GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:58:51

Sequence gi568815584f:58538203_58747131 : 208929 bp : 41.12% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1883   1934   52  1  1   55  110    27 0.447   2.97
 1.02 Term +   9579   9730  152  1  2   99   47   179 0.525  11.99
 1.03 PlyA +   9858   9863    6                               1.05

 2.03 PlyA -  10190  10185    6                               1.05
 2.02 Term -  21381  21005  377  1  2   55   37   163 0.029   1.82
 2.01 Init -  41993  41795  199  2  1   83   64    85 0.468   4.71
 2.00 Prom -  42171  42132   40                              -4.25

 3.00 Prom +  49903  49942   40                              -5.75
 3.01 Init +  53095  53829  735  0  0   55   86   307 0.216  22.00
 3.02 Intr +  57945  58049  105  2  0   83   79    29 0.211   0.99
 3.03 Intr +  59659  59815  157  0  1   50   77    98 0.188   3.56
 3.04 Intr +  67939  68094  156  2  0   63   45   100 0.029   2.26
 3.05 Intr +  89745  89849  105  1  0   35   86    72 0.001   0.97
 3.06 Intr +  95696  95983  288  0  0   39   86   159 0.117   7.09
 3.07 Intr +  99903 100396  494  1  2   52   36   468 0.058  29.79
 3.08 Intr + 102534 102666  133  2  1   89  109   142 0.999  15.70
 3.09 Intr + 103390 103545  156  2  0   92  110    53 0.967   6.96
 3.10 Intr + 107056 108926 1871  2  2   59    6  1357 0.006 110.97
 3.11 Intr + 125488 125631  144  0  0   78   37    90 0.009   2.46
 3.12 Term + 139754 139870  117  1  0   98   42    64 0.021   0.36
 3.13 PlyA + 140028 140033    6                               1.05

 4.09 PlyA - 140850 140845    6                               1.05
 4.08 Term - 141949 141843  107  2  2   75   49   108 0.402   3.19
 4.07 Intr - 142940 142762  179  1  2   68   45    52 0.092  -2.46
 4.06 Intr - 149106 149007  100  1  1  124   40   112 0.148   8.25
 4.05 Intr - 149784 149610  175  0  1   37   46    82 0.365  -2.51
 4.04 Intr - 153853 153744  110  2  2  134  105   113 0.989  16.68
 4.03 Intr - 165703 165478  226  1  1   73   43   118 0.094   2.44
 4.02 Intr - 183944 183844  101  0  2   66   38   125 0.073   4.21
 4.01 Init - 185938 185737  202  1  1   85   34   117 0.667   5.09
 4.00 Prom - 186865 186826   40                              -6.95

 5.00 Prom + 191185 191224   40                              -5.25
 5.01 Init + 194898 194979   82  2  1   65   85    61 0.390   4.68
 5.02 Term + 199597 199820  224  2  2   59   47   205 0.961   9.60
 5.03 PlyA + 199887 199892    6                               1.05

 6.03 PlyA - 200699 200694    6                               1.05
 6.02 Term - 204573 204418  156  0  0   81   32   108 0.404   1.45
 6.01 Init - 207713 207708    6  2  0   93  100    10 0.578   3.06
 6.00 Prom - 208239 208200   40                              -3.35


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  80589  80395  195  1  0   88   62   156 0.826  11.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:58538203_58747131|GENSCAN_predicted_peptide_1|67_aa
MDRTQIELNPYLTCVFSGGKAVPLSASQMPPAKMSVMLPSVNLEDCSQSLSLSTMQEDME
SSGADTF

>gi568815584f:58538203_58747131|GENSCAN_predicted_CDS_1|204_bp
atggatcggacacaaattgagcttaatccgtacctcacatgtgtattttcaggtgggaaa
gcagtgccactctccgcttcacagatgccccctgccaagatgtcagtgatgctgccgtca
gtgaacctcgaggactgctctcagtctctgagtctcagcacaatgcaggaggacatggag
tcttcgggggcagataccttctga

