GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:22:13

Sequence gi568815586r:84761635_84992120 : 230486 bp : 35.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    918    913    6                               1.05
 1.02 Term -  32598  32383  216  0  0  -22   48   275 0.280   8.66
 1.01 Init -  73414  73271  144  1  0   73   63   131 0.895   9.27
 1.00 Prom -  78655  78616   40                              -7.35

 2.00 Prom +  79449  79488   40                              -4.65
 2.01 Init +  83573  83736  164  1  2   45  116    90 0.531   6.75
 2.02 Intr +  83962  84040   79  1  1   69   49    47 0.472  -2.47
 2.03 Intr +  86567  86711  145  1  1    1   81   129 0.445   2.43
 2.04 Intr +  91244  91397  154  0  1   60   87    91 0.902   4.41
 2.05 Term +  95382  95610  229  0  1  100   45   106 0.812   2.62
 2.06 PlyA +  97042  97047    6                               1.05

 3.10 PlyA -  97880  97875    6                               1.05
 3.09 Term - 100372  99998  375  1  0  107   37   327 0.996  23.25
 3.08 Intr - 101967 101805  163  2  1   91   94    33 0.952   3.26
 3.07 Intr - 105559 105400  160  2  1   73   97    88 0.994   6.32
 3.06 Intr - 109036 108844  193  1  1  112  105   123 0.874  14.54
 3.05 Intr - 111160 110968  193  0  1   94   30   143 0.862   7.67
 3.04 Intr - 111723 111453  271  1  1   56    8   158 0.065   0.28
 3.03 Intr - 116321 116283   39  0  0  122   75    19 0.304   1.28
 3.02 Intr - 122406 122221  186  1  0   93   30   104 0.446   3.84
 3.01 Init - 130486 130198  289  1  1   32  115   293 0.976  23.72
 3.00 Prom - 141398 141359   40                              -4.95

 4.06 PlyA - 141632 141627    6                               1.05
 4.05 Term - 149193 149008  186  0  0   65   33   124 0.539   1.11
 4.04 Intr - 150572 150189  384  2  0   39   77   274 0.602  15.52
 4.03 Intr - 150975 150847  129  0  0   82   59   208 0.493  17.27
 4.02 Intr - 176907 176708  200  1  2   62   42   113 0.031   2.25
 4.01 Init - 178028 177830  199  2  1   47  -31   238 0.033   6.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  13594  13298  297  1  0   67   38   165 0.937   4.89
S.002 Sngl - 178028 177801  228  2  0   47   42   252 0.823  11.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:84761635_84992120|GENSCAN_predicted_peptide_1|119_aa
MEEEYTVRIEANPFKEEAVGNVLADTDTCRNTQIFLEDHSLLLYLGEKEQWQTFSPIRSG
NGHLTGSGAQRTPCRIRRGGSQLRVCDGGKQQWWTVSQSSARAITNTDQKSVQLQDLIE

>gi568815586r:84761635_84992120|GENSCAN_predicted_CDS_1|360_bp
atggaggaagaatatactgtcagaattgaagccaaccctttcaaagaagaggcagttggc
aacgtattagcggacacagacacatgtagaaatacacagatattcctcgaggatcattct
ctgctactatatttgggagagaaggaacaatggcaaacctttagcccgatcaggagtggc
aatgggcaccttactggatcaggagcacagcggacaccctgccggatccggaggggtgga
agtcagttacgggtctgcgatggcggcaaacagcagtggtggactgtcagccaaagctca
gctcgagccataacaaacacggaccagaagagtgtgcagttgcaagatttaatagagtga

>gi568815586r:84761635_84992120|GENSCAN_predicted_peptide_2|256_aa
MLSNNITSYTEIFHERKSTYGTSFIVFLLLEIATATLTFSNHHPAQSTAQPSTLRLSGTE
LAKSLRYAVYLSMIPEENLAMKKKKEEKKGKEEEEKKRERMEEEGRERRKEGEMKKGRKK
GRRERGRKEARTSSTIEMLNNSGDSGHLCRVPDLRGNAFRFSPRSMILAMELSYMAFIML
SQRSLSLWPLPPAHKVLCQTTTDVHLKTKDSYSPFRKVGSRLAKSWSRNAVQEPSPWLRD
PKTLLVALAHCGGAGT

