Result of FASTA (ccds) for pF1KB7643
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7643, 299 aa
  1>>>pF1KB7643 299 - 299 aa - 299 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7255+/-0.00063; mu= 20.0636+/- 0.038
 mean_var=70.5577+/-14.157, 0's: 0 Z-trim(112.5): 37  B-trim: 163 in 1/49
 Lambda= 0.152687
 statistics sampled from 13203 (13240) to 13203 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.407), width:  16
 Scan time:  2.570

The best scores are:                                      opt bits E(32554)
CCDS46811.1 ZDHHC3 gene_id:51304|Hs108|chr3        ( 299) 2135 478.5 2.6e-135
CCDS2724.1 ZDHHC3 gene_id:51304|Hs108|chr3         ( 327) 1471 332.3   3e-91
CCDS10950.1 ZDHHC7 gene_id:55625|Hs108|chr16       ( 308) 1366 309.1 2.6e-84
CCDS45538.1 ZDHHC7 gene_id:55625|Hs108|chr16       ( 345) 1012 231.2 8.4e-61
CCDS6475.1 ZDHHC21 gene_id:340481|Hs108|chr9       ( 265)  444 106.0 3.2e-23
CCDS47810.1 ZDHHC2 gene_id:51201|Hs108|chr8        ( 367)  348 85.0 9.5e-17
CCDS73551.1 ZDHHC20 gene_id:253832|Hs108|chr13     ( 292)  337 82.5 4.3e-16
CCDS45017.1 ZDHHC20 gene_id:253832|Hs108|chr13     ( 354)  337 82.5 4.9e-16
CCDS81758.1 ZDHHC20 gene_id:253832|Hs108|chr13     ( 365)  337 82.5 5.1e-16
CCDS55454.1 ZDHHC15 gene_id:158866|Hs108|chrX      ( 328)  331 81.2 1.2e-15
CCDS14430.1 ZDHHC15 gene_id:158866|Hs108|chrX      ( 337)  331 81.2 1.2e-15
CCDS35395.1 ZDHHC9 gene_id:51114|Hs108|chrX        ( 364)  329 80.8 1.7e-15
CCDS7463.1 ZDHHC16 gene_id:84287|Hs108|chr10       ( 296)  325 79.8 2.7e-15
CCDS7461.1 ZDHHC16 gene_id:84287|Hs108|chr10       ( 361)  325 79.9 3.1e-15
CCDS43190.1 ZDHHC19 gene_id:131540|Hs108|chr3      ( 309)  323 79.4 3.8e-15
CCDS6909.1 ZDHHC12 gene_id:84885|Hs108|chr9        ( 267)  300 74.3 1.1e-13
CCDS7965.1 ZDHHC5 gene_id:25921|Hs108|chr11        ( 715)  301 74.9   2e-13
CCDS13776.1 ZDHHC8 gene_id:29801|Hs108|chr22       ( 765)  298 74.2 3.3e-13
CCDS54502.1 ZDHHC8 gene_id:29801|Hs108|chr22       ( 778)  298 74.3 3.4e-13
CCDS44946.1 ZDHHC17 gene_id:23390|Hs108|chr12      ( 632)  293 73.1 6.2e-13
CCDS7574.1 ZDHHC6 gene_id:64429|Hs108|chr10        ( 413)  285 71.1 1.6e-12
CCDS47510.1 ZDHHC14 gene_id:79683|Hs108|chr6       ( 473)  283 70.7 2.3e-12
CCDS5252.1 ZDHHC14 gene_id:79683|Hs108|chr6        ( 488)  283 70.8 2.4e-12
CCDS7460.1 ZDHHC16 gene_id:84287|Hs108|chr10       ( 377)  280 70.0 3.1e-12
CCDS44551.1 ZDHHC13 gene_id:54503|Hs108|chr11      ( 492)  270 67.9 1.7e-11
CCDS44550.1 ZDHHC13 gene_id:54503|Hs108|chr11      ( 622)  270 68.0 2.1e-11
CCDS30650.1 ZDHHC18 gene_id:84243|Hs108|chr1       ( 388)  265 66.7 3.1e-11
CCDS76335.1 ZDHHC6 gene_id:64429|Hs108|chr10       ( 409)  259 65.4 8.2e-11


>>CCDS46811.1 ZDHHC3 gene_id:51304|Hs108|chr3             (299 aa)
 initn: 2135 init1: 2135 opt: 2135  Z-score: 2542.8  bits: 478.5 E(32554): 2.6e-135
Smith-Waterman score: 2135; 100.0% identity (100.0% similar) in 299 aa overlap (1-299:1-299)

