GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:54:07

Sequence gi568815591r:80644897_81016781 : 371885 bp : 36.51% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1845   1964  120  2  0   73   82   218 0.987  19.99
 1.02 Intr +  11644  11804  161  0  2   82  109   121 0.905  11.46
 1.03 Intr +  16167  16314  148  0  1   75   73   156 0.838  12.12
 1.04 Intr +  19510  19601   92  0  2   26  115    64 0.106   0.77
 1.05 Intr +  26081  26268  188  2  2   92  113   124 0.998  13.71
 1.06 Intr +  27026  27144  119  0  2   74   58    94 0.987   4.26
 1.07 Intr +  27874  27947   74  0  2   88   70    62 0.334   1.69
 1.08 Intr +  30924  31051  128  0  2   25   70    97 0.300   1.00
 1.09 Intr +  32572  32731  160  2  1   32   55   108 0.069   0.02
 1.10 Intr +  41052  41170  119  0  2   93   49    71 0.001   2.89
 1.11 Intr +  43797  43913  117  1  0   14   98    73 0.009   0.42
 1.12 Intr +  47428  47659  232  2  1   37   72   178 0.055   7.01
 1.13 Term +  49930  50104  175  1  1   74   39   103 0.405   0.25
 1.14 PlyA +  50237  50242    6                               1.05

 2.00 Prom +  58356  58395   40                              -3.95
 2.01 Init +  63133  63210   78  0  0   73  116    67 0.936   9.11
 2.02 Term +  69285  70133  849  2  0  -17   43   577 0.627  34.56
 2.03 PlyA +  70361  70366    6                               1.05

 3.00 Prom +  70530  70569   40                              -6.15
 3.01 Sngl +  71481  72452  972  2  0   70   35   364 0.444  25.78
 3.02 PlyA +  72491  72496    6                               1.05

 4.16 PlyA -  73796  73791    6                               1.05
 4.15 Term - 100411  99998  414  1  0  113   34   361 0.986  27.48
 4.14 Intr - 104132 104002  131  0  2   76  105   127 0.996  12.69
 4.13 Intr - 106440 106364   77  2  2  111   61    42 0.418   2.04
 4.12 Intr - 113592 113435  158  0  2   55  101    39 0.008  -0.21
 4.11 Intr - 120347 120259   89  0  2   79   42    59 0.007  -0.83
 4.10 Intr - 144632 144410  223  2  1   61   99   276 0.973  22.78
 4.09 Intr - 150061 149958  104  2  2   92   94    30 0.447   2.97
 4.08 Intr - 157883 157769  115  2  1   17   56   122 0.749   1.00
 4.07 Intr - 159352 159210  143  2  2   83   95   118 0.940  11.15
 4.06 Intr - 160862 160743  120  0  0   89   83    74 0.942   6.55
 4.05 Intr - 165805 165715   91  1  1    5   89   102 0.022   0.65
 4.04 Intr - 173522 173403  120  2  0   64  107    57 0.037   4.97
 4.03 Intr - 182591 182529   63  2  0   63   98    69 0.904   3.40
 4.02 Intr - 183849 183689  161  1  2   80   84   121 0.940   9.69
 4.01 Init - 199216 199165   52  1  1   70   75    34 0.149   1.67
 4.00 Prom - 201893 201854   40                              -9.05

 5.00 Prom + 204295 204334   40                              -5.25
 5.01 Init + 213252 213296   45  2  0   91  109    14 0.787   4.53
 5.02 Intr + 214472 214574  103  1  1   62   58    50 0.421  -1.77
 5.03 Term + 216965 217446  482  0  2   48   37   234 0.976   8.27
 5.04 PlyA + 217459 217464    6                               1.05

 6.00 Prom + 219159 219198   40                              -6.05
 6.01 Init + 236755 236813   59  0  2   76   72    55 0.139   3.53
 6.02 Intr + 281744 281925  182  2  2   67   70   131 0.232   7.79
 6.03 Term + 305725 305885  161  2  2   37   44   130 0.048   0.62
 6.04 PlyA + 308159 308164    6                               1.05

 7.00 Prom + 309994 310033   40                              -5.45
 7.01 Init + 329511 329725  215  2  2   60   89    99 0.507   5.46
 7.02 Intr + 333532 333580   49  1  1   31  110    44 0.058  -1.34
 7.03 Intr + 351025 351214  190  0  1   64   75   133 0.145   7.84
 7.04 Intr + 354868 355002  135  2  0   65  111    17 0.589   1.32
 7.05 Intr + 360842 360929   88  0  1   87   89    37 0.972   1.81
 7.06 Term + 361786 361897  112  1  1   57   41   126 0.959   1.85
 7.07 PlyA + 362282 362287    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  17644  17432  213  1  0   87   38   302 0.857  20.03
S.002 Init - 165793 165715   79  1  1   22   89   103 0.922   5.07


