Result of FASTA (ccds) for pF1KB3111
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3111, 361 aa
  1>>>pF1KB3111 361 - 361 aa - 361 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2071+/-0.00097; mu= 7.2697+/- 0.058
 mean_var=100.8998+/-20.378, 0's: 0 Z-trim(107.8): 53  B-trim: 504 in 1/51
 Lambda= 0.127682
 statistics sampled from 9762 (9806) to 9762 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.301), width:  16
 Scan time:  2.850

The best scores are:                                      opt bits E(32554)
CCDS55830.1 PCBP2 gene_id:5094|Hs108|chr12         ( 361) 2352 443.7 1.2e-124
CCDS8859.1 PCBP2 gene_id:5094|Hs108|chr12          ( 362) 2340 441.4 5.5e-124
CCDS44901.1 PCBP2 gene_id:5094|Hs108|chr12         ( 365) 2334 440.3 1.2e-123
CCDS44900.1 PCBP2 gene_id:5094|Hs108|chr12         ( 366) 2322 438.1 5.6e-123
CCDS1898.1 PCBP1 gene_id:5093|Hs108|chr2           ( 356) 1864 353.8 1.3e-97
CCDS44904.1 PCBP2 gene_id:5094|Hs108|chr12         ( 318) 1246 239.9 2.3e-63
CCDS44903.1 PCBP2 gene_id:5094|Hs108|chr12         ( 331) 1246 239.9 2.3e-63
CCDS44902.1 PCBP2 gene_id:5094|Hs108|chr12         ( 335) 1228 236.6 2.4e-62
CCDS42974.2 PCBP3 gene_id:54039|Hs108|chr21        ( 371) 1101 213.2 2.9e-55
CCDS46652.1 PCBP3 gene_id:54039|Hs108|chr21        ( 345)  932 182.1 6.3e-46
CCDS2839.1 PCBP4 gene_id:57060|Hs108|chr3          ( 403)  855 167.9 1.3e-41
CCDS2840.2 PCBP4 gene_id:57060|Hs108|chr3          ( 360)  538 109.5 4.6e-24


>>CCDS55830.1 PCBP2 gene_id:5094|Hs108|chr12              (361 aa)
 initn: 2352 init1: 2352 opt: 2352  Z-score: 2351.4  bits: 443.7 E(32554): 1.2e-124
Smith-Waterman score: 2352; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGS
              310       320       330       340       350       360

        
pF1KB3 S
       :
CCDS55 S
        

>>CCDS8859.1 PCBP2 gene_id:5094|Hs108|chr12               (362 aa)
 initn: 2338 init1: 1819 opt: 2340  Z-score: 2339.4  bits: 441.4 E(32554): 5.5e-124
Smith-Waterman score: 2340; 99.7% identity (99.7% similar) in 362 aa overlap (1-361:1-362)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS88 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS88 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS88 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS88 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT
              190       200       210       220       230       240

              250       260       270        280       290         
pF1KB3 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW-GLDASAQTTSHELTIPNDLIGCII
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
CCDS88 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCII
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB3 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS88 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMG
              310       320       330       340       350       360

     360 
pF1KB3 SS
       ::
CCDS88 SS
         

>>CCDS44901.1 PCBP2 gene_id:5094|Hs108|chr12              (365 aa)
 initn: 1288 init1: 1288 opt: 2334  Z-score: 2333.4  bits: 440.3 E(32554): 1.2e-123
Smith-Waterman score: 2334; 98.9% identity (98.9% similar) in 365 aa overlap (1-361:1-365)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160           170      
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLE----SPPKGVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::    ::::::::
CCDS44 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTI
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KB3 PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ
              190       200       210       220       230       240

        240       250       260       270       280       290      
pF1KB3 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIG
              250       260       270       280       290       300

        300       310       320       330       340       350      
pF1KB3 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETG
              310       320       330       340       350       360

        360 
pF1KB3 GMGSS
       :::::
CCDS44 GMGSS
            

>>CCDS44900.1 PCBP2 gene_id:5094|Hs108|chr12              (366 aa)
 initn: 1733 init1: 1068 opt: 2322  Z-score: 2321.4  bits: 438.1 E(32554): 5.6e-123
Smith-Waterman score: 2322; 98.6% identity (98.6% similar) in 366 aa overlap (1-361:1-366)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160           170      
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLE----SPPKGVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::    ::::::::
CCDS44 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTI
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KB3 PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ
              190       200       210       220       230       240

        240       250       260       270        280       290     
pF1KB3 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW-GLDASAQTTSHELTIPNDLI
       ::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS44 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLI
              250       260       270       280       290       300