>gi568815584f:58538203_58747131|GENSCAN_predicted_peptide_2|191_aa
MDEAGNHHSQQTNTRTENQTPHVLTHKWELNNENTWTQGREHHTMGPVSGWGSMGDMALR
EIPNVDAARNGEIPYARLTLLPVTIISSGQNIKTSCLKALENDQKQAETENTYTLKGGTQ
LVRSTFIQGTSHCLCAWMTHSCSSDSVAGLGGQNKYPELPERLKIEQKNRIKKRATDGGI
PNICIQTLSNS

>gi568815584f:58538203_58747131|GENSCAN_predicted_CDS_2|576_bp
atggatgaagctggaaatcatcattctcagcaaactaacacaagaacagaaaaccaaaca
cctcatgttctcactcataagtgggagttgaacaatgagaacacttggacacagggaagg
gaacatcacacaatggggcctgtcagtgggtgggggtctatgggagatatggcattaaga
gaaatacctaatgtagatgctgccaggaatggtgaaattccttatgccagactaaccctc
ctgccagtaacaattataagctctggacaaaatataaaaaccagttgtttgaaagcactg
gagaatgaccaaaagcaagcagaaactgagaatacttacactttgaaaggaggaacacag
ttggtgagatccacatttatccagggcacttcccattgcctgtgtgcatggatgacacac
tcatgcagcagtgacagtgttgctgggcttggaggtcagaacaagtatccagagctccca
gaaaggctaaaaattgagcagaaaaatcgcataaagaagagagctacagatggggggatc
cccaatatctgcatacagactctctcaaattcttag

>gi568815584f:58538203_58747131|GENSCAN_predicted_peptide_3|1486_aa
MCKSINVIHHINRTKDKNHMIISIDAEKAFDKIQQRFMLKTLNKLGIDGTYLEIIRAIYD
KPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNILLEVLARAIRQEKEIKGIQIGKEEV
KLSLFADDMIVYLENPIISAQNILKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMS
ELPFTVASKRIKYLGIQLTRDVKDLFKENYKPLFNEIEEDTNKWKNIPCSWVGRINIVKM
AILPKETEEGERTERVCARSCLPFKWLSYKSCNPRSSVFWMQADLAAWWLFVSNGFSGDE
FSGFTSLYREGTHQVRKAQSPGLLPFASSKAGDRPSAVSQLQIWADTIQPSCSVSRRRIS
FKINEDSQVQWLTSVITVLWDAEAGARCSVMHTGTPPRGAAEPSFPPSVLTEAAAGSWQG
ICTHGTLHLPSVKMTGRNGRAKGQKSEAGGDLITLISDYDGGECNSLPDILESLESTVLC
RRKQEPLEKLTTKLHGITLAFFNKNLFNSTKTQLKGRHEPTRGRSPSALLLRLGGPAAVT
ALAARLGAMKPSPAGTAKELEPPAPARGEQRTAEPEGRWREKGEADTERQRTRERQEATL
AGLAELEYLRQRQELLVRGALRGAGGAGAAAPRAGELLGEAAQRSRLEEKFLEENILLLR
KQLVGRARRWSTAVPAQGLENCLRRRDAGLLNQLQELDKQISDLRLDVEKTSEEHLETDS
RPSSGFYELSDGASGSLSNSSNSVFSECLSSCHSSTCFCSPLEATLSLSDGCPKSADLIG
LLEYKEGHCEDQASGAVCRSLSTPQFNSLDVIADVNPKYQCDLVSKNGNDVYRYPSPLHA
VAVQSPMFLLCLTGNPLREEDRLGNHASDICGGSELDAVKTDSSLPSPSSLWSASHPSSS
KKMDGYILSLVQKKTHPVRTNKPRTSVNADPTKGLLRNGSVCVRAPGGVSQGNSVNLKNS
KQACLPSGGIPSLNNGTFSPPKQWSKESKAEQAESKRVPLPEGCPSGAASDLQSKHLPKT
AKPASQEHARCSAIGTGESPKESAQLSGASPKESPSRGPAPPQENKVVQPLKKMSQKNSL
QGVPPATPPLLSTAFPVEERPALDFKSEGSSQSLEEAHLVKAQFIPGQQPSVRLHRGHRN
MGVVKNSSLKHRGPALQGLENGLPTVREKTRAGSKKCRFPDDLDTNKKLKKASSKGRKSG
GGPEAGVPGRPAGGGHRAGSRAHGHGREAVVAKPKHKRTDYRRWKSSAEISYEEALRRAR
RGRRENVGLYPAPVPLPYASPYAYVASDSEYSAECESLFHSTVVDTSEDEQSNYTTNCFG
DSESSVSEGEFVGESTTTSDSEESGGLIWSQFVQTLPIQTVTAPDLHNHPAKTFVKIKAS
HNLKKKILRFRSGSLKLMTTEAQVRASLKADGSGETTSGQQLVFCKQPSSARCLPVLQLV
LETKSSVKALSVAYFGRPSSVLKTTDAIHAVQHQGRQQSSYGTHQS

