Result of FASTA (ccds) for pF1KB9479
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9479, 731 aa
  1>>>pF1KB9479 731 - 731 aa - 731 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.4239+/-0.000824; mu= 7.5123+/- 0.049
 mean_var=205.4417+/-41.371, 0's: 0 Z-trim(114.8): 26  B-trim: 105 in 1/53
 Lambda= 0.089481
 statistics sampled from 15383 (15403) to 15383 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.473), width:  16
 Scan time:  4.970

The best scores are:                                      opt bits E(32554)
CCDS1074.1 PBXIP1 gene_id:57326|Hs108|chr1         ( 731) 5014 660.1 3.5e-189
CCDS81382.1 PBXIP1 gene_id:57326|Hs108|chr1        ( 702) 4816 634.5 1.7e-181


>>CCDS1074.1 PBXIP1 gene_id:57326|Hs108|chr1              (731 aa)
 initn: 5014 init1: 5014 opt: 5014  Z-score: 3510.0  bits: 660.1 E(32554): 3.5e-189
Smith-Waterman score: 5014; 100.0% identity (100.0% similar) in 731 aa overlap (1-731:1-731)

               10        20        30        40        50        60
pF1KB9 MASCPDSDNSWVLAGSESLPVETLGPASRMDPESERALQAPHSPSKTDGKELAGTMDGEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MASCPDSDNSWVLAGSESLPVETLGPASRMDPESERALQAPHSPSKTDGKELAGTMDGEG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 TLFQTESPQSGSILTEETEVKGTLEGDVCGVEPPGPGDTVVQGDLQETTVVTGLGPDTQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TLFQTESPQSGSILTEETEVKGTLEGDVCGVEPPGPGDTVVQGDLQETTVVTGLGPDTQD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 LEGQSPPQSLPSTPKAAWIREEGRCSSSDDDTDVDMEGLRRRRGREAGPPQPMVPLAVEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LEGQSPPQSLPSTPKAAWIREEGRCSSSDDDTDVDMEGLRRRRGREAGPPQPMVPLAVEN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QAGGEGAGGELGISLNMCLLGALVLLGLGVLLFSGGLSESETGPMEEVERQVLPDPEVLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QAGGEGAGGELGISLNMCLLGALVLLGLGVLLFSGGLSESETGPMEEVERQVLPDPEVLE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 AVGDRQDGLREQLQAPVPPDSVPSLQNMGLLLDKLAKENQDIRLLQAQLQAQKEELQSLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AVGDRQDGLREQLQAPVPPDSVPSLQNMGLLLDKLAKENQDIRLLQAQLQAQKEELQSLM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 HQPKGLEEENAQLRGALQQGEAFQRALESELQQLRARLQGLEADCVRGPDGVCLSGGRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HQPKGLEEENAQLRGALQQGEAFQRALESELQQLRARLQGLEADCVRGPDGVCLSGGRGP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 QGDKAIREQGPREQEPELSFLKQKEQLEAEAQALRQELERQRRLLGSVQQDLERSLQDAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QGDKAIREQGPREQEPELSFLKQKEQLEAEAQALRQELERQRRLLGSVQQDLERSLQDAS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 RGDPAHAGLAELGHRLAQKLQGLENWGQDPGVSANASKAWHQKSHFQNSREWSGKEKWWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RGDPAHAGLAELGHRLAQKLQGLENWGQDPGVSANASKAWHQKSHFQNSREWSGKEKWWD
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 GQRDRKAEHWKHKKEESGRERKKNWGGQEDREPAGRWKEGRPRVEESGSKKEGKRQGPKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GQRDRKAEHWKHKKEESGRERKKNWGGQEDREPAGRWKEGRPRVEESGSKKEGKRQGPKE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB9 PPRKSGSFHSSGEKQKQPRWREGTKDSHDPLPSWAELLRPKYRAPQGCSGVDECARQEGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PPRKSGSFHSSGEKQKQPRWREGTKDSHDPLPSWAELLRPKYRAPQGCSGVDECARQEGL
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB9 TFFGTELAPVRQQELASLLRTYLARLPWAGQLTKELPLSPAFFGEDGIFRHDRLRFRDFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TFFGTELAPVRQQELASLLRTYLARLPWAGQLTKELPLSPAFFGEDGIFRHDRLRFRDFV
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB9 DALEDSLEEVAVQQTGDDDEVDDFEDFIFSHFFGDKALKKRSGKKDKHSQSPRAAGPREG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DALEDSLEEVAVQQTGDDDEVDDFEDFIFSHFFGDKALKKRSGKKDKHSQSPRAAGPREG
              670       680       690       700       710       720

              730 
pF1KB9 HSHSHHHHHRG
       :::::::::::
CCDS10 HSHSHHHHHRG
              730 

>>CCDS81382.1 PBXIP1 gene_id:57326|Hs108|chr1             (702 aa)
 initn: 4816 init1: 4816 opt: 4816  Z-score: 3372.1  bits: 634.5 E(32554): 1.7e-181
Smith-Waterman score: 4816; 100.0% identity (100.0% similar) in 702 aa overlap (30-731:1-702)