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:80644897_81016781|GENSCAN_predicted_peptide_1|610_aa
MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
IFEPSLSVGTEADNFTVLNLAVAYNNTADGVYKVFNGKDNISKVAIIDTYKGKRSIYAVF
ESDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPV
YISLPHFLYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKI
QGSQENNPMVLLKVVHTPLNGTWSEGCGNAGPGQMHFSYRSLPAARVNVEHYYRKATNQE
STCLERSFASLKVLKAYLVPFLLTGKIKEVSVQDINMDMDETGNHYSEQTTARTENQTLH
VLTHRWELNNENTWTEVNYKENSKSSNRKVSNRALWQDGQVGTALSAALSKINTEEIQTT
IREYYKHLYANKLENLEEMDKFLNTYTLRSLNQEEIESLNRTITRSEIEAIINSLPTKKS
PEPDGFTAKFYQRDMDEAGNHHSRQTNTRTENQTPHVLTHKWELNNENNGLRVGNITHQD
LSGDGGVGDG

>gi568815591r:80644897_81016781|GENSCAN_predicted_CDS_1|1833_bp
atgggctgtgaccggaactgtgggctcatcgctggggctgtcattggtgctgtcctggct
gtgtttggaggtattctaatgccagttggagacctgcttatccagaagacaattaaaaag
caagttgtcctcgaagaaggtacaattgcttttaaaaattgggttaaaacaggcacagaa
gtttacagacagttttggatctttgatgtgcaaaatccacaggaagtgatgatgaacagc
agcaacattcaagttaagcaaagaggtccttatacgtacagagttcgttttctagccaag
gaaaatgtaacccaggacgctgaggacaacacagtctctttcctgcagcccaatggtgcc
atcttcgaaccttcactatcagttggaacagaggctgacaacttcacagttctcaatctg
gctgtggcatacaacaatactgcagatggagtttataaagttttcaatggaaaagataac
ataagtaaagttgccataatcgacacatataaaggtaaaaggtcaatctatgctgtattt
gaatccgacgttaatctgaaaggaatccctgtgtatagatttgttcttccatccaaggcc
tttgcctctccagttgaaaacccagacaactattgtttctgcacagaaaaaattatctca
aaaaattgtacatcatatggtgtgctagacatcagcaaatgcaaagaagggagacctgtg
tacatttcacttcctcattttctgtatgcaagtcctgatgtttcagaacctattgatgga
ttaaacccaaatgaagaagaacataggacatacttggatattgaacctataactggattc
actttacaatttgcaaaacggctgcaggtcaacctattggtcaagccatcagaaaaaatt
caggggtcacaagaaaataacccaatggtccttttgaaagtagtacatacacctttaaat
ggaacttggtctgaagggtgtggaaatgctggtccagggcagatgcacttcagctaccgt
tccttgcctgccgccagagtaaatgttgagcattactacagaaaagccacaaaccaagaa
tctacctgtttggaaagatcttttgcatctctgaaggtgcttaaagcatacttagtgcct
ttccttttaactgggaagataaaagaagtatctgtccaagatattaatatggacatggat
gaaactggaaaccattattctgagcaaactaccgcaaggacagaaaaccagacactgcat
gttctcactcataggtgggaactgaataatgagaacacttggacagaggtgaattacaaa
gagaattctaaaagcagcaatagaaaagtatcaaatcgggcactttggcaagatggccaa
gtaggaacagctctgtctgcggctctcagcaagatcaacacagaagaaatacaaactacc
atcagagaatactataaacacctctatgcaaataaactagaaaatctagaagaaatggat
aaattcctgaacacatacaccctccgaagtctaaaccaggaagaaattgaatctctaaat
agaacaataacacgttcggaaatcgaggcaataattaatagcctaccaaccaaaaaaagt
ccagaaccagatggattcacagccaaattctaccagagggacatggatgaagctggaaac
catcattctcggcaaactaacacaagaacagaaaaccaaacaccacatgttctcactcac
aagtgggagttgaacaatgagaacaatggactcagggtgggaaacatcacacaccaggac
ctgtcaggggatggtggggtaggggatggatag

