Result of FASTA (ccds) for pF1KA1343
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1343, 495 aa
  1>>>pF1KA1343 495 - 495 aa - 495 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.3113+/-0.00111; mu= -17.4843+/- 0.067
 mean_var=431.7403+/-87.916, 0's: 0 Z-trim(115.1): 16  B-trim: 0 in 0/53
 Lambda= 0.061725
 statistics sampled from 15613 (15623) to 15613 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.48), width:  16
 Scan time:  3.820

The best scores are:                                      opt bits E(32554)
CCDS31016.1 RCOR3 gene_id:55758|Hs108|chr1         ( 495) 3362 313.4 3.7e-85
CCDS44312.1 RCOR3 gene_id:55758|Hs108|chr1         ( 553) 3362 313.4   4e-85
CCDS44314.1 RCOR3 gene_id:55758|Hs108|chr1         ( 449) 2557 241.7 1.3e-63
CCDS44313.1 RCOR3 gene_id:55758|Hs108|chr1         ( 436) 2047 196.3 5.9e-50
CCDS8052.1 RCOR2 gene_id:283248|Hs108|chr11        ( 523) 1674 163.1 6.8e-40
CCDS9974.2 RCOR1 gene_id:23186|Hs108|chr14         ( 485)  909 94.9 2.1e-19


>>CCDS31016.1 RCOR3 gene_id:55758|Hs108|chr1              (495 aa)
 initn: 3362 init1: 3362 opt: 3362  Z-score: 1642.4  bits: 313.4 E(32554): 3.7e-85
Smith-Waterman score: 3362; 100.0% identity (100.0% similar) in 495 aa overlap (1-495:1-495)

               10        20        30        40        50        60
pF1KA1 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 ALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 ASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 KEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 GVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 GEETKSASNVPSGKSTDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GEETKSASNVPSGKSTDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLRP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 TLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLSTVGGQQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLSTVGGQQP
              430       440       450       460       470       480

              490     
pF1KA1 PSLIGIQTDSQSSLH
       :::::::::::::::
CCDS31 PSLIGIQTDSQSSLH
              490     

>>CCDS44312.1 RCOR3 gene_id:55758|Hs108|chr1              (553 aa)
 initn: 3362 init1: 3362 opt: 3362  Z-score: 1641.7  bits: 313.4 E(32554): 4e-85
Smith-Waterman score: 3362; 100.0% identity (100.0% similar) in 495 aa overlap (1-495:59-553)

                                             10        20        30
pF1KA1                               MRVGAEYQARIPEFDPGATKYTDKDNGGML
                                     ::::::::::::::::::::::::::::::
CCDS44 GGSGASSTNGGLHYSEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKDNGGML
       30        40        50        60        70        80        

               40        50        60        70        80        90
pF1KA1 VWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWT
       90       100       110       120       130       140        

              100       110       120       130       140       150
pF1KA1 VEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANR
      150       160       170       180       190       200        

              160       170       180       190       200       210
pF1KA1 HNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHS
      210       220       230       240       250       260        

              220       230       240       250       260       270
pF1KA1 QRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKM
      270       280       290       300       310       320        

              280       290       300       310       320       330
pF1KA1 EGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVN
      330       340       350       360       370       380        

              340       350       360       370       380       390
pF1KA1 YRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQTPQAPRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQTPQAPRT
      390       400       410       420       430       440        

              400       410       420       430       440       450
pF1KA1 LGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQ
      450       460       470       480       490       500        

              460       470       480       490     
pF1KA1 PPPPLIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSLH
       :::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PPPPLIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSLH
      510       520       530       540       550   

>>CCDS44314.1 RCOR3 gene_id:55758|Hs108|chr1              (449 aa)
 initn: 2557 init1: 2557 opt: 2557  Z-score: 1255.6  bits: 241.7 E(32554): 1.3e-63
Smith-Waterman score: 2557; 100.0% identity (100.0% similar) in 381 aa overlap (1-381:59-439)

                                             10        20        30
pF1KA1                               MRVGAEYQARIPEFDPGATKYTDKDNGGML
                                     ::::::::::::::::::::::::::::::
CCDS44 GGSGASSTNGGLHYSEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKDNGGML
       30        40        50        60        70        80        

               40        50        60        70        80        90
pF1KA1 VWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWT
       90       100       110       120       130       140        