               10        20        30        40        50        60
pF1KB7 MMLIPTHHFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MMLIPTHHFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 VVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 KPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 LISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVH
              190       200       210       220       230       240

              250       260       270       280       290         
pF1KB7 SICTDETGIEQLKKEERRWAKKTKWMNMKAVFGHPFSLGWASPFATPDQGKADPYQYVV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SICTDETGIEQLKKEERRWAKKTKWMNMKAVFGHPFSLGWASPFATPDQGKADPYQYVV
              250       260       270       280       290         

>>CCDS2724.1 ZDHHC3 gene_id:51304|Hs108|chr3              (327 aa)
 initn: 1471 init1: 1471 opt: 1471  Z-score: 1751.8  bits: 332.3 E(32554): 3e-91
Smith-Waterman score: 2064; 91.1% identity (91.4% similar) in 327 aa overlap (1-299:1-327)

               10        20        30        40        50        60
pF1KB7 MMLIPTHHFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MMLIPTHHFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 VVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 VVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 KPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 KPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIA
              130       140       150       160       170       180

              190       200                                   210  
pF1KB7 LISLHALIMVGFHFLHCFEEDWT----------------------------KCSSFSPPT
       :::::::::::::::::::::::                            .::::::::
CCDS27 LISLHALIMVGFHFLHCFEEDWTTYGLNREEMAETGISLHEKMQPLNFSSTECSSFSPPT
              190       200       210       220       230       240

            220       230       240       250       260       270  
pF1KB7 TVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWMNMKAVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWMNMKAVF
              250       260       270       280       290       300

            280       290         
pF1KB7 GHPFSLGWASPFATPDQGKADPYQYVV
       :::::::::::::::::::::::::::
CCDS27 GHPFSLGWASPFATPDQGKADPYQYVV
              310       320       

>>CCDS10950.1 ZDHHC7 gene_id:55625|Hs108|chr16            (308 aa)
 initn: 1361 init1: 1361 opt: 1366  Z-score: 1627.1  bits: 309.1 E(32554): 2.6e-84
Smith-Waterman score: 1366; 64.9% identity (85.5% similar) in 282 aa overlap (7-284:6-287)

               10           20        30         40        50      
pF1KB7 MMLIPTHHFRNIERKP---EYLQPEKCVPPPYPGPVGT-MWFIRDGCGIACAIVTWFLVL
             :..:..:..:   :  . ..       . :.  .::::::::. ::..::.:: 
CCDS10  MQPSGHRLRDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVA
                10        20        30        40        50         

         60        70        80        90       100       110      
pF1KB7 YAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIE
       ::.::: ::::.::.:. ::..::..:: :: :::.:: :.::::::::::::::::..:
CCDS10 YADFVVTFVMLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYME
      60        70        80        90       100       110         

        120       130       140       150       160       170      
pF1KB7 SLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFT
       :::::::.:.::::::: :::.::::::.:::::::::::::::::::::.::..:::::
CCDS10 SLQLKPGEVIYKCPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFT
     120       130       140       150       160       170         

        180       190       200       210       220       230      
pF1KB7 MYIALISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFG
       ::::: :.::::. ::.:. : . .::.::.:::: ::::::.::.:::::. ::.::::
CCDS10 MYIALSSVHALILCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLLFFTFTAVMFG
     180       190       200       210       220       230         

        240       250       260       270       280       290      
pF1KB7 TQVHSICTDETGIEQLKKEERRWAKKTKWMNMKAVFGHPFSLGWASPFATPDQGKADPYQ
       ::.::::.::: ::.::.:.  : .. .: .::.::: : :: : .::            
CCDS10 TQIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTRP
     240       250       260       270       280       290         

                
pF1KB7 YVV      
                
CCDS10 RKGGPEFSV
     300        

>>CCDS45538.1 ZDHHC7 gene_id:55625|Hs108|chr16            (345 aa)
 initn: 1347 init1: 1012 opt: 1012  Z-score: 1205.0  bits: 231.2 E(32554): 8.4e-61
Smith-Waterman score: 1277; 61.9% identity (78.3% similar) in 286 aa overlap (36-284:39-324)

          10        20        30        40        50        60     
pF1KB7 THHFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFV
                                     .::::::::. ::..::.:: ::.::: ::
CCDS45 RDVEHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAYADFVVTFV
       10        20        30        40        50        60        

