaagattcataatgccgatgtgact
ctacgtagtgatgctacagctgatgacctcattgatgtggtggaaggaaacagagtttat
atcccctgtatctatgtgttaaataagattgaccaaatctccattgaggaattggatatc
atctataaggtgcctcactgtgtacccatctctgcccatcaccgctggaattttgatgac
ctattggaaaagatctgggactatctgaaactagtgagaatttacaccaaacccaaaggc
cagttaccagattacacatccccagtggtgcttccttactccaggaccacagtggaggat
ttctgcatgaagattcacaaaaatcttatcaaagaatttaaatatgctctggtctggggt
ctctctgtgaaacacaatcctcagaaagtgggtaaagaccatacgttggaggatgaggat
gtcattcaaattgtgaagaagtga

>gi568815576f:31299684_31533968|GENSCAN_predicted_peptide_5|736_aa
MGQVQWLTPVIPALWEARAGRSQDPRERVKEDDLDVVLSPQRRSFGGGCHVTAAVSSRRS
GSPLEKDSDGLRLLGGRRIGSGRIISARTFEKDHRLSDKDLRDLRDRDRERDFKDKRFRR
EFGDSKRVFGERRRNDSYTEEEPEWFSAGPTSQSETIELTGFDDKILEEDHKGRKRTRRR
TASVKEGIVECNGGVAEEDEVEVILAQEPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKV
PCLASMIEDVLGEGSVSASRFSRWFSNPSRSGSRSSSLGSTPHEELERLAGLEQAILSPG
QNSGNYFAPIPLEDHAENKVDILEMLQKAKVDLKPLLSSLSANKEKLKESSHSGVVLSVE
EVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGDMTAFNKLVSTMKASGT
LPSQPKVSQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRV
TKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSK
EDTQKASEGTAELLRALLKKVCDGENMGLSADQPDILYKALGKTTSFSGLWFCVSEKVLC
DSVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHP
PGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLAKWFGSDVLQQPLP
SMPAKVISVDELEYRQ

>gi568815576f:31299684_31533968|GENSCAN_predicted_CDS_5|2211_bp
atgggccaggtgcagtggctcacacctgtaatcccagcactttgggaggccagggcgggc
agatcacaagatccacgagagcgtgtgaaagaagatgacttagatgttgttctcagccct
cagagacggagctttggagggggctgccacgtgacagccgctgttagctcccggcgctca
ggaagtccattagagaaagatagtgatgggcttcgtctgcttggtggacgtaggattggc
agtgggaggataatctctgcccggacctttgagaaggatcaccgtcttagcgataaggac
ctgcgggacttgagagacagagaccgagagagggacttcaaggacaagcgtttcaggaga
gagtttggagatagtaagcgtgtctttggtgagcgtagaagaaatgattcttacacagaa
gaagaaccagagtggttctctgctggacccacaagtcagtctgaaaccatcgaactgact
ggctttgatgataagatactagaagaagatcacaaagggagaaaaagaacaaggcgacgg
acagcctctgtgaaggaaggtatagtagagtgcaatggaggagtggccgaagaggatgaa
gtggaggtcatccttgcacaggagcctgcggctgatcaggaagtgccaagggatgctgtc
ttgcctgagcagtccccaggagactttgactttaatgagttctttaaccttgataaggtg
ccatgcttggcttcgatgatagaagatgttttgggagaagggtcagtctctgccagtcgg
ttcagtaggtggttctctaacccgagcagatcaggaagccgatccagcagtcttgggtca
acaccacatgaagagctagagagacttgcaggtctggagcaagccatcctctctcctgga
cagaactcggggaattactttgctcctataccattggaagaccatgctgaaaataaagtg
gatattttagaaatgctacagaaagccaaagtggatttgaaacctcttctttccagcctt
tctgcaaataaagaaaaacttaaagaaagctcacattcaggggttgtgctttcagtggag
gaggtagaagcaggtctgaagggcttgaaggttgaccagcaagtgaagaattcaactccc
ttcatggcagaacacctagaagagaccttgagtgccgtaaccaacaatcgacaactgaag
aaagacggagacatgactgcgttcaacaagctagtgagcacaatgaaggcaagtgggact
ttgccttctcagcccaaagtcagccagatgagccagctggagttgcaacaggcagcttta
gaagggctggccttgccacatgaccttgctgtacaggcagcaaacttctaccagcctggt
tttggcaaaccacaggtggacagaaccagagatggattcagaaacaggcaacagcgagtg
accaagtcaccagcacccgtgcatcgagggaattcctcttcccctgcccctgctgcctcc
atcacaagcatgctttctccttcctttacccctacctcagtgattcgtaagatgtacgag
agcaaagagaaaagcaaggaggagccagcatctggaaaagcagctcttggtgacagtaaa
gaggatactcagaaggccagtgaaggtactgcagagctgttaagggcactgctcaagaaa
gtatgtgatggagaaaacatgggcctgagcgctgaccagcctgatattctatacaaagcc
ctgggcaagaccactagcttctctggactatggttctgtgtcagtgagaaggttctgtgt
gacagtgtgcttcctcctgggatggacttgagtcatttacagggaatatctggccccatc
ctgggtcagcccttttaccctttacctgctgctagtcaccctctcttaaaccctcgtcct
ggaacacctctgcatctggcaatggtgcaacagcagctacagcgctcagttctgcatcct
ccaggctctggttcccatgcagcagctgtcagcgttcagacaacccctcagaacgtgccc
agccggtcaggcctgccccacatgcactcccagctggagcatcgccccagccagaggagc
agctcccctgtgggccttgccaaatggtttggctcagatgtgctacagcaacccctgccc
tccatgcccgccaaagttatcagtgtagatgaattggaataccgacagtga

