Result of FASTA (ccds) for pF1KB9423
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9423, 217 aa
  1>>>pF1KB9423 217 - 217 aa - 217 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2318+/-0.000743; mu= 13.6567+/- 0.044
 mean_var=57.6396+/-11.655, 0's: 0 Z-trim(107.5): 13  B-trim: 0 in 0/50
 Lambda= 0.168933
 statistics sampled from 9585 (9594) to 9585 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.295), width:  16
 Scan time:  1.780

The best scores are:                                      opt bits E(32554)
CCDS12081.1 MOB3A gene_id:126308|Hs108|chr19       ( 217) 1507 375.2 1.7e-104
CCDS6520.1 MOB3B gene_id:79817|Hs108|chr9          ( 216) 1249 312.3 1.5e-85
CCDS540.1 MOB3C gene_id:148932|Hs108|chr1          ( 216) 1181 295.8 1.4e-80
CCDS539.1 MOB3C gene_id:148932|Hs108|chr1          ( 268) 1181 295.8 1.7e-80
CCDS34002.1 MOB1B gene_id:92597|Hs108|chr4         ( 216)  857 216.8 8.3e-57
CCDS58903.1 MOB1B gene_id:92597|Hs108|chr4         ( 221)  857 216.8 8.5e-57
CCDS46340.1 MOB1A gene_id:55233|Hs108|chr2         ( 216)  841 212.9 1.2e-55
CCDS53591.1 MOB2 gene_id:81532|Hs108|chr11         ( 268)  440 115.2   4e-26


>>CCDS12081.1 MOB3A gene_id:126308|Hs108|chr19            (217 aa)
 initn: 1507 init1: 1507 opt: 1507  Z-score: 1989.4  bits: 375.2 E(32554): 1.7e-104
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 217 aa overlap (1-217:1-217)

               10        20        30        40        50        60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
              130       140       150       160       170       180

              190       200       210       
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
       :::::::::::::::::::::::::::::::::::::
CCDS12 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
              190       200       210       

>>CCDS6520.1 MOB3B gene_id:79817|Hs108|chr9               (216 aa)
 initn: 1249 init1: 1249 opt: 1249  Z-score: 1649.6  bits: 312.3 E(32554): 1.5e-85
Smith-Waterman score: 1249; 82.1% identity (92.9% similar) in 212 aa overlap (6-217:5-216)

               10        20        30        40        50        60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
            ::::::::::::::::::::::::::::.::::::.:.::. ::::: ::: :::
CCDS65  MSIALKQVFNKDKTFRPKRKFEPGTQRFELHKRAQASLNSGVDLKAAVQLPSGEDQNDW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
       :::::::::::.::::::: . :::..::::::::::::::::. :..::::: ::.::.
CCDS65 VAVHVVDFFNRINLIYGTICEFCTERTCPVMSGGPKYEYRWQDDLKYKKPTALPAPQYMN
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
       :::::::.:::::..::: ::.::::::::  .::: ::::::::::::::::.  ::.:
CCDS65 LLMDWIEVQINNEEIFPTCVGVPFPKNFLQICKKILCRLFRVFVHVYIHHFDRVIVMGAE
     120       130       140       150       160       170         

              190       200       210       
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
       :::::::::::::: :..::: ::::::::::.::::
CCDS65 AHVNTCYKHFYYFVTEMNLIDRKELEPLKEMTSRMCH
     180       190       200       210      

>>CCDS540.1 MOB3C gene_id:148932|Hs108|chr1               (216 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1560.1  bits: 295.8 E(32554): 1.4e-80
Smith-Waterman score: 1181; 74.1% identity (92.9% similar) in 212 aa overlap (6-217:5-216)

               10        20        30        40        50        60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
            ::::: :::::::...::::::::::.:::::::..::::: .:.:::::...::
CCDS54  MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
       .::::::::::.::::::... :.: :::::.:::.::::::::...:.:. ::::::: 
CCDS54 IAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMA
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
       :::::::. ::.:..::: ::.:::::: :.  :::.::::::::::::::: : .::.:
CCDS54 LLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAE
     120       130       140       150       160       170         

              190       200       210       
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
       :::::::::::::..::.:.: .:::::.::: :.::
CCDS54 AHVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH
     180       190       200       210      

>>CCDS539.1 MOB3C gene_id:148932|Hs108|chr1               (268 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1558.6  bits: 295.8 E(32554): 1.7e-80
Smith-Waterman score: 1181; 74.1% identity (92.9% similar) in 212 aa overlap (6-217:57-268)

                                        10        20        30     
pF1KB9                          MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKA
                                     ::::: :::::::...::::::::::.:::
CCDS53 GMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKA
         30        40        50        60        70        80      

          40        50        60        70        80        90     
pF1KB9 QASLNAGLDLRLAVQLPPGEDLNDWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGP
       ::::..::::: .:.:::::...::.::::::::::.::::::... :.: :::::.:::
CCDS53 QASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGP
         90       100       110       120       130       140      

         100       110       120       130       140       150     
pF1KB9 KYEYRWQDEHKFRKPTALSAPRYMDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKI
       .::::::::...:.:. ::::::: :::::::. ::.:..::: ::.:::::: :.  ::
CCDS53 RYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKI
        150       160       170       180       190       200      