              100       110       120       130       140       150
pF1KA1 VEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANR
      150       160       170       180       190       200        

              160       170       180       190       200       210
pF1KA1 HNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHS
      210       220       230       240       250       260        

              220       230       240       250       260       270
pF1KA1 QRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKM
      270       280       290       300       310       320        

              280       290       300       310       320       330
pF1KA1 EGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVN
      330       340       350       360       370       380        

              340       350       360       370       380       390
pF1KA1 YRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQTPQAPRT
       :::::::::::::::::::::::::::::::::::::::::::::::::::         
CCDS44 YRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEVCLCMEFEL
      390       400       410       420       430       440        

              400       410       420       430       440       450
pF1KA1 LGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQ
                                                                   
CCDS44 I                                                           
                                                                   

>>CCDS44313.1 RCOR3 gene_id:55758|Hs108|chr1              (436 aa)
 initn: 2073 init1: 2044 opt: 2047  Z-score: 1010.4  bits: 196.3 E(32554): 5.9e-50
Smith-Waterman score: 2047; 98.7% identity (99.0% similar) in 306 aa overlap (1-306:59-364)

                                             10        20        30
pF1KA1                               MRVGAEYQARIPEFDPGATKYTDKDNGGML
                                     ::::::::::::::::::::::::::::::
CCDS44 GGSGASSTNGGLHYSEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKDNGGML
       30        40        50        60        70        80        

               40        50        60        70        80        90
pF1KA1 VWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWT
       90       100       110       120       130       140        

              100       110       120       130       140       150
pF1KA1 VEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANR
      150       160       170       180       190       200        

              160       170       180       190       200       210
pF1KA1 HNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHS
      210       220       230       240       250       260        

              220       230       240       250       260       270
pF1KA1 QRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKM
      270       280       290       300       310       320        

              280       290       300       310       320       330
pF1KA1 EGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVN
       :::::::::::::::::::::::::::::::.   :                        
CCDS44 EGGIEEFKPPESNQKINARWTTEEQLLAVQGTDPTGSSDTGSITSCPIIHSNTNSPYCHS
      330       340       350       360       370       380        

              340       350       360       370       380       390
pF1KA1 YRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQTPQAPRT
                                                                   
CCDS44 EPASTTSSSNTACCPGSSPAASSTPAAGSVHPAPANFKSASTTSYSPC            
      390       400       410       420       430                  

>>CCDS8052.1 RCOR2 gene_id:283248|Hs108|chr11             (523 aa)
 initn: 1570 init1: 756 opt: 1674  Z-score: 829.7  bits: 163.1 E(32554): 6.8e-40
Smith-Waterman score: 1898; 60.3% identity (80.2% similar) in 491 aa overlap (1-485:46-513)

                                             10         20         
pF1KA1                               MRVGAEYQARIPEFDP-GATKYTDKDNGGM
                                     .:::..::: :::  : . ..:..:.  ::
CCDS80 SRSRAKTVPNGGQPHSEDDSSEEEHSHDSMIRVGTNYQAVIPECKPESPARYSNKELKGM
          20        30        40        50        60        70     

      30        40        50        60        70        80         
pF1KA1 LVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEW
       ::::: : . :::::.:::.::::::::.:::::::.::::..::::::: :::::::::
CCDS80 LVWSPNHCVSDAKLDKYIAMAKEKHGYNIEQALGMLLWHKHDVEKSLADLANFTPFPDEW
          80        90       100       110       120       130     

      90       100       110       120       130       140         
pF1KA1 TVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLAN
       ::::::::::::.:::: :.::::::::: : :::::::::::::::::.::::::.:..
CCDS80 TVEDKVLFEQAFGFHGKCFQRIQQMLPDKLIPSLVKYYYSWKKTRSRTSVMDRQARRLGG
         140       150       160       170       180       190     

     150       160       170        180       190       200        
pF1KA1 RHNQGDSDDDVEETHPMDGNDSDYDPKK-EAKKEGNTEQPVQTSKIGLGRREYQSLQHRH
       :... :::. .:: .   :. :. .:   . :.:    .:.. .. : :..: :  :.::
CCDS80 RKDKEDSDE-LEEGR---GGVSEGEPDPADPKREPLPSRPLN-ARPGPGKKEVQVSQYRH
         200           210       220       230        240       250