>gi568815591r:80644897_81016781|GENSCAN_predicted_peptide_2|308_aa
MGLEEAAFPKDLERMPGRGRGEQSQKEDIQTKGKEVENFEKNLEECITRITNTEKCLKEL
MELKTKARELCEECRSLRSRCDQLEERVSAMEDEMNERKREGKFREKRIKRNEQSLQEIW
DYVKRPNLCLIGVPESDGENGTKLENTLQDIIQENFPNLARQANVQIQEIQRTPQRYSSR
SATPRHIIVRFTEVEMKEKMLRAAREKGRVTLKGKPIRLTADLSAETLQARRPWGPIFNI
LKEKNFQPRISYPAKLSFISEGEIKYFTDKQMLRDFVTTRPALKELLKEALNMERNNRYQ
LLQNHAKM

>gi568815591r:80644897_81016781|GENSCAN_predicted_CDS_2|927_bp
atggggctggaagaagcagcatttccaaaggacttagaaagaatgccaggaagaggaaga
ggagaacagtcacaaaaggaggacattcaaaccaaaggcaaagaagttgaaaacttcgaa
aaaaacttagaagaatgtataactagaataaccaatacagagaagtgcttaaaggagctg
atggagctgaaaaccaaggctcgagaactatgtgaagaatgcagaagcctcaggagccga
tgcgatcaactggaagaaagggtatcagcaatggaagatgaaatgaatgaaaggaagcga
gaagggaagtttagagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgg
gactatgtgaaaagaccaaatctatgtctgatcggtgtacctgaaagtgacggggagaat
ggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagca
aggcaggccaacgttcagattcaggaaatacagagaacgccacaaagatactcctcgaga
agtgcaactccaagacacataattgtcagattcaccgaagttgaaatgaaggaaaaaatg
ttaagggcagccagagagaaaggtcgggttaccctcaaagggaagcccatcagactaaca
gcagatctctcagcagaaaccctacaagccagaagaccgtgggggccaatattcaacatt
cttaaagaaaagaattttcaacccagaatttcatatccggccaaactaagcttcataagt
gaaggagaaataaaatactttacagacaagcaaatgctaagagattttgtcaccaccagg
cctgccctaaaagagctcctgaaggaagcgctaaacatggaaaggaacaaccggtaccag
ctgctgcaaaatcatgccaaaatgtaa

>gi568815591r:80644897_81016781|GENSCAN_predicted_peptide_3|323_aa
MDKFLGTYTLPRLNQEEVESLNRPITGSEIVAIIKSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLIHHDQVGFIPGMQGLFNIHKSINVIQCINRAKDKNHMIISIDAEKAFDKI
QQRFMLKTLNKLGIDGTYFKIIRVIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLIF
NIVLEVLSRAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPTVSAQNLLKLISNFSKV
SGYKINVHKSQAFLYTNNRQTES

>gi568815591r:80644897_81016781|GENSCAN_predicted_CDS_3|972_bp
atggataaattcctcggcacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggatctgaaattgtggcaataatcaaaagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactct
ttttatgaggccagcatcattctgataccaaagcctggcagagacacaaccaaaaaagag
aattttagaccaatatctttgatgaacattgatgcaaaaatcctcaataaaatactggca
aacagaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggcttgttcaatatacacaaatcaataaatgtaatccagtgtataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacgcttcatgctaaagactctcaataaattaggtattgatgggacatatttcaaa
ataataagagttatttatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcatattc
aacatagttttggaagttctgtccagggcaatcaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctctttgcagacgacatgattgtatatcta
gaaaaccccactgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacacaaatcacaagcattcttatacaccaataacagacaa
acagagagctaa

>gi568815591r:80644897_81016781|GENSCAN_predicted_peptide_4|686_aa
MGTGECGHWHLNSKCGKELRETKTSEYFSLSHHPLDYRILLMDEDQDRIYVGSKDHILSL
NINNISQEALSVFWPASTIKVEECKMAGKDPTHGCGNFVRVIQTFNRTHLYVCGSGAFSP
VCTYLNRGRRSEDQVFMIDSKCESGKGRCSFNPNVNTVSVMINEELFSGMYIDFMGTDAA
IFRSLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKVYFFFKEKLTDNNRSTKQ
IHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPETHFDELGASFKTRLVALL
ANDPTSKPKSVGRSLPIVSLYFSCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPI
HKRPLIVRIGTDYKYTKIAVDRVNAADGRYHVLFLGTDRGTVQKVVVLPTNNSVSGELIL
EELEVFKQQLYVSSNEGVSQVSLHRCHIYGTACADCCLARDPYCAWDGHSCSRFYPTGKR
RSRRQDVRHGNPLTQCRGFNLKGIKTYRNAAEIVQYGVKNNTTFLECAPKSPQASIKWLL
QKDKDRRKEVKLNERIIATSQGLLIRSVQGSDQGLYHCIATENSFKQTIAKINFKVLDSE
MVAVVTDKWSPWTWASSVRALPFHPKDIMGAFSHSEMQMINQYCKDTRQQHQQGDESQKM
RGDYGKLKALINSRKSRNRRNQLPES

