GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:57:00

Sequence gi568815587r:27398652_27601922 : 203271 bp : 39.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  21789  21873   85  2  1   47   87    88 0.435   5.63
 1.02 Intr +  28640  28732   93  0  0   41   75    85 0.270   1.52
 1.03 Intr +  42141  42376  236  1  2   41   91   182 0.729  10.28
 1.04 Intr +  44619  44706   88  2  1   99   50    37 0.217  -0.38
 1.05 Term +  60595  60818  224  2  2   90   49    66 0.030  -1.00
 1.06 PlyA +  62743  62748    6                               1.05

 2.04 PlyA -  62987  62982    6                              -0.45
 2.03 Term -  64215  64148   68  1  2   83   41   105 0.359   2.42
 2.02 Intr -  65426  65341   86  1  2   56   47    66 0.224  -2.16
 2.01 Init -  73651  73467  185  1  2   91   68   415 0.981  36.44
 2.00 Prom -  79602  79563   40                              -5.05

 3.08 PlyA -  79617  79612    6                               1.05
 3.07 Term - 100153  99998  156  1  0   76   37   201 0.997  10.75
 3.06 Intr - 100917 100708  210  0  0   74   79   162 0.999  12.09
 3.05 Intr - 102915 102844   72  0  0   66   94    77 0.957   4.78
 3.04 Intr - 103269 103151  119  1  2   57  105    90 0.845   6.86
 3.03 Intr - 107804 107577  228  0  0   68   20   121 0.271   0.22
 3.02 Intr - 108114 108065   50  2  2   78  105   106 0.332   8.71
 3.01 Init - 123725 123634   92  2  2   66   13   148 0.234   5.11
 3.00 Prom - 125194 125155   40                              -4.65

 4.04 PlyA - 128394 128389    6                               1.05
 4.03 Term - 147543 147436  108  0  0   57   44   106 0.388   0.63
 4.02 Intr - 150245 150085  161  0  2   56   78    71 0.161   1.69
 4.01 Init - 154107 153888  220  0  1   71  103   126 0.243  11.24
 4.00 Prom - 168955 168916   40                              -5.45

 5.00 Prom + 180537 180576   40                              -5.75
 5.01 Sngl + 183029 183403  375  1  0   61   42   510 0.703  39.59
 5.02 PlyA + 183433 183438    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  74247  74448  202  2  1   43   70   117 0.849   4.60
S.002 Intr +  74517  74545   29  1  2  140  119    43 0.978   9.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:27398652_27601922|GENSCAN_predicted_peptide_1|241_aa
MTCDSASEDDRIRPGAQKRLPTPKLLCTGEKEQLYASRENSQVKEYREGPPKRKNSWHEE
LAAPISPGNLPEIQVTGPPPRSMESKILEVGLSNVFYTALLVIRIHIIVAQRGTTARLSQ
STFMLVKVFGLHSNFTRQVHLLLHTQVIPLHDGKFLPKLIPTTEHQRDKSSTSVCQNQST
CLKNNETRNSGSSNLRVGKDPDEMDVITSSANVINLLILGCHSGGFFLLLEFWNATSARM
V

>gi568815587r:27398652_27601922|GENSCAN_predicted_CDS_1|726_bp
atgacgtgtgactcagcaagtgaagatgatcgaatcagacctggagctcaaaaaaggctt
ccaacaccaaagctgttgtgcacaggggaaaaagagcagctgtatgcaagtagggaaaac
agccaagtaaaggagtacagggaagggcctccgaaacgaaagaacagctggcatgaagaa
ctagcagcaccaatatcacctggaaatttgccagaaattcaagtaactgggcccccaccc
aggtcgatggaatcaaaaatcctagaggtgggtctcagcaatgtgttttacacagccctc
ctggtgattcgaatacacattatagtggcacaacggggaaccactgcccggctctcacaa
agcacttttatgctcgtgaaagtatttggacttcacagcaactttacaaggcaggtacac
ctgttattacacactcaagtaataccactgcacgatgggaaattcctccccaagctcatt
cctaccactgaacaccagagagataaatcatcaacttctgtctgtcaaaaccagtctaca
tgtctgaaaaacaatgaaactagaaactcaggctcgagtaacttgagggttgggaaggac
cctgatgaaatggatgtcattacttcctctgccaacgtcataaatcttcttatccttgga
tgtcacagcggggggtttttcctccttctggaattctggaatgccacctcagccaggatg
gtgtga

>gi568815587r:27398652_27601922|GENSCAN_predicted_peptide_2|112_aa
MPGPLGLLCFLALGLLGSAGPSGAAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQ
ALEEKADMLTVDLQISVRGNCSCALQPSVLESGTGNEDIRVQEGIVELGQVT