      210       220       230       240       250       260        
pF1KA1 HSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQ
       :  :.. ::::::::. : ..::: ::. ::  :: :: .:::::::::. ::.::.:.:
CCDS80 HPLRTRRRPPKGMYLSPEGLTAVSGSPDLANLTLRGLDSQLISLKRQVQSMKQTNSSLRQ
              260       270       280       290       300       310

      270       280       290       300       310       320        
pF1KA1 KMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFF
        .::::. ..:::.: :.:.::::.:::::::..:.::::: :::.::::::. :::.::
CCDS80 ALEGGIDPLRPPEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFF
              320       330       340       350       360       370

      330       340       350       360       370       380        
pF1KA1 VNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQ----T
       :.::::::::::::::::::  ... : : .  ::.. .. .:.  . .:..:.:    .
CCDS80 VSYRRRFNLEEVLQEWEAEQ--DGAPG-APVPMEEARRGAPLPA-PALEEDDEVQITSVS
              380       390          400       410        420      

          390       400       410       420       430       440    
pF1KA1 PQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQP
        ..::.. :.:: :   : ::    .:.:::::::: ::.::.: :::::::: .::.::
CCDS80 TSVPRSVPPAPPPP---PPPT----SLSQPPPLLRPPLPTAPTLLRQPPPLQQ-GRFLQP
        430       440              450       460       470         

          450       460       470       480       490     
pF1KA1 RPTLNQPPPPLIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSLH
       : . ::::::::::: . : : . ::     : : ::.:::          
CCDS80 RLAPNQPPPPLIRPALAAP-RHSARP-----GPQPPPTLIGTPLEPPAPSL
      480       490        500            510       520   

>>CCDS9974.2 RCOR1 gene_id:23186|Hs108|chr14              (485 aa)
 initn: 1567 init1: 759 opt: 909  Z-score: 462.0  bits: 94.9 E(32554): 2.1e-19
Smith-Waterman score: 1616; 64.6% identity (84.4% similar) in 384 aa overlap (1-382:105-474)

                                             10          20        
pF1KA1                               MRVGAEYQARIPEFDPG--ATKYTDKDNGG
                                     :::: .::: .:.:::.  : .  ..:: :
CCDS99 AAAPNGNSSSNSWEEGSSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAKLARRSQERDNLG
           80        90       100       110       120       130    

       30        40        50        60        70        80        
pF1KA1 MLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDE
       :::::: ... .:::::::::::::::::.::::::::::::::::::::::::::::::
CCDS99 MLVWSPNQNLSEAKLDEYIAIAKEKHGYNMEQALGMLFWHKHNIEKSLADLPNFTPFPDE
          140       150       160       170       180       190    

       90       100       110       120       130       140        
pF1KA1 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLA
       ::::::::::::::::::.:::::::::::.::::::.::::::::..::.:::.:::  
CCDS99 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARK--
          200       210       220       230       240       250    

      150       160       170       180       190       200        
pF1KA1 NRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRH
       ..... .:.:..::..  .  : . : .::.:::     :..:  .   ..: .: : ..
CCDS99 QKREREESEDELEEANGNNPIDIEVDQNKESKKE---VPPTET--VPQVKKEKHSTQAKN
            260       270       280          290         300       

      210       220       230       240       250       260        
pF1KA1 HSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQ
          :.: .:::::.:.:::: ::: . .::.:.::::::::.:.:::.:: ::.:::::.
CCDS99 ---RAKRKPPKGMFLSQEDVEAVSANATAATTVLRQLDMELVSVKRQIQNIKQTNSALKE
          310       320       330       340       350       360    

      270       280       290       300       310       320        
pF1KA1 KMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFF
       :..:::: .. ::  :: ::::::::::::::..::::.:::::.::::::.: ::::::
CCDS99 KLDGGIEPYRLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFF
          370       380       390       400       410       420    

      330       340       350       360       370       380        
pF1KA1 VNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQTPQAP
       ::::::::..:::::::::.: . .:: ..   . .:: .:  : :  .::.::      
CCDS99 VNYRRRFNIDEVLQEWEAEHGKEETNGPSNQ--KPVKSPDN--SIKMPEEEDEAPVLDVR
          430       440       450         460         470       480

      390       400       410       420       430       440        
pF1KA1 RTLGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTL
                                                                   
CCDS99 YASAS                                                       
                                                                   




495 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 01:29:21 2016 done: Fri Nov  4 01:29:21 2016
 Total Scan time:  3.820 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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