>gi568815591r:80644897_81016781|GENSCAN_predicted_CDS_4|2061_bp
atggggacaggagagtgtggacactggcacttaaattcaaaatgtgggaaagaacttcga
gaaaccaagacctctgaatacttcagcctttcccaccatcctttagactacaggatttta
ttaatggatgaagatcaggaccggatatatgtgggaagcaaagatcacattctttccctg
aatattaacaatataagtcaagaagctttgagtgttttctggccagcatctacaatcaaa
gttgaagaatgcaaaatggctggcaaagatcccacacacggctgtgggaactttgtccgt
gtaattcagactttcaatcgcacacatttgtatgtctgtgggagtggcgctttcagtcct
gtctgtacttacttgaacagagggaggagatcagaggaccaagttttcatgattgactcc
aagtgtgaatctggaaaaggacgctgctctttcaaccccaacgtgaacacggtgtctgtt
atgatcaatgaggagcttttctctggaatgtatatagatttcatggggacagatgctgct
atttttcgaagtttaaccaagaggaatgcggtcagaactgatcaacataattccaaatgg
ctaagtgaacctatgtttgtagatgcacatgtcatcccagatggtactgatccaaatgat
gctaaggtgtacttcttcttcaaagaaaaactgactgacaataacaggagcacgaaacag
attcattccatgattgctcgaatatgtcctaatgacactggtggactgcgtagccttgtc
aacaagtggaccactttcttaaaggcgaggctggtgtgctcggtaacagatgaagacggc
ccagaaacacactttgatgaattaggtgcttcttttaaaacacggttggtagctctgtta
gcaaacgaccccaccagcaagcccaagtcagtaggaagaagcctgccaattgtgtcatta
tatttttcctgtccaggaggagcatttacacccaatatgcgaaccaccaaggagttccca
gatgatgttgtcacttttattcggaaccatcctctcatgtacaattccatctacccaatc
cacaaaaggcctttgattgttcgtattggcactgactacaagtatacaaagatagctgtg
gatcgagtgaacgctgctgatgggagataccatgtcctgtttctcggaacagatcggggt
actgtgcaaaaagtggttgttcttcctactaacaactctgtcagtggcgagctcattctg
gaggagctggaagtctttaagcaacagttgtatgtgagttccaatgaaggggtttcccag
gtatctctgcaccgctgccacatctatggtacagcctgtgctgactgctgcctggcgcgg
gacccttattgcgcctgggatggccattcctgttccagattctacccaactgggaaacgg
aggagccgaagacaagatgtgagacatggaaacccactgactcaatgcagaggatttaat
ctaaaaggtattaaaacatacagaaatgcagctgaaattgtccagtatggagtaaaaaat
aacaccacttttctggagtgtgcccccaagtctccgcaggcatctatcaagtggctgtta
cagaaagacaaagacaggaggaaagaggttaagctgaatgaacgaataatagccacttca
cagggactcctgatccgctctgttcagggttctgaccaaggactttatcactgcattgct
acagaaaatagtttcaagcagaccatagccaagatcaacttcaaagttttagattcagaa
atggtggctgttgtgacggacaaatggtccccatggacctgggccagctctgtgagggct
ttacccttccacccgaaggacatcatgggggcattcagccactcagaaatgcagatgatt
aaccaatattgcaaagacactcggcagcaacatcagcagggagatgaatcacagaaaatg
agaggggactatggcaagttaaaggccctcatcaatagtcggaaaagtagaaacaggagg
aatcagttgccagagtcataa

>gi568815591r:80644897_81016781|GENSCAN_predicted_peptide_5|209_aa
MAYTPSYLYKEEGFQLVVVLKKYPMSSLERIPVLLYHFQVHPKDFYQVSDAEKAFDKIQH
PFMIKTLSKIDIQGTYLNIIKVIYDKPTANITLNGEKLKPCHLRNGKRQECTLLPLLFNI
VLEVLARAIRQEKEIKGIQIGKEEVILSLFADDRTIYLENPKDSRKLLELIKEFSKVSRY
KTKIHKSVVACVPTATMQRIKPRTQPLFQ