         300       310       320       330       340       350     
pF1KB3 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET
              310       320       330       340       350       360

         360 
pF1KB3 GGMGSS
       ::::::
CCDS44 GGMGSS
             

>>CCDS1898.1 PCBP1 gene_id:5093|Hs108|chr2                (356 aa)
 initn: 1846 init1: 1017 opt: 1864  Z-score: 1865.6  bits: 353.8 E(32554): 1.3e-97
Smith-Waterman score: 1864; 81.5% identity (91.0% similar) in 367 aa overlap (1-361:1-356)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::.:: :.:::::::::::::::::::::::::::::..:::::::::::::::::::::
CCDS18 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       :.:::::::::::::::::::::.::::::::::::::::::::::.:::::::::::::
CCDS18 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160          170       
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLES---PPKG--VT
       ::::::::::::::::::::::::::::::.:::. :::::::.::::.    :.:  .:
CCDS18 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT
              130       140       150       160       170       180

         180       190       200       210       220       230     
pF1KB3 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP
       :::.: :.::::: ::::::    ::.:..::.:       :::::::.::.::::..: 
CCDS18 IPYQPMPASSPVICAGGQDRC---SDAAGYPHATH------DLEGPPLDAYSIQGQHTIS
              190       200          210             220       230 

         240       250       260       270        280       290    
pF1KB3 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWG-LDASAQTTSHELTIPNDL
         ::.::.:.: ::::: : ::.:::.::.::::::::::. ::::.::: :::::::.:
CCDS18 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNL
             240       250       260       270       280        290

          300       310       320       330       340       350    
pF1KB3 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE
       ::::::::::.:::::::::::::::::::::. ::::::::::::::::::::.:::::
CCDS18 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE
              300       310       320       330       340       350

          360 
pF1KB3 TGGMGSS
        : :: :
CCDS18 KG-MGCS
              

>>CCDS44904.1 PCBP2 gene_id:5094|Hs108|chr12              (318 aa)
 initn: 1765 init1: 1246 opt: 1246  Z-score: 1251.2  bits: 239.9 E(32554): 2.3e-63
Smith-Waterman score: 1932; 87.8% identity (88.1% similar) in 361 aa overlap (1-361:1-318)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT
       :::::::::::::                               ::::::::::::::::
CCDS44 KPSSSPVIFAGGQ-------------------------------AYTIQGQYAIPQPDLT
              190                                      200         

              250       260       270       280       290       300
pF1KB3 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIG
       ::::::::::::::::::::::.            :::::::::::::::::::::::::
CCDS44 KLHQLAMQQSHFPMTHGNTGFSA------------GLDASAQTTSHELTIPNDLIGCIIG
     210       220       230                   240       250       

              310       320       330       340       350       360
pF1KB3 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGS
       260       270       280       290       300       310       

        
pF1KB3 S
       :
CCDS44 S
        

>>CCDS44903.1 PCBP2 gene_id:5094|Hs108|chr12              (331 aa)
 initn: 1761 init1: 1242 opt: 1246  Z-score: 1250.9  bits: 239.9 E(32554): 2.3e-63
Smith-Waterman score: 2046; 91.2% identity (91.2% similar) in 362 aa overlap (1-361:1-331)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT
       :::::::::::::                               ::::::::::::::::
CCDS44 KPSSSPVIFAGGQ-------------------------------AYTIQGQYAIPQPDLT
              190                                      200         

              250       260       270        280       290         
pF1KB3 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW-GLDASAQTTSHELTIPNDLIGCII
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
CCDS44 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCII
     210       220       230       240       250       260         

     300       310       320       330       340       350         
pF1KB3 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMG
     270       280       290       300       310       320         

     360 
pF1KB3 SS
       ::
CCDS44 SS
     330 

>>CCDS44902.1 PCBP2 gene_id:5094|Hs108|chr12              (335 aa)
 initn: 2054 init1: 1068 opt: 1228  Z-score: 1232.9  bits: 236.6 E(32554): 2.4e-62
Smith-Waterman score: 2028; 90.2% identity (90.2% similar) in 366 aa overlap (1-361:1-335)

               10        20        30        40        50        60
pF1KB3 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI
               70        80        90       100       110       120

              130       140       150       160           170      
pF1KB3 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLE----SPPKGVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::    ::::::::
CCDS44 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTI
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KB3 PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ
       :::::::::::::::::                               ::::::::::::
CCDS44 PYRPKPSSSPVIFAGGQ-------------------------------AYTIQGQYAIPQ
              190                                      200         