>gi568815576f:31299684_31533968|GENSCAN_predicted_peptide_6|321_aa
MGAFGGRRLLQVKESISTFCFTHTSPIHGSLVYNALHLEDKSAQNCHREQEEGGRISRPG
RFKLELAQARSRPPRPGGSVPASQPAGYPPAALRASRPCPPPAGAPAPALTHATPGAMRP
RPFYTREHRARGAPDPAATAADPYSVPPPLGGPLPRPPLPSPLPAPVRGPALTSPPSSGL
GLSGSEPGKDLSRVPPSPVKSVRASASSPESAGDVVYLRVCACADPNQGFPPPGSVAQER
KGWYMGDLTPTEPAGSNAVNKPGSLPRVGVWFTEYFKPTIETYCSEKRIPFKILLVINKA
PGHQGTLMKMYKEINVTLHVC

>gi568815576f:31299684_31533968|GENSCAN_predicted_CDS_6|966_bp
atgggggcatttggaggcaggaggcttcttcaggtcaaggaaagcatctccactttctgt
ttcacccatacttctcctatccatggctccttggtctacaatgctctgcacctggaagat
aaatcggcacaaaattgtcaccgagaacaggaggagggaggccgaatctcccggcccggg
cgcttcaagctggagctagcgcaggcccgcagccgtcctccccggcccggcggctcggtc
cccgccagccagcccgccggctacccgccggccgccttgcgggcctcgcgcccctgccca
ccccctgcgggcgccccggcgcccgcgctcacgcacgcgaccccgggagcaatgcgcccg
cgccccttctacacccgggagcaccgggcgcgcggtgccccggacccagccgccaccgcc
gccgacccttactcggtgcctccgccgctcggcggccctttgcctcggccgccgctcccc
tccccgctgcccgcaccggtacgaggcccggccctaacgtccccaccctcttctgggctc
ggcctttccggcagtgagcccggcaaggacctcagtcgggttcctccgagcccggtgaaa
tctgtccgagcctccgcttcctcccctgaaagtgcaggtgatgttgtctacctgcgggtc
tgtgcgtgcgcggatccaaatcaggggtttcctcctcccggctccgtggcccaggagcgg
aagggctggtatatgggcgaccttactcccactgagcccgcagggagtaacgcagtaaac
aaacctggaagccttccccgcgtgggagtgtggtttactgaatattttaagcctactatc
gagacctactgttcagaaaaaaggattcctttcaagatattactggtcattaacaaggca
cctggtcaccaaggaactctgatgaagatgtacaaagagattaatgttactttacatgtc
tgctaa

>gi568815576f:31299684_31533968|GENSCAN_predicted_peptide_7|167_aa
MYRLRYHFETNNVTITQRLANVWNDTITSNCSLDERVQFFFFTNSRLQMMRGNSFTFKSF
GAFDVTSSISAVRYFKDGAVKKPYSAKTLSNKKSSASFGIRRELPSTSHLVQYRGTHTCT
RQGRLRELRISLGESETLSQNNNNRFIWCLPMPGVTLDAEHIKKLLM

>gi568815576f:31299684_31533968|GENSCAN_predicted_CDS_7|504_bp
atgtatcgtttaagatatcattttgaaacaaacaatgtaaccataacacagagacttgcg
aatgtgtggaatgacaccatcaccagcaattgtagccttgatgagagagtccaattcttc
ttcttcactaatagcaggttgcaaatgatgaggggtaatagctttacctttaaatctttt
ggtgcctttgatgtcacttcaagtatctctgcagtgaggtattttaaggatggtgcagtt
aagaaaccttattctgcaaagacactgtccaacaagaagtcttctgcatcctttgggatc
cggagggagttacctagtaccagtcatctagtgcagtatcgtggcacacatacttgtacc
cgacagggccggttaagagaactgcgcatcagcctgggcgagagtgagactctgtctcag
aacaacaacaacagatttatctggtgcttacccatgccaggtgttacgctagatgctgag
catataaaaaaactgctgatgtaa