         160       170       180       190       200       210     
pF1KB9 LSRLFRVFVHVYIHHFDRIAQMGSEAHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARM
       :.::::::::::::::: : .::.::::::::::::::..::.:.: .:::::.::: :.
CCDS53 LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREMTERI
        210       220       230       240       250       260      

         
pF1KB9 CH
       ::
CCDS53 CH
         

>>CCDS34002.1 MOB1B gene_id:92597|Hs108|chr4              (216 aa)
 initn: 874 init1: 770 opt: 857  Z-score: 1133.3  bits: 216.8 E(32554): 8.3e-57
Smith-Waterman score: 857; 55.0% identity (86.1% similar) in 202 aa overlap (14-215:11-211)

               10        20        30        40        50        60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
                    :::.::...  :....:: :.:.:.:..: .::.::.:: :::::.:
CCDS34    MSFLFGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRMAVMLPEGEDLNEW
                  10        20        30         40        50      

               70        80        90       100       110       120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
       :::..:::::..:..::::.: :::.::::::.::::::.: :  ...::   :::.:.:
CCDS34 VAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYID
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
        :: :.. :...: :::...:.::::::..... ::.:::::..:.: .::: . :.  :
CCDS34 YLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEE
        120       130       140       150       160       170      

              190       200       210          
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH   
       ::.:: .::: .::.::.::: .:: ::.:.  ..     
CCDS34 AHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR
        180       190       200       210      

>>CCDS58903.1 MOB1B gene_id:92597|Hs108|chr4              (221 aa)
 initn: 874 init1: 770 opt: 857  Z-score: 1133.1  bits: 216.8 E(32554): 8.5e-57
Smith-Waterman score: 857; 55.0% identity (86.1% similar) in 202 aa overlap (14-215:16-216)

                 10        20        30        40        50        
pF1KB9   MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLN
                      :::.::...  :....:: :.:.:.:..: .::.::.:: :::::
CCDS58 MEGATDVNESGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRMAVMLPEGEDLN
               10        20        30        40         50         

       60        70        80        90       100       110        
pF1KB9 DWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRY
       .::::..:::::..:..::::.: :::.::::::.::::::.: :  ...::   :::.:
CCDS58 EWVAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKY
      60        70        80        90       100       110         

      120       130       140       150       160       170        
pF1KB9 MDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMG
       .: :: :.. :...: :::...:.::::::..... ::.:::::..:.: .::: . :. 
CCDS58 IDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQ
     120       130       140       150       160       170         

      180       190       200       210          
pF1KB9 SEAHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH   
        :::.:: .::: .::.::.::: .:: ::.:.  ..     
CCDS58 EEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR
     180       190       200       210       220 

>>CCDS46340.1 MOB1A gene_id:55233|Hs108|chr2              (216 aa)
 initn: 858 init1: 754 opt: 841  Z-score: 1112.2  bits: 212.9 E(32554): 1.2e-55
Smith-Waterman score: 841; 53.5% identity (85.1% similar) in 202 aa overlap (14-215:11-211)

               10        20        30        40        50        60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
                    :::.::...  :....:: :.:.:.:..: .:: ::.:: :::::.:
CCDS46    MSFLFSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRQAVMLPEGEDLNEW
                  10        20        30         40        50      

               70        80        90       100       110       120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
       .::..:::::..:..::::.. ::: ::::::.::.:::.: :  ...::   :::.:.:
CCDS46 IAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYID
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
        :: :.. :...: :::...:.::::::..... ::.:::::..:.: .::: . :.  :
CCDS46 YLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEE
        120       130       140       150       160       170      

              190       200       210          
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH   
       ::.:: .::: .::.::.::: .:: ::.:.  ..     
CCDS46 AHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
        180       190       200       210      

>>CCDS53591.1 MOB2 gene_id:81532|Hs108|chr11              (268 aa)
 initn: 276 init1: 276 opt: 440  Z-score: 582.6  bits: 115.2 E(32554): 4e-26
Smith-Waterman score: 440; 33.8% identity (68.1% similar) in 213 aa overlap (6-216:32-239)

                                        10        20        30     
pF1KB9                          MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKA
                                     ...:. :.:. .:. : .:.... . . . 
CCDS53 LGDHCSLPEDQARPGQSLQSGLCCKMVLQAVSKVLRKSKA-KPNGK-KPAAEERKAYLEP
              10        20        30        40          50         

          40          50        60        70        80        90   
pF1KB9 QASLNAGLDLRLA--VQLPPGEDLNDWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSG
       . .     :...   : ::   :::.:.: ... ::...:: :.:::. :: ..: .:. 
CCDS53 EHTKARITDFQFKELVVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAV
      60        70        80        90       100       110         

           100       110       120       130       140       150   
pF1KB9 GPKYEYRWQDEHKFRKPTALSAPRYMDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVR
         . .: : ::.   : .  .::.:.:..:. ..  ...::.:::. :  ::..: . ::
CCDS53 C-NTQYYWYDERG--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVR
     120        130         140       150       160       170      

           160       170       180       190       200       210   
pF1KB9 KILSRLFRVFVHVYIHHFDRIAQMGSEAHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTA
       ::  .::.:..:.:  :: .   .  ..:.:: : ::  :..::.:.: ::   . ..: 
CCDS53 KICRHLFHVLAHIYWAHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTE
        180       190       200       210       220       230      

                                       
pF1KB9 RMCH                            
        .:                             
CCDS53 VLCSGAGGVHSGGSGDGAGSGGPGAQNHVKER
        240       250       260        




217 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 23:18:06 2016 done: Thu Nov  3 23:18:06 2016
 Total Scan time:  1.780 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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