Result of FASTA (ccds) for pF1KA1761
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1761, 837 aa
  1>>>pF1KA1761 837 - 837 aa - 837 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.6632+/-0.000994; mu= 8.7939+/- 0.061
 mean_var=233.2775+/-47.776, 0's: 0 Z-trim(113.2): 7  B-trim: 397 in 1/53
 Lambda= 0.083973
 statistics sampled from 13838 (13843) to 13838 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.728), E-opt: 0.2 (0.425), width:  16
 Scan time:  3.810

The best scores are:                                      opt bits E(32554)
CCDS30798.1 STRIP1 gene_id:85369|Hs108|chr1        ( 837) 5607 692.6 7.2e-199
CCDS59197.1 STRIP1 gene_id:85369|Hs108|chr1        ( 742) 4932 610.8 2.7e-174
CCDS34752.1 STRIP2 gene_id:57464|Hs108|chr7        ( 834) 2559 323.4   1e-87
CCDS47709.1 STRIP2 gene_id:57464|Hs108|chr7        ( 758) 2097 267.4 6.8e-71


>>CCDS30798.1 STRIP1 gene_id:85369|Hs108|chr1             (837 aa)
 initn: 5607 init1: 5607 opt: 5607  Z-score: 3683.8  bits: 692.6 E(32554): 7.2e-199
Smith-Waterman score: 5607; 100.0% identity (100.0% similar) in 837 aa overlap (1-837:1-837)

               10        20        30        40        50        60
pF1KA1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKAREFNRNQRKDSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKAREFNRNQRKDSE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 GYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 QHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 QHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 TFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 TFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 WRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 WRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 FEELQSMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FEELQSMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 QDNLDAFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 QDNLDAFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 GLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 VQAQMEEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VQAQMEEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTD
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 SINILADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SINILADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYM
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 AQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQF
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 CWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 CWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQ
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 TKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 TKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNA
              730       740       750       760       770       780

              790       800       810       820       830       
pF1KA1 RRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ
              790       800       810       820       830       

>>CCDS59197.1 STRIP1 gene_id:85369|Hs108|chr1             (742 aa)
 initn: 4932 init1: 4932 opt: 4932  Z-score: 3242.6  bits: 610.8 E(32554): 2.7e-174
Smith-Waterman score: 4932; 100.0% identity (100.0% similar) in 742 aa overlap (96-837:1-742)

          70        80        90       100       110       120     
pF1KA1 PDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTNQHRTH
                                     ::::::::::::::::::::::::::::::
CCDS59                               MNRKCFEEDFRIHVTDKKWTELDTNQHRTH
                                             10        20        30

         130       140       150       160       170       180     
pF1KA1 AMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVGTFNAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVGTFNAL
               40        50        60        70        80        90

         190       200       210       220       230       240     
pF1KA1 VELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAEWRTMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAEWRTMR
              100       110       120       130       140       150

         250       260       270       280       290       300     
pF1KA1 QTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGGFEELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGGFEELQ
              160       170       180       190       200       210

         310       320       330       340       350       360     
pF1KA1 SMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIKQDNLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIKQDNLD
              220       230       240       250       260       270

         370       380       390       400       410       420     
pF1KA1 AFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPKGLPWA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPKGLPWA
              280       290       300       310       320       330

         430       440       450       460       470       480     
pF1KA1 PKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAEVQAQM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAEVQAQM
              340       350       360       370       380       390

         490       500       510       520       530       540     
pF1KA1 EEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINIL
              400       410       420       430       440       450

         550       560       570       580       590       600     
pF1KA1 ADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYMAQHLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYMAQHLV
              460       470       480       490       500       510

         610       620       630       640       650       660     
pF1KA1 FANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQFCWRNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQFCWRNL
              520       530       540       550       560       570

         670       680       690       700       710       720     
pF1KA1 FSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLG
              580       590       600       610       620       630

         730       740       750       760       770       780     
pF1KA1 RQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNARRYDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNARRYDR
              640       650       660       670       680       690

         790       800       810       820       830       
pF1KA1 AHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ
              700       710       720       730       740  

>>CCDS34752.1 STRIP2 gene_id:57464|Hs108|chr7             (834 aa)
 initn: 3506 init1: 2142 opt: 2559  Z-score: 1688.2  bits: 323.4 E(32554): 1e-87
Smith-Waterman score: 3843; 69.9% identity (87.3% similar) in 830 aa overlap (23-837:4-832)

               10        20        30        40          50        
pF1KA1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGL--LPGGKAREFNRNQRKD
                             :  :... :: ..   ..:     . :.::  :.::..
CCDS34                    MEDPAAPGTGGPPANGNGNGGGKGKQAAPKGREAFRSQRRE
                                  10        20        30        40 

       60        70        80        90       100       110        
pF1KA1 SEGYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELD
       :::  . : :::::.:.:  ::::::::::::. ::  ::.::::::. .:  :.: ::.
CCDS34 SEGSVDCPTLEFEYGDADGHAAELSELYSYTENLEFTNNRRCFEEDFKTQVQGKEWLELE
              50        60        70        80        90       100 