          70        80        90       100                         
pF1KB7 MLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDP-----------------------
       ::.::.:. ::..::..:: :: :::.:: :.:::::                       
CCDS45 MLLPSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPEKSSDCRPSACTVKTGLDPTLVG
       70        80        90       100       110       120        

                          110       120       130       140        
pF1KB7 --------------GAVPKGNATKEFIESLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKR
                     :::::::::::..::::::::.:.::::::: :::.::::::.:::
CCDS45 ICGEGTESVQSLLLGAVPKGNATKEYMESLQLKPGEVIYKCPKCCCIKPERAHHCSICKR
      130       140       150       160       170       180        

      150       160       170       180       190       200        
pF1KB7 CIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIMVGFHFLHCFEEDWTKCSSF
       ::::::::::::::::::.::..:::::::::: :.::::. ::.:. : . .::.::.:
CCDS45 CIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGFQFISCVRGQWTECSDF
      190       200       210       220       230       240        

      210       220       230       240       250       260        
pF1KB7 SPPTTVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWMNM
       ::: ::::::.::.:::::. ::.::::::.::::.::: ::.::.:.  : .. .: .:
CCDS45 SPPITVILLIFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSEKPTWERRLRWEGM
      250       260       270       280       290       300        

      270       280       290               
pF1KB7 KAVFGHPFSLGWASPFATPDQGKADPYQYVV      
       :.::: : :: : .::                     
CCDS45 KSVFGGPPSLLWMNPFVGFRFRRLPTRPRKGGPEFSV
      310       320       330       340     

>>CCDS6475.1 ZDHHC21 gene_id:340481|Hs108|chr9            (265 aa)
 initn: 454 init1: 333 opt: 444  Z-score: 530.3  bits: 106.0 E(32554): 3.2e-23
Smith-Waterman score: 445; 29.9% identity (57.8% similar) in 268 aa overlap (38-297:7-261)

        10        20        30        40        50        60       
pF1KB7 HFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFVML
                                     :. :  :  :  .  :. ::   ..  ..:
CCDS64                         MGLRIHFVVDPHGWCCMGLIVFVWLYNIVLIPKIVL
                                       10        20        30      

        70          80        90       100           110       120 
pF1KB7 IPSRD--YVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKG----NATKEFIESLQLK
       .:  .  .. .:.  :.:  .... :..  :: .:::: .:..    .. .:: :     
CCDS64 FPHYEEGHIPGILI-IIFYGISIFCLVALVRASITDPGRLPENPKIPHGEREFWEL----
         40        50         60        70        80        90     

             130       140       150       160       170       180 
pF1KB7 PGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIAL
              : ::  ..: :.:::: : .:.:.:::::::.::::::.:.  :. . .:  :
CCDS64 -------CNKCNLMRPKRSHHCSRCGHCVRRMDHHCPWINNCVGEDNHWLFLQLCFYTEL
                    100       110       120       130       140    

             190       200       210       220       230       240 
pF1KB7 ISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVHS
       .. .::..   :. . .     . . :     . .. :  : :. .:.  . .: ::. .
CCDS64 LTCYALMFSFCHYYYFLPLKKRNLDLFVFRHELAIMRLAAFMGITMLVGITGLFYTQLIG
          150       160       170       180       190       200    

             250         260       270       280       290         
pF1KB7 ICTDETGIEQLKK--EERRWAKKTKWMNMKAVFGHPFSLGWASPFATPDQGKADPYQYVV
       : :: :.::....  :.    .:   .... :::  ... :  ::    :    ::..  
CCDS64 IITDTTSIEKMSNCCEDISRPRKPWQQTFSEVFGTRWKILWFIPF-RQRQPLRVPYHFAN
          210       220       230       240        250       260   

CCDS64 HV
         

>>CCDS47810.1 ZDHHC2 gene_id:51201|Hs108|chr8             (367 aa)
 initn: 333 init1: 277 opt: 348  Z-score: 414.2  bits: 85.0 E(32554): 9.5e-17
Smith-Waterman score: 348; 32.4% identity (56.4% similar) in 204 aa overlap (106-294:99-294)

          80        90       100       110               120       
pF1KB7 SIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIES--------LQLKPGQVVY
                                     :.:.: .: ..          .   : . :
CCDS47 SYWKTIFTLPMNPSKEFHLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRY
       70        80        90       100       110       120        

       130       140       150       160       170       180       
pF1KB7 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHAL
        : .:  ::::: :::::: .:: :::::::::::::: .: :.:.::  :    ::   
CCDS47 -CDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAY----SLLYC
       130       140       150       160       170           180   