>gi568815584f:58538203_58747131|GENSCAN_predicted_CDS_3|4461_bp
atgtgcaaatcaataaacgtaatccatcacataaacagaaccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaggccttcgacaaaattcagcagcgcttcatgctaaaa
actctcaataaattaggtattgatgggacatatctcgaaataataagagctatttatgac
aaacccacagccaatatcatactgaatggccaaaaactggaagcattccctttgaaaacc
ggcacaagacaaggatgccctctctcaccactcctattcaacatactattggaagttctg
gccagggcaatcaggcaggagaaagaaataaagggtattcaaataggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatctagaaaaccccatcatctcagcc
caaaatatccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaagtcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacagttgcttcaaaaagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgttcaacgaaatagaagaggac
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatattgtgaaaatg
gccatactgcccaaggaaactgaagaaggagaaaggacagaaagagtgtgtgctagatcc
tgtcttccgttcaagtggctttcttacaaatcttgtaacccaaggtcctcagttttttgg
atgcaagcagatctggctgcctggtggctgtttgtttctaatggattcagtggagatgag
ttcagtgggttcaccagcttatacagagaagggactcaccaggtcagaaaagcccagagc
cctgggttgttgccttttgcatcttctaaggctggagatagaccctctgccgtgtctcag
ctacagatatgggccgacaccattcagccctcatgctcagtttcaagaaggcgaatctca
tttaagattaatgaagatagccaggtgcagtggctcacatctgtaatcacagtactttgg
gacgccgaagcaggtgcacggtgcagcgtgatgcatacagggacacccccccgtggtgca
gcagaaccaagttttcctccctctgttctgaccgaagcagctgctggcagttggcaaggt
atttgcacacatggaactctgcaccttccatctgtaaagatgaccggtagaaatggcaga
gctaagggacaaaagtctgaggctggtggagacttaatcaccttaatcagtgattacgac
ggtggggaatgcaactcacttccagacattctagaatctttggaatccacagtgctctgc
aggaggaagcaggagcctcttgaaaaacttaccaccaaacttcatggaatcaccctggcc
ttcttcaacaaaaacctctttaacagcactaaaacacagctaaaagggcggcatgagccc
acccgcggccgcagccctagcgccctgctcctccgcctgggcggcccggctgcggtgacg
gctctcgctgcccgactgggggccatgaagccgagtccggccgggacggcgaaggagctg
gagcctccggcgccggcccgaggcgagcagcgcacggcggagcccgaggggcgctggcgg
gagaagggcgaggcagacaccgagcggcagcgcacccgggagcggcaggaggccacgctg
gccgggctggcggagctggagtacctgcgccagcgccaagagctgctggtcaggggcgcc
ctgcgcggcgccgggggtgcgggagccgctgcgccccgcgctggggagctactgggggag
gcggcgcagcgcagtcgcctggaggagaagttcttggaggagaacatcttgctgctaaga
aagcaattggtaggtcgtgcccgaaggtggagcacggctgttcctgcccaggggctggag
aactgtttgaggcgaagagatgctggtttgttgaatcagttgcaagagcttgacaagcag
ataagtgacctgagactggatgtagaaaagacatctgaagagcacctggagacagacagt
cggcctagctcagggttttatgagctgagtgatggggcttcaggatccctttccaattcc