      120       130       140       150       160       170        
pF1KA1 TNQHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLE
        . .... : ::: :::..::.:::::::.::.::::::::.::..:  : ::: ::: .
CCDS34 EDAQKAYIMGLLDRLEVVSRERRLKVARAVLYLAQGTFGECDSEVDVLHWSRYNCFLLYQ
             110       120       130       140       150       160 

      180       190       200       210       220       230        
pF1KA1 VGTFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDK
       .:::....:::.:::::: :::::.::::.:.::::.:::::..:::.::... : : : 
CCDS34 MGTFSTFLELLHMEIDNSQACSSALRKPAVSIADSTELRVLLSVMYLMVENIRLERETDP
             170       180       190       200       210       220 

      240       250       260       270       280       290        
pF1KA1 AEWRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTL
         ::: :.:::.::.  ..:.::::..::.:::::::: :::::.:::::::::.:. ::
CCDS34 CGWRTARETFRTELSFSMHNEEPFALLLFSMVTKFCSGLAPHFPIKKVLLLLWKVVMFTL
             230       240       250       260       270       280 

      300       310       320       330       340             350  
pF1KA1 GGFEELQSMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQ------QKRGR
       ::::.::..:..::. :::::: ::::.:...:::::::. . :: :.:      . :::
CCDS34 GGFEHLQTLKVQKRAELGLPPLAEDSIQVVKSMRAASPPSYTLDLGESQLAPPPSKLRGR
             290       300       310       320       330       340 

              360       370        380         390       400       
pF1KA1 R--EHKALIKQDNLDAFNERDPYKADD-SREEEEEN--DDDNSLEGETFPLERDEVMPPP
       :  ... : :::.:: .:::: .:... . :::::.  : . .:.::   ::.: ..:::
CCDS34 RGSRRQLLTKQDSLDIYNERDLFKTEEPATEEEEESAGDGERTLDGELDLLEQDPLVPPP
             350       360       370       380       390       400 

        410        420       430       440       450       460     
pF1KA1 -LQHPQT-DRLTCPKGLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHE
         : : . .:.. :::::::::::.:::: ::: ::.::::.:::.::.:.:::::::::
CCDS34 PSQAPLSAERVAFPKGLPWAPKVRQKDIEHFLEMSRNKFIGFTLGQDTDTLVGLPRPIHE
             410       420       430       440       450       460 

         470       480       490       500       510       520     
pF1KA1 SIKTLKQHKYTSIAEVQAQMEEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALL
       :.:::::::: :::.:: . :::  . :.: ::: : ..: : ::::.: ::::::::::
CCDS34 SVKTLKQHKYISIADVQIKNEEELEKCPMSLGEEVVPETPCEILYQGMLYSLPQYMIALL
             470       480       490       500       510       520 

         530       540       550       560       570       580     
pF1KA1 KILLAAAPTSKAKTDSINILADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLL
       ::::::::::::::::::::::::::::: :::::::::.:::::::.:::.::..::::
CCDS34 KILLAAAPTSKAKTDSINILADVLPEEMPITVLQSMKLGIDVNRHKEIIVKSISTLLLLL
             530       540       550       560       570       580 

         590       600       610       620       630       640     
pF1KA1 LKHFKLNHVYQFEYMAQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELP
       ::::::::.:::::..::::::::::::::::::::.::::::::::::::: :....::
CCDS34 LKHFKLNHIYQFEYVSQHLVFANCIPLILKFFNQNILSYITAKNSISVLDYPCCTIQDLP
             590       600       610       620       630       640 

         650       660       670       680       690       700     
pF1KA1 ELTAESLEAGDSNQFCWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVK
       :::.:::::::..:::::::::::::::.:::::::::::::::::::::::::::::::
CCDS34 ELTTESLEAGDNSQFCWRNLFSCINLLRLLNKLTKWKHSRTMMLVVFKSAPILKRALKVK
             650       660       670       680       690       700 

         710       720       730       740       750       760     
pF1KA1 QAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQ
       :::.:::::::::.:::::::::::::::::::::::::::.:::::::::.::::::::
CCDS34 QAMLQLYVLKLLKLQTKYLGRQWRKSNMKTMSAIYQKVRHRMNDDWAYGNDIDARPWDFQ
             710       720       730       740       750       760 

         770       780       790       800       810       820     
pF1KA1 AEECALRANIERFNARRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREV
       ::::.:::::: ::.::::: ... .: :::::::::::::.::::::...:.:::::::
CCDS34 AEECTLRANIEAFNSRRYDRPQDS-EFSPVDNCLQSVLGQRLDLPEDFHYSYELWLEREV
             770       780        790       800       810       820

         830         
pF1KA1 FSKPISWEELLQ  
       ::.:: ::::::  
CCDS34 FSQPICWEELLQNH
              830    

>>CCDS47709.1 STRIP2 gene_id:57464|Hs108|chr7             (758 aa)
 initn: 3311 init1: 1947 opt: 2097  Z-score: 1386.3  bits: 267.4 E(32554): 6.8e-71
Smith-Waterman score: 3381; 69.0% identity (86.6% similar) in 748 aa overlap (23-755:4-751)