       190       200       210       220       230       240       
pF1KB7 IMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVHSICTDET
       ....   :. : . ::  ...    . . ...: : . .: .  : .:: .   .  ...
CCDS47 LFIAATDLQYFIKFWT--NGLPDTQAKFHIMFLFFAAAMFSVSLSSLFGYHCWLVSKNKS
           190         200       210       220       230       240 

       250        260            270       280        290          
pF1KB7 GIEQLKKEE-RRWAKKTKWM-----NMKAVFGHPFSLGWASP-FATPDQGKADPYQYVV 
        .: ...   :. . :. .      ::. :::   .  :  : :..  .: . :      
CCDS47 TLEAFRSPVFRHGTDKNGFSLGFSKNMRQVFGDEKKY-WLLPIFSSLGDGCSFPTCLVNQ
             250       260       270        280       290       300

CCDS47 DPEQASTPAGLNSTAKNLENHQFPAKPLRESQSHLLTDSQSWTESSINPGKCKAGMSNPA
              310       320       330       340       350       360

>>CCDS73551.1 ZDHHC20 gene_id:253832|Hs108|chr13          (292 aa)
 initn: 366 init1: 314 opt: 337  Z-score: 402.4  bits: 82.5 E(32554): 4.3e-16
Smith-Waterman score: 337; 33.5% identity (58.2% similar) in 182 aa overlap (124-298:60-234)

           100       110       120       130       140       150   
pF1KB7 HCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKM
                                     ...  : ::  ::::::::::.:  :: ::
CCDS73 RYEKEFSQERQQEILRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKM
      30        40        50        60        70        80         

           160       170       180       190       200       210   
pF1KB7 DHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIMVGFHFLHCFEEDWTKCSSFSPPTT
       :::::::::::: .: :.:.:: .:    ::   ..:.   :. : . ::  . ..   .
CCDS73 DHHCPWVNNCVGFSNYKFFLLFLLY----SLLYCLFVAATVLEYFIKFWT--NELTDTRA
      90       100       110           120       130         140   

           220       230       240       250       260             
pF1KB7 VILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWM------N
        . ...: : . .:.: .  .:. .   .  ..: ::...     ..   . .      :
CCDS73 KFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRAPTFSYGPDGNGFSLGCSKN
           150       160       170       180       190       200   

       270       280        290                                    
pF1KB7 MKAVFGHPFSLGWASP-FATPDQGKADPYQYVV                           
        . :::   .  :  : :..  .: . : . :                            
CCDS73 WRQVFGDEKKY-WLLPIFSSLGDGCSFPTRLVGMDPEQASVTNQNEYARSSGSNQPFPIK
           210        220       230       240       250       260  

CCDS73 PLSESKNRLLDSESQWLENGAEEGIVKSGV
            270       280       290  

>>CCDS45017.1 ZDHHC20 gene_id:253832|Hs108|chr13          (354 aa)
 initn: 347 init1: 314 opt: 337  Z-score: 401.3  bits: 82.5 E(32554): 4.9e-16
Smith-Waterman score: 338; 28.4% identity (53.1% similar) in 292 aa overlap (49-298:13-297)

       20        30        40        50        60        70        
pF1KB7 LQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFVMLIPSRDY-VYSI
                                     .: :  ::.  :::.. .     .  :..:
CCDS45                   MAPWTLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTI
                                 10        20        30        40  

            80              90       100           110         120 
pF1KB7 I----NG------IVFNLLAFLALASHCRAMLTDPGAVPK----GNATKEFIESL--QLK
       .    ::      ..:.:.  . . :.  ...:.:..  :    .:. ::  :.   : .
CCDS45 FGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQER
             50        60        70        80        90       100  

                               130       140       150       160   
pF1KB7 PGQVVYK------------------CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNC
         ... .                  : ::  ::::::::::.:  :: ::::::::::::
CCDS45 QQEILRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNC
            110       120       130       140       150       160  

           170       180       190       200       210       220   
pF1KB7 VGENNQKYFVLFTMYIALISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFE
       :: .: :.:.:: .:    ::   ..:.   :. : . ::  . ..   . . ...: : 
CCDS45 VGFSNYKFFLLFLLY----SLLYCLFVAATVLEYFIKFWT--NELTDTRAKFHVLFLFFV
            170           180       190         200       210      

           230       240       250       260             270       
pF1KB7 GLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWM------NMKAVFGHPFS
       . .:.: .  .:. .   .  ..: ::...     ..   . .      : . :::   .
CCDS45 SAMFFISVLSLFSYHCWLVGKNRTTIESFRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKK
        220       230       240       250       260       270      