>gi568815586r:84761635_84992120|GENSCAN_predicted_CDS_2|771_bp
atgctatcaaacaacatcacatcctacacagaaatctttcatgaaaggaagtcaacctat
gggacaagctttattgtcttcttacttttagaaattgccacagccaccctaaccttcagc
aaccaccaccctgctcagtcaacagcccaaccatcaacattaaggttgtctggaactgaa
cttgcaaaatctctaaggtatgctgtgtatttatccatgatccctgaagagaacttagca
atgaaaaaaaagaaagaagaaaagaaaggaaaggaagaggaggagaagaagagggaaaga
atggaggaagaagggagggagagaaggaaggaaggagagatgaagaaaggaagaaagaaa
ggaaggagggaaagaggaaggaaggaagctaggacttccagtacgattgagatgttgaat
aatagtggtgacagtgggcatctttgtcgtgttccagatcttagaggaaatgcttttaga
ttttccccacgcagtatgatactagctatggagctgtcttatatggcttttatcatgttg
agtcagaggagcctctctctgtggccactaccaccagcccataaggtgctctgccagacc
accactgatgttcacttaaagaccaaggactcttactcacccttcagaaaagtgggctcc
cgtctggccaaaagctggtccagaaatgctgtccaagagcctagtccttggctcagagac
cccaagaccctgcttgttgccctagcccattgtggcggagctggtacctaa

>gi568815586r:84761635_84992120|GENSCAN_predicted_peptide_3|622_aa
MPKNSKVVKRELDDDVTESVKDLLSNEDAADDAFKTSELIVDGQEEKDTDVEEGSEVEDE
RPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGVVEPECEQSSATTYYWYREALNIS
SSISESGGLNWKMTICLLAAWVMVCLAMIKGIQSSGKVNTYDRVTMSATVLADSIMFIFK
QLEIMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLA
TLVVFAVLGFKANVINEKCITQNSETIMKFLKMGNISQDIIPHHINLSTVTAEDYHLVYD
IIQKVKEEEFPALHLNSCKIEEELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLV
NLGLGSMFGTIEGIVTPIVDTFKVRKEILTVICCLLAFCIGLIFVQRSGNYFVTMFDDYS
ATLPLLIVVILENIAVCFVYGIDKFMEDLKDMLGFAPSRYYYYMWKYISPLMLLSLLIAS
VVNMGLSPPGYNAWIEDKASEEFLSYPTWGLVVCVSLVVFAILPVPVVFIVRRFNLIDDS
SGNLASVTYKRGRVLKEPVNLEGDDTSLIHGKIPSEMPSPNFGKNIYRKQSGSPTLDTAP
NGRYGIGYLMADIMPDMPESDL

>gi568815586r:84761635_84992120|GENSCAN_predicted_CDS_3|1869_bp
atgcccaaaaatagcaaggtggtaaaaagagaattagatgatgatgttactgagtctgtc
aaagaccttctttccaatgaagacgcagctgatgatgcttttaagacaagtgaactaatt
gttgatggccaggaagagaaagatacagatgttgaagaaggatctgaagtcgaagatgaa
agaccagcttggaacagtaaactacaatacatcctggcccaagttggattttctgtaggt
ttaggaaatgtgtggcgatttccatacctatgtcagaagaatgggggcgttgtagaacca
gaatgtgaacaaagttctgccaccacctattactggtacagggaagcactgaatatttca
agttccatttctgaaagtgggggcttaaactggaagatgaccatctgcttgttggctgcc
tgggtcatggtttgcttggctatgatcaaaggcattcagtcttctggaaaagttaataca
tatgatagagttactatgtcagcaactgtgttagctgattctattatgtttatttttaaa
cagcttgaaataatgctggagcccaaggtctggagagaagctgctactcaagtgttcttt
gccttaggtctgggatttggtggtgtcattgccttttcaagctacaacaagagagacaac
aactgccactttgatgctgtcctggtgtccttcatcaattttttcacttctgtcctggca
acattggtggtgtttgcagttctgggcttcaaagcaaatgtcataaatgagaaatgcatt
acacaaaattcagagacgatcatgaaatttttgaaaatggggaacattagtcaggatatt
attccccatcatatcaacctttcaactgttactgcagaagattatcatttagtttatgac
atcattcaaaaagtgaaagaagaagagtttcctgctcttcatctcaattcctgtaaaatt
gaagaagagctaaataaagctgttcaggggaccggcttagcttttattgcctttacagaa
gcgatgacacattttcctgcatctcccttctggtcagtgatgtttttcctcatgctggtc
aatctaggccttggcagtatgtttggaaccattgaagggattgtcacgcctattgtggac
actttcaaagtgaggaaagaaattcttactgttatctgttgtcttctggcattttgtatt
ggcctgatatttgtgcaacgctctggaaattactttgttacaatgtttgatgattattct
gctacactgcctctgctaattgtagtcattttggagaatattgctgtatgctttgtttat
ggcatagataagtttatggaagacctaaaagatatgctgggctttgctcccagcagatat
tactactatatgtggaaatatatttctcctctaatgctattatcattgctaatagctagt
gttgtgaatatgggattaagtcctcctggctataacgcatggattgaagataaggcatct
gaagaatttctgagctatccaacatggggactggttgtttgtgtctctctggttgtcttt
gcaatactcccagtccctgtagttttcattgttcgtcgcttcaaccttatagatgatagt
tctggtaatttagcatctgtgacctataagagaggaagggtcctgaaagagcctgtgaac
ttagagggcgatgatacaagcctcattcacggaaaaataccgagcgagatgccatctcca
aattttggtaaaaatatttatcgaaaacagagtggatccccaactctggatactgctccc
aatggacggtatggaatagggtacttgatggcagatattatgccagatatgccagaatct
gatttgtag