               10        20        30        40          50        
pF1KA1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGL--LPGGKAREFNRNQRKD
                             :  :... :: ..   ..:     . :.::  :.::..
CCDS47                    MEDPAAPGTGGPPANGNGNGGGKGKQAAPKGREAFRSQRRE
                                  10        20        30        40 

       60        70        80        90       100       110        
pF1KA1 SEGYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELD
       :::  . : :::::.:.:  ::::::::::::. ::  ::.::::::. .:  :.: ::.
CCDS47 SEGSVDCPTLEFEYGDADGHAAELSELYSYTENLEFTNNRRCFEEDFKTQVQGKEWLELE
              50        60        70        80        90       100 

      120       130       140       150       160       170        
pF1KA1 TNQHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLE
        . .... : ::: :::..::.:::::::.::.::::::::.::..:  : ::: ::: .
CCDS47 EDAQKAYIMGLLDRLEVVSRERRLKVARAVLYLAQGTFGECDSEVDVLHWSRYNCFLLYQ
             110       120       130       140       150       160 

      180       190       200       210       220       230        
pF1KA1 VGTFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDK
       .:::....:::.:::::: :::::.::::.:.::::.:::::..:::.::... : : : 
CCDS47 MGTFSTFLELLHMEIDNSQACSSALRKPAVSIADSTELRVLLSVMYLMVENIRLERETDP
             170       180       190       200       210       220 

      240       250       260       270       280       290        
pF1KA1 AEWRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTL
         ::: :.:::.::.  ..:.::::..::.:::::::: :::::.:::::::::.:. ::
CCDS47 CGWRTARETFRTELSFSMHNEEPFALLLFSMVTKFCSGLAPHFPIKKVLLLLWKVVMFTL
             230       240       250       260       270       280 

      300       310       320       330       340             350  
pF1KA1 GGFEELQSMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQ------QKRGR
       ::::.::..:..::. :::::: ::::.:...:::::::. . :: :.:      . :::
CCDS47 GGFEHLQTLKVQKRAELGLPPLAEDSIQVVKSMRAASPPSYTLDLGESQLAPPPSKLRGR
             290       300       310       320       330       340 

              360       370        380         390       400       
pF1KA1 R--EHKALIKQDNLDAFNERDPYKADD-SREEEEEN--DDDNSLEGETFPLERDEVMPPP
       :  ... : :::.:: .:::: .:... . :::::.  : . .:.::   ::.: ..:::
CCDS47 RGSRRQLLTKQDSLDIYNERDLFKTEEPATEEEEESAGDGERTLDGELDLLEQDPLVPPP
             350       360       370       380       390       400 

        410        420       430       440       450       460     
pF1KA1 -LQHPQT-DRLTCPKGLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHE
         : : . .:.. :::::::::::.:::: ::: ::.::::.:::.::.:.:::::::::
CCDS47 PSQAPLSAERVAFPKGLPWAPKVRQKDIEHFLEMSRNKFIGFTLGQDTDTLVGLPRPIHE
             410       420       430       440       450       460 

         470       480       490       500       510       520     
pF1KA1 SIKTLKQHKYTSIAEVQAQMEEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALL
       :.:::::::: :::.:: . :::  . :.: ::: : ..: : ::::.: ::::::::::
CCDS47 SVKTLKQHKYISIADVQIKNEEELEKCPMSLGEEVVPETPCEILYQGMLYSLPQYMIALL
             470       480       490       500       510       520 

         530       540       550       560       570       580     
pF1KA1 KILLAAAPTSKAKTDSINILADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLL
       ::::::::::::::::::::::::::::: :::::::::.:::::::.:::.::..::::
CCDS47 KILLAAAPTSKAKTDSINILADVLPEEMPITVLQSMKLGIDVNRHKEIIVKSISTLLLLL
             530       540       550       560       570       580 

         590       600       610       620       630       640     
pF1KA1 LKHFKLNHVYQFEYMAQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELP
       ::::::::.:::::..::::::::::::::::::::.::::::::::::::: :....::
CCDS47 LKHFKLNHIYQFEYVSQHLVFANCIPLILKFFNQNILSYITAKNSISVLDYPCCTIQDLP
             590       600       610       620       630       640 

         650       660       670       680       690       700     
pF1KA1 ELTAESLEAGDSNQFCWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVK
       :::.:::::::..:::::::::::::::.:::::::::::::::::::::::::::::::
CCDS47 ELTTESLEAGDNSQFCWRNLFSCINLLRLLNKLTKWKHSRTMMLVVFKSAPILKRALKVK
             650       660       670       680       690       700 

         710       720       730       740       750       760     
pF1KA1 QAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQ
       :::.:::::::::.:::::::::::::::::::::::::::.::::::::          
CCDS47 QAMLQLYVLKLLKLQTKYLGRQWRKSNMKTMSAIYQKVRHRMNDDWAYGNGESSQSS   
             710       720       730       740       750           

         770       780       790       800       810       820     
pF1KA1 AEECALRANIERFNARRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREV




837 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 01:48:10 2016 done: Fri Nov  4 01:48:11 2016
 Total Scan time:  3.810 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com