               10        20        30        40        50        60
pF1KB9 MASCPDSDNSWVLAGSESLPVETLGPASRMDPESERALQAPHSPSKTDGKELAGTMDGEG
                                    :::::::::::::::::::::::::::::::
CCDS81                              MDPESERALQAPHSPSKTDGKELAGTMDGEG
                                            10        20        30 

               70        80        90       100       110       120
pF1KB9 TLFQTESPQSGSILTEETEVKGTLEGDVCGVEPPGPGDTVVQGDLQETTVVTGLGPDTQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TLFQTESPQSGSILTEETEVKGTLEGDVCGVEPPGPGDTVVQGDLQETTVVTGLGPDTQD
              40        50        60        70        80        90 

              130       140       150       160       170       180
pF1KB9 LEGQSPPQSLPSTPKAAWIREEGRCSSSDDDTDVDMEGLRRRRGREAGPPQPMVPLAVEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 LEGQSPPQSLPSTPKAAWIREEGRCSSSDDDTDVDMEGLRRRRGREAGPPQPMVPLAVEN
             100       110       120       130       140       150 

              190       200       210       220       230       240
pF1KB9 QAGGEGAGGELGISLNMCLLGALVLLGLGVLLFSGGLSESETGPMEEVERQVLPDPEVLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QAGGEGAGGELGISLNMCLLGALVLLGLGVLLFSGGLSESETGPMEEVERQVLPDPEVLE
             160       170       180       190       200       210 

              250       260       270       280       290       300
pF1KB9 AVGDRQDGLREQLQAPVPPDSVPSLQNMGLLLDKLAKENQDIRLLQAQLQAQKEELQSLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AVGDRQDGLREQLQAPVPPDSVPSLQNMGLLLDKLAKENQDIRLLQAQLQAQKEELQSLM
             220       230       240       250       260       270 

              310       320       330       340       350       360
pF1KB9 HQPKGLEEENAQLRGALQQGEAFQRALESELQQLRARLQGLEADCVRGPDGVCLSGGRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 HQPKGLEEENAQLRGALQQGEAFQRALESELQQLRARLQGLEADCVRGPDGVCLSGGRGP
             280       290       300       310       320       330 

              370       380       390       400       410       420
pF1KB9 QGDKAIREQGPREQEPELSFLKQKEQLEAEAQALRQELERQRRLLGSVQQDLERSLQDAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QGDKAIREQGPREQEPELSFLKQKEQLEAEAQALRQELERQRRLLGSVQQDLERSLQDAS
             340       350       360       370       380       390 

              430       440       450       460       470       480
pF1KB9 RGDPAHAGLAELGHRLAQKLQGLENWGQDPGVSANASKAWHQKSHFQNSREWSGKEKWWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RGDPAHAGLAELGHRLAQKLQGLENWGQDPGVSANASKAWHQKSHFQNSREWSGKEKWWD
             400       410       420       430       440       450 

              490       500       510       520       530       540
pF1KB9 GQRDRKAEHWKHKKEESGRERKKNWGGQEDREPAGRWKEGRPRVEESGSKKEGKRQGPKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 GQRDRKAEHWKHKKEESGRERKKNWGGQEDREPAGRWKEGRPRVEESGSKKEGKRQGPKE
             460       470       480       490       500       510 

              550       560       570       580       590       600
pF1KB9 PPRKSGSFHSSGEKQKQPRWREGTKDSHDPLPSWAELLRPKYRAPQGCSGVDECARQEGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PPRKSGSFHSSGEKQKQPRWREGTKDSHDPLPSWAELLRPKYRAPQGCSGVDECARQEGL
             520       530       540       550       560       570 

              610       620       630       640       650       660
pF1KB9 TFFGTELAPVRQQELASLLRTYLARLPWAGQLTKELPLSPAFFGEDGIFRHDRLRFRDFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TFFGTELAPVRQQELASLLRTYLARLPWAGQLTKELPLSPAFFGEDGIFRHDRLRFRDFV
             580       590       600       610       620       630 

              670       680       690       700       710       720
pF1KB9 DALEDSLEEVAVQQTGDDDEVDDFEDFIFSHFFGDKALKKRSGKKDKHSQSPRAAGPREG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 DALEDSLEEVAVQQTGDDDEVDDFEDFIFSHFFGDKALKKRSGKKDKHSQSPRAAGPREG
             640       650       660       670       680       690 

              730 
pF1KB9 HSHSHHHHHRG
       :::::::::::
CCDS81 HSHSHHHHHRG
             700  




731 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 23:47:40 2016 done: Thu Nov  3 23:47:41 2016
 Total Scan time:  4.970 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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