>gi568815591r:80644897_81016781|GENSCAN_predicted_CDS_5|630_bp
atggcttatactcctagttatttgtataaggaggaaggctttcagcttgtggttgtattg
aaaaagtacccgatgagctccctagagaggatacctgttctgctctatcattttcaagtt
catcctaaagatttctaccaagtgtcagatgcagaaaaagcatttgacaaaatccagcat
ccctttatgattaaaactctcagcaaaatcgacatacaaggtacctacctcaatataata
aaagtcatttatgacaaacccacagccaacataacactgaatggggaaaagctgaaacca
tgccatctaagaaatggaaagagacaagaatgcacactcttaccactcctcttcaacata
gtactggaagtcctagccagagcaatcagacaagagaaagaaataaagggcatccaaata
ggtaaagaggaagtcatactgtcactgtttgctgatgataggaccatttaccttgaaaac
cctaaagactccagaaagctcctagaactgataaaagaattcagcaaagtttccagatac
aagactaagatacacaagtcagtagtagcttgtgtaccaacagcgaccatgcagagaatc
aaaccaagaactcaaccactttttcaatag

>gi568815591r:80644897_81016781|GENSCAN_predicted_peptide_6|133_aa
MGTINCAYNWLHSSSSNELNGFSVSLTSRMKLRTLTMSVTVLKDGVPGVCSFRCSDVSRV
SSFWWVCGLADFRSEAADLLRMKKQERAECIWMCLVLACSPFLKSSITTCGFKLDDISGP
KMIDDHNFVAAVV

>gi568815591r:80644897_81016781|GENSCAN_predicted_CDS_6|402_bp
atgggaacaattaactgtgcttacaattggcttcatagcagcagcagcaatgagttgaat
gggttctcggtctcactgacttcaagaatgaagctgcggaccctcacaatgagtgttaca
gttcttaaagatggtgtgcccggagtttgttccttcagatgttcagatgtgtccagagtt
tcttccttctggtgggtttgtggtcttgctgactttaggagtgaagctgcagaccttctc
agaatgaagaaacaagaacgagctgaatgtatctggatgtgtctggtcctggcttgcagc
ccttttcttaaatccagtatcactacttgtggttttaaacttgatgacatctctgggcct
aaaatgatagatgatcacaactttgttgctgctgtggtttag

>gi568815591r:80644897_81016781|GENSCAN_predicted_peptide_7|262_aa
MMCPEFVPSDVQMCPEFLASGGFVVSLTSGMKLQTLTVGVTALIRSASGVVRSFQWVCGL
NWPQEQSCRPSCNLRKECERWRLGDGNRQRKSDIPSGMALMSIQFIWILFCEKNGKETIN
PISRFPIKHDSSEKQEEQTFEGNGNKEEDGPEHCMSCISQYSLEGLPYCTHPVGTIGMQF
SDTEQQNPHSATSLKLDRFYFCGVQIAWRKKGSSKRKLNQRGGSEWRKKVEVDIRDLPIT
NALLVMTSEKHSICGSAGGLGQ

>gi568815591r:80644897_81016781|GENSCAN_predicted_CDS_7|789_bp
atgatgtgtccagagtttgttccttcagatgttcagatgtgtccagagtttcttgcttct
ggtgggtttgtggtctcgctgacttcaggaatgaagctgcagaccctcactgtgggtgtt
acagctcttatacgcagtgcttctggagttgttcgctccttccagtgggtttgtggtctt
aactggcctcaagagcaaagctgcagaccttcgtgtaacctgcgcaaggaatgcgagcgc
tggagacttggggatggcaataggcaaagaaagtcagacatacccagtgggatggcttta
atgagtatccaattcatttggatcctcttctgtgagaaaaatgggaaagaaacaataaac
cctataagcagatttcccatcaagcatgattcatcagaaaaacaagaggaacaaaccttt
gaaggtaatggcaacaaggaggaggatggcccagagcattgtatgtcttgtatatcacag
tattccctagaagggctaccatattgcacacatccagtgggcactattggcatgcaattc
tctgacactgagcagcaaaatccccattccgcaacatcattaaaacttgaccggttttat
ttctgtggagtccagattgcctggagaaagaaaggttcttccaagagaaaacttaaccaa
agaggaggatcagaatggagaaagaaggtagaagttgatatccgagatttaccaataacc
aatgctctcctggtaatgacctcagagaaacacagtatctgtggatctgcaggaggcctg
ggccaatga