>gi568815586r:84761635_84992120|GENSCAN_predicted_peptide_4|365_aa
MWTEVPKSGNGKKKSTPIKKDHYISKTFLREDRDIVVLRNSLIASKKGPPLRRRNSFPCP
MEATAIGNHWYSLKGQELFSQLVLCTDRTGTHPSGQWAPFWPRAGPEMMSKSLGLGSGTP
TPCLLLWPIVAELPPGPYPFATAAAAARTWKQQEALGQDTLTVMASAYAKGTTGGEHPQR
PTRFQAKSGLVEGWGPTRESPRGKLGGLGQRETRGELEAKPRAGGRWGGESRELYSSFAS
VRFSKGRRRLPRTECFHVTTVPLCLRYPVINGPKGGLSPYERHVAAGEITAPVFLRILEF
ESVAAGAIYRYGQKGSEQYGLLLRGILIRCFHEEAVLALVPARCRSVVQGVPWTFVQQDM
IGMSL

>gi568815586r:84761635_84992120|GENSCAN_predicted_CDS_4|1098_bp
atgtggactgaggtacccaagagtggcaatggcaagaagaagtccacgccaatcaagaaa
gaccactacatctccaagacgttcctgcgtgaggacagagacatcgtggttctgaggaac
tcgctcatcgccagcaagaaggggccacccctccgtcgacggaactcattcccctgtcct
atggaggccactgccattggcaaccactggtattcacttaaaggccaagagctcttcagt
cagcttgtgttgtgtaccgacaggactgggactcacccttcaggtcagtgggctcccttt
tggcccagagctggtccagaaatgatgtccaagagcctaggcctgggctcaggaactcca
acaccctgcttgttgctctggcccattgtggctgagctgccacctggaccctaccctttc
gcgactgctgctgctgctgcccggacgtggaagcagcaagaggcgcttggtcaagacaca
ctgacggtaatggcaagcgcctacgctaagggcacaactgggggtgagcatccccagaga
cctactcgtttccaagccaagtcggggttggttgaagggtggggtccaacacgggaaagt
ccaagaggaaagttgggagggttggggcagagagagacgcgaggtgaattggaagctaaa
cctcgtgcaggtgggcgatggggcggggagagcagagagctttattcctcattcgcttcc
gttcgctttagcaaaggcagaaggcgactaccgaggacagagtgttttcacgtgaccaca
gttcccctttgcttgaggtatcctgtgataaatggcccgaaagggggcctttcgccgtac
gaaaggcacgtggctgctggagaaatcacggctcctgtgtttctgcgcatcctggaattt
gagagtgtggcggctggggccatttataggtacgggcagaaggggtctgagcagtatggc
ttgctgctccgcgggatattaataagatgcttccatgaagaggcggttctggctcttgtt
ccggcgcgatgtcgttctgttgttcagggtgttccttggacctttgtccagcaagatatg
atagggatgtctctttag