        240       250       260       270        280       290     
pF1KB3 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW-GLDASAQTTSHELTIPNDLI
       ::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS44 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLI
     210       220       230       240       250       260         

         300       310       320       330       340       350     
pF1KB3 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET
     270       280       290       300       310       320         

         360 
pF1KB3 GGMGSS
       ::::::
CCDS44 GGMGSS
     330     

>>CCDS42974.2 PCBP3 gene_id:54039|Hs108|chr21             (371 aa)
 initn: 1591 init1: 1099 opt: 1101  Z-score: 1105.8  bits: 213.2 E(32554): 2.9e-55
Smith-Waterman score: 1609; 71.3% identity (82.9% similar) in 369 aa overlap (1-360:33-370)

                                             10        20        30
pF1KB3                               MDTGVIEGGLNVTLTIRLLMHGKEVGSIIG
                                     :.. : ::::::::::::::::::::::::
CCDS42 EGDAFWAPSVLPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIG
             10        20        30        40        50        60  

               40        50        60        70        80        90
pF1KB3 KKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNS
       ::::.:::::::::::::::::::::::.:..:::.:::::::::  :.:::: .::.::
CCDS42 KKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNS
             70        80        90       100       110       120  

              100       110       120       130       140       150
pF1KB3 TAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG
        :.:.:::::::::::::::::::::: :::::::::::::::::::::::::::.::.:
CCDS42 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG
            130       140       150       160       170       180  

              160       170       180       190       200       210
pF1KB3 IPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP
        :..::.::::::::::::::::.::::::::.:.::::::::                 
CCDS42 TPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQ-----------------
            190       200       210       220                      

              220       230        240       250        260        
pF1KB3 SMCLNPDLEGPPLEAYTIQGQYAIPQPD-LTKLHQLAMQQSHFP-MTHGNTGFSGIE---
                     :::::::::::.:: :::::::::::. :: . . : .: : .   
CCDS42 --------------AYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL
                       230       240       250       260       270 

         270           280       290       300       310       320 
pF1KB3 SSSPEVKGYWG----LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN
        :: :...  :    ::::  ...::::::::::::::::::.:::::::::::::::::
CCDS42 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN
             280       290       300       310       320       330 

             330       340       350       360 
pF1KB3 PVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
        .:::..::.::::. :.:::::::::.::.::. :::. 
CCDS42 ATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGTL
             340       350       360       370 

>>CCDS46652.1 PCBP3 gene_id:54039|Hs108|chr21             (345 aa)
 initn: 1428 init1: 921 opt: 932  Z-score: 938.0  bits: 182.1 E(32554): 6.3e-46
Smith-Waterman score: 1407; 65.5% identity (76.4% similar) in 368 aa overlap (1-360:33-344)

                                             10        20        30
pF1KB3                               MDTGVIEGGLNVTLTIRLLMHGKEVGSIIG
                                     :.. : ::::::::::::::::::::::::
CCDS46 EGDAFWAPSVLPHSTLSTLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIG
             10        20        30        40        50        60  

               40        50        60        70        80        90
pF1KB3 KKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNS
       ::::.:::::::::::::::::::::::.:..:::.:::::::::  :.:::: .::.::
CCDS46 KKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNS
             70        80        90       100       110       120  

              100       110       120       130       140       150
pF1KB3 TAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG
        :.:.:::::::::::::::::::::: :::::::::::::::::::::::::::.::.:
CCDS46 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG
            130       140       150       160       170       180  

              160       170       180       190       200       210
pF1KB3 IPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP
        :..::.:::::::::::                                          
CCDS46 TPDAIIQCVKQICVVMLE------------------------------------------
            190       200                                          

              220       230       240       250        260         
pF1KB3 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFP-MTHGNTGFSGIE---S
                     :::::::::::.:::::::::::::. :: . . : .: : .    
CCDS46 --------------AYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH
                            210       220       230       240      

        270           280       290       300       310       320  
pF1KB3 SSPEVKGYWG----LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP
       :: :...  :    ::::  ...::::::::::::::::::.::::::::::::::::: 
CCDS46 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA
        250       260       270       280       290       300      

            330       340       350       360 
pF1KB3 VEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
       .:::..::.::::. :.:::::::::.::.::. :::. 
CCDS46 TEGSSERQITITGTPANISLAQYLINARLTSEVTGMGTL
        310       320       330       340     




361 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:11:01 2016 done: Fri Nov  4 02:11:01 2016
 Total Scan time:  2.850 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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