tctaactcggtgttcagtgagtgtttatccagttgtcattccagcacctgcttttgcagc
cccttggaggcgaccttgagtctctcagatggttgccccaaatctgcagatctcatagga
ttgttggaatataaagaaggccactgtgaagaccaggcctcaggggcagtttgccgttcc
ctctccacaccacaatttaattcccttgatgtcattgcagatgtgaatcccaagtaccag
tgtgatctggtgtctaaaaacgggaatgatgtatatcgctatcccagtccacttcatgct
gtggctgtgcagagcccaatgtttctcctttgtctgacgggcaaccctctgagggaagag
gacaggcttggaaaccatgccagtgacatttgcggtggatctgagctagatgccgtcaaa
acagacagttccttaccgtccccaagcagtctgtggtctgcttcccatccttcatccagc
aagaaaatggatggctacattctgagcctggtccagaaaaaaacacaccctgtaaggacc
aacaaaccaagaaccagcgtgaacgctgaccccacgaaagggcttctgaggaacgggagc
gtttgtgtcagagccccgggcggtgtctcacagggcaacagtgtgaaccttaagaattcg
aaacaggcgtgtctgccctctggcgggataccttctctgaacaatgggacattctcccca
ccgaagcagtggtcgaaagaatcaaaggccgaacaagccgaaagcaagagggtgcccctg
ccagagggctgcccctcaggcgctgcctccgaccttcagagtaagcacctgccaaaaacg
gccaagccagcctcgcaagaacatgctcggtgttccgccattgggacaggggagtcccct
aaggaaagcgctcagctctcaggggcctctccaaaagagagtcctagcagaggccctgcc
ccgccgcaggagaacaaagttgtacagcccctgaaaaagatgtcacagaaaaacagcctg
cagggcgtccccccggccactcctcccctgctgtctacagctttccccgtggaagagagg
cctgccttggatttcaagagcgagggctcttcccaaagcctggaggaagcgcacctggtc
aaggcccagtttatcccggggcagcagcccagtgtcaggctccaccggggccacaggaac
atgggcgtcgtgaagaactccagcctgaagcaccgcggcccagccctccaggggctggag
aacggcttgcccaccgtcagggagaaaacgcgggccgggagcaagaagtgtcgcttccca
gatgacttggatacaaataagaaactcaagaaagcctcctccaaggggaggaagagtggg
ggcgggcccgaggctggtgttcccggcaggcccgcgggcgggggccacagggcggggagc
agggcgcatggccacggacgggaggcggtggtggccaaacctaagcacaagcgaactgac
taccggcggtggaagtcctcggccgagatttcctacgaagaggccctgaggagggcccgg
cgcggtcgccgggagaatgtggggctgtaccccgcgcctgtgcctctgccctacgccagc
ccctacgcctacgtggctagcgactccgagtactcggccgagtgcgagtccctgttccac
tccaccgtggtggacaccagtgaggacgagcagagcaattacaccaccaactgcttcggg
gacagcgagtcgagtgtgagcgagggcgagttcgtgggggagagcacaaccaccagcgac
tctgaagaaagcgggggcttaatttggtcccagtttgtccagactctgcccattcaaacg
gtaacggccccagaccttcacaaccaccccgcaaaaacctttgtcaaaattaaggcctca
cataacctcaagaagaagatcctccgctttcggtctggctctttgaaactgatgacgacg
gaagcccaggtgagggcctctttaaaagcagatggctctggagaaaccacctcaggccag
cagctggtgttctgtaaacagccctcatctgccagatgcttgcctgttctccagttggtg
ttagagactaagagctctgtcaaagccctttcagtggcatactttggcagaccttcaagc
gtcctgaagaccactgatgccattcatgcagtccagcaccagggcagacagcagagttca
tatggcacacaccagagttaa