       280        290                                              
pF1KB7 LGWASP-FATPDQGKADPYQYVV                                     
         :  : :..  .: . : . :                                      
CCDS45 Y-WLLPIFSSLGDGCSFPTRLVGMDPEQASVTNQNEYARSGSNQPFPIKPLSESKNRLLD
         280       290       300       310       320       330     

>>CCDS81758.1 ZDHHC20 gene_id:253832|Hs108|chr13          (365 aa)
 initn: 347 init1: 314 opt: 337  Z-score: 401.1  bits: 82.5 E(32554): 5.1e-16
Smith-Waterman score: 338; 28.4% identity (53.1% similar) in 292 aa overlap (49-298:13-297)

       20        30        40        50        60        70        
pF1KB7 LQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFVMLIPSRDY-VYSI
                                     .: :  ::.  :::.. .     .  :..:
CCDS81                   MAPWTLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTI
                                 10        20        30        40  

            80              90       100           110         120 
pF1KB7 I----NG------IVFNLLAFLALASHCRAMLTDPGAVPK----GNATKEFIESL--QLK
       .    ::      ..:.:.  . . :.  ...:.:..  :    .:. ::  :.   : .
CCDS81 FGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQER
             50        60        70        80        90       100  

                               130       140       150       160   
pF1KB7 PGQVVYK------------------CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNC
         ... .                  : ::  ::::::::::.:  :: ::::::::::::
CCDS81 QQEILRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNC
            110       120       130       140       150       160  

           170       180       190       200       210       220   
pF1KB7 VGENNQKYFVLFTMYIALISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFE
       :: .: :.:.:: .:    ::   ..:.   :. : . ::  . ..   . . ...: : 
CCDS81 VGFSNYKFFLLFLLY----SLLYCLFVAATVLEYFIKFWT--NELTDTRAKFHVLFLFFV
            170           180       190         200       210      

           230       240       250       260             270       
pF1KB7 GLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWM------NMKAVFGHPFS
       . .:.: .  .:. .   .  ..: ::...     ..   . .      : . :::   .
CCDS81 SAMFFISVLSLFSYHCWLVGKNRTTIESFRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKK
        220       230       240       250       260       270      

       280        290                                              
pF1KB7 LGWASP-FATPDQGKADPYQYVV                                     
         :  : :..  .: . : . :                                      
CCDS81 Y-WLLPIFSSLGDGCSFPTRLVGMDPEQASVTNQNEYARSSGSNQPFPIKPLSESKNRLL
         280       290       300       310       320       330     

>>CCDS55454.1 ZDHHC15 gene_id:158866|Hs108|chrX           (328 aa)
 initn: 273 init1: 273 opt: 331  Z-score: 394.6  bits: 81.2 E(32554): 1.2e-15
Smith-Waterman score: 331; 32.0% identity (57.5% similar) in 181 aa overlap (123-296:117-289)

            100       110       120       130       140       150  
pF1KB7 SHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRK
                                     : : . : .:  ::::: ::::::  :. :
CCDS55 RYENEERPEVQKQMLVDMAKKLPVYTRTGSGAVRF-CDRCHLIKPDRCHHCSVCAMCVLK
         90       100       110       120        130       140     

            160       170       180       190       200       210  
pF1KB7 MDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIMVGFHFLHCFEEDWTKCSSFSPPT
       :::::::::::.: .: :.:. :  : .:  :.    :  .:.. .. .    :  :   
CCDS55 MDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYWRGELP--SVRSKFH
         150       160       170       180       190         200   

            220       230       240       250             260      
pF1KB7 TVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIEQL------KKEERRWAKKTKWM
       ...::.. :    .:..   ..:: .   .  ..: .: .      .  :.   .     
CCDS55 VLFLLFVAC----MFFVSLVILFGYHCWLVSRNKTTLEAFCTPVFTSGPEKNGFNLGFIK
           210           220       230       240       250         

        270       280        290                                   
pF1KB7 NMKAVFGHPFSLGWASPF-ATPDQGKADPYQYVV                          
       :.. :::   .. :  :. ..: .:.. :..                             
CCDS55 NIQQVFGDKKKF-WLIPIGSSPGDGHSFPMRSMNESQNPLLANEETWEDNEDDNQDYPEG
     260       270        280       290       300       310        

CCDS55 SSSLAVETET
      320        




299 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 09:53:16 2016 done: Sat Nov  5 09:53:16 2016
 Total Scan time:  2.570 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com