>gi568815587r:27398652_27601922|GENSCAN_predicted_CDS_2|339_bp
atgccgggcccgctagggctgctctgcttcctcgccctggggctgctcggctcggccggg
cccagcggcgcggcgccgcctctctgcgcggcgccctgcagctgcgacggcgaccgtcgg
gtggactgctccgggaaggggctgacggccgtgcccgaggggctcagcgccttcacccaa
gcgctggaagagaaagcagatatgttaactgtggaccttcagatttcagttcgtggaaac
tgttcatgtgctcttcagccttctgttttagagtctggcacaggaaatgaagacatccga
gttcaggagggcattgtagagcttgggcaggtcacttaa

>gi568815587r:27398652_27601922|GENSCAN_predicted_peptide_3|308_aa
MDSSSEDRMDEGTQAKMQAGLEEVMGTTCGRLREKMAALGEPVRLERDTRRTRAPLVSTA
EAAFGDPYTRKANVTHPVRTDYTHCLYSTRTDTRYNSTEPPFPAVCTQTPSLLSPQPRLY
SGWDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAVREVYEHVYETVDISSSPEV
RANATAKATVAAFAASEGHSHPRVVELPKTEEGLGFNIMGGKEQNSPIYISRIIPGGIAD
RHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVRYTPKVLEEMESRFEKMR
SAKRRQQT

>gi568815587r:27398652_27601922|GENSCAN_predicted_CDS_3|927_bp
atggacagttcctcagaggacagaatggatgaggggacacaggcgaagatgcaagcaggt
ttggaagaagtgatgggaaccacatgtggaaggttaagggagaagatggcggcgctaggg
gaacccgtgcggctggagagagacacacgccgcacacgcgctcccttggtgagcacagca
gaagcagcattcggagacccgtacacccgaaaagcaaacgtcacacacccggttcgcaca
gactacactcattgcctgtacagcacgagaacggacacacggtacaattcaacagaacct
cctttccccgctgtttgcacacaaactccttcattactttctccacaacctcgcttgtat
tcgggttgggatatttgtagagcaattgaattattggaaaaactacaaaggagtggagaa
gtaccaccacagaaacttcaggctttgcaaagagtccttcaaagtgaattctgcaatgct
gtgagagaggtatatgaacatgtctatgagactgtggacatcagtagcagtcctgaagtg
agagcgaacgctactgcaaaggctactgttgctgcatttgctgccagtgaaggacattct
catcctcgagttgttgagctaccaaaaacagaagagggccttggattcaatattatggga
ggcaaagaacaaaactctccaatctatatatcccgaataattccaggtggaattgctgat
agacatgggggcctcaaacgtggagatcaactcctctctgttaatggagtgagtgttgaa
ggagaacatcatgaaaaagctgtagaactgctgaaagccgcacaaggaaaggttaaatta
gtggtacgatacacacccaaagtcttagaagaaatggagtcgcgctttgaaaaaatgaga
tcagcaaaacgcaggcaacagacctaa

>gi568815587r:27398652_27601922|GENSCAN_predicted_peptide_4|162_aa
MKRAKEKQFLELLPPQKIVNKKQYCIPGGTAEISATVKDLKDAGVAIPITFPFNTPIWSM
QKTDGAWRITVDYVCKETIMDLLGLQLVLVLWRILTNTITKAHLQPSIFPFPKFNQSPLL
EMTVMWEKPDQQFAHAALCFQVPFATATAISSPHTDTVSCVH

>gi568815587r:27398652_27601922|GENSCAN_predicted_CDS_4|489_bp
atgaagagggccaaggagaagcagttcctagaattgcttccacctcaaaaaatagtaaat
aaaaagcaatactgcattcctggagggactgcagagattagtgctaccgttaaggacttg
aaagatgcaggggtggcgattcccatcacattcccattcaacactcctatttggtctatg
cagaagacagatggagcttggagaataacagtggattatgtttgcaaagaaacaatcatg
gatcttctgggcctccaattagttctggttctctggagaatcctgactaatacaatcacc
aaggctcatcttcagccatcgatttttccctttccgaagttcaaccagtctccactatta
gagatgacagtgatgtgggagaaacctgatcagcagtttgctcatgctgctctctgtttc
caggtcccttttgcaacagcaactgccatctcctctcctcacacagacacagtcagctgt
gtacattga

>gi568815587r:27398652_27601922|GENSCAN_predicted_peptide_5|124_aa
MPPKDDKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKE
VPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAKVIYTRNTKGGDAAAA
GEDA

>gi568815587r:27398652_27601922|GENSCAN_predicted_CDS_5|375_bp
atgccacccaaggatgacaagaagaaggatgctggaaagtcggccaagaaagacaaagac
ccagttaacaaatccgggggcaaggccaaaaagaagaagtggtccaaaggcaaagttcgg
gacaagctcaataacttagtcttgtttgacaaagctacctatgacaaactctgtaaggaa
gttcccaattataaacttataaccccagctgtggtctctgagagactgaagattcgaggc
tccctggccagggcagcccttcaggagctccttagtaaaggacttatcaaactggtttca
aagcacagagctaaagtaatttacaccagaaataccaagggcggagatgctgcagctgct
ggtgaagatgcatga