>gi568815584f:58538203_58747131|GENSCAN_predicted_peptide_4|399_aa
MDGYGGIKKNESMSFATTWVQLKAIILSELTQKQKTKYYMFSLISGSSTLSTRGHKEGNK
RHWGLFEDMSTNDVPGYVLRNGDKGEKADSGTNSLMGKDKQIMEEKQLSEESGFELGFEL
PEQYKSQRLSSQSPSFPLRIQAAGEREKKHKTEVSSCYTHNLTANCQGDIDLNHIKGTYS
HEGVASKAADMIPFQGLGLLVQIPTAKPIKARELPVLRNGQAHSKIHIEMQVTQKSQNSF
EKEEQSQRIYTPHFQNLLQSYSNQDSVIVVRAPGPIDHPKAEECRPTAWDWQASPPGATG
VGSTSFLFDLTISWKRALGLKIYKPLFVLILILLRCLAPNHKVEHYFNLGISTTPAYRGA
LKPLATSTRNQALPDESDRQDSYDRSHRCGKIEIQTVVN

>gi568815584f:58538203_58747131|GENSCAN_predicted_CDS_4|1200_bp
atggatggctatggaggcataaaaaagaatgaaagcatgtcctttgcaacaacatgggtg
cagctgaaggccattatcctaagtgaactaacacagaaacagaaaaccaaatattacatg
ttctcacttataagtgggagctcaacactgagtacacgtggacacaaagaaggcaacaaa
agacactggggcctgtttgaggatatgagcaccaatgatgtgccaggctatgtgctacgc
aatggagataaaggtgaaaaagcagactcagggaccaacagtctcatgggaaaagataag
caaataatggaggagaagcaattatctgaagagtcaggatttgagctgggatttgaactt
cctgagcaatacaagagtcaaaggttgagctcccaatcccccagcttcccactcagaatt
caggctgctggtgaaagagagaaaaagcataaaactgaggtctcgagttgctatactcat
aacctcacagcaaactgccaaggggacattgatctgaatcacattaaaggtacttactct
catgaaggtgttgcctccaaggcagctgacatgattcccttccagggtctaggccttctg
gtgcagattcccacagccaaacccataaaggccagagagctgcctgttttgagaaatggg
caagctcattctaaaattcatatagaaatgcaagtaacccagaagagccaaaatagtttt
gaaaaagaagaacaaagccagaggatttacactccccatttccaaaacttactacaaagc
tacagtaatcaagatagtgtgatagtggtgagagcacccggtcccatcgaccacccaaag
gctgaggagtgcaggcccacagcatgggactggcaggcatctccacctggggccacgggt
gtgggatccactagctttctctttgatctaacgatctcatggaaaagggcattagggctg
aaaatttataagcctctctttgtccttattctgatcctgcttcgctgcttagccccaaat
cataaagtagagcactatttcaatttgggtatcagcaccacacctgcttatcgtggagcg
cttaagccacttgctacatccaccaggaaccaagccctcccagatgagtctgacaggcag
gactcctatgaccgttctcacagatgtggaaaaatagaaattcagactgtagtcaactag

>gi568815584f:58538203_58747131|GENSCAN_predicted_peptide_5|101_aa
MGNLERTEIYILTILEAGTSKIKVPASAQLLSLFESVLLLLMRKKRVFVGQPQAGSLGGI
SEEGIVIIGDDSSVHVIAPEDLPVGQDVEVEDSDIDDLAPV

>gi568815584f:58538203_58747131|GENSCAN_predicted_CDS_5|306_bp
atgggtaacttagaaagaacagaaatttatattcttactattctggaagctggaacatcc
aagatcaaggtgccagcatctgcacagttgttgtcattatttgagagtgtactccttcta
cttatgcggaaaaaaagggtttttgtaggacagcctcaggcaggttctttaggtggtatt
tcagaagaaggcattgttatcataggagatgacagctctgtgcatgttattgcccctgaa
gaccttccagtgggacaagatgtggaggtggaagacagtgatattgatgatcttgcccct
gtgtag

>gi568815584f:58538203_58747131|GENSCAN_predicted_peptide_6|53_aa
MKVHRLKDHFCGNTGKNKKCNRNKPLLFPHALQSSSSTCIIEPNAEPAGKGEM

>gi568815584f:58538203_58747131|GENSCAN_predicted_CDS_6|162_bp
atgaaggtgcatagattaaaggaccatttttgtggcaacactggcaagaataaaaaatgc
aacaggaacaagcccctcctttttcctcatgccttacagtcttcctccagtacctgtatc
atagagcctaatgcagagccagctggtaaaggagaaatgtaa