GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:18:04

Sequence gi568815597f:26429921_26674198 : 244278 bp : 47.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2642   2803  162  1  0   95   27   118 0.689   6.13
 1.02 Intr +   8248   8364  117  0  0  117   90   184 0.995  22.16
 1.03 Intr +  12811  12953  143  0  2  112   69   175 0.997  17.15
 1.04 Intr +  16396  16512  117  1  0   84  108   103 0.925  11.48
 1.05 Intr +  17639  17740  102  2  0  148   68    53 0.742   8.59
 1.06 Intr +  27871  27985  115  1  1   78   96    84 0.210   8.65
 1.07 Intr +  30117  30224  108  2  0   95  110    63 0.927   9.68
 1.08 Term +  38972  39211  240  1  0   69   42   261 0.640  15.63
 1.09 PlyA +  39686  39691    6                              -0.45

 2.00 Prom +  40715  40754   40                              -4.66
 2.01 Init +  42693  42707   15  2  0  114  102    14 0.770   5.45
 2.02 Intr +  43563  43607   45  2  0   92  100    51 0.960   5.31
 2.03 Intr +  44165  44215   51  1  0   40  115    55 0.778   2.50
 2.04 Intr +  44652  44747   96  2  0   77   75   124 0.955  10.21
 2.05 Term +  45193  45228   36  0  0   73   45    58 0.723  -2.66
 2.06 PlyA +  46024  46029    6                               1.05

 3.00 Prom +  67247  67286   40                              -2.16
 3.01 Sngl +  70281  71015  735  2  0  101   50   141 0.701   7.88
 3.02 PlyA +  73852  73857    6                               1.05

 4.03 PlyA -  73989  73984    6                               1.05
 4.02 Term -  89516  89434   83  0  2   97   43    68 0.889   1.06
 4.01 Init -  90369  90150  220  0  1   39   34   186 0.668   7.09
 4.00 Prom -  96775  96736   40                              -7.46

 5.00 Prom +  97343  97382   40                              -4.36
 5.01 Init + 100001 100063   63  1  0   96  105    76 0.609  11.30
 5.02 Intr + 107005 107049   45  0  0  125  100    24 0.215   5.91
 5.03 Intr + 109274 109487  214  1  1   51   38   122 0.165   1.79
 5.04 Intr + 109743 109808   66  1  0  100   76    19 0.116   0.78
 5.05 Intr + 112653 112793  141  1  0   97   43    36 0.093   0.32
 5.06 Intr + 114155 114236   82  0  1  118   38    40 0.098   0.70
 5.07 Intr + 116043 116115   73  0  1   83  109    40 0.124   5.01
 5.08 Intr + 116947 117063  117  0  0   75   87   160 0.711  15.26
 5.09 Intr + 117269 117350   82  1  1  117  113   120 0.999  16.61
 5.10 Intr + 121477 121557   81  2  0   74   58   107 0.980   5.91
 5.11 Intr + 121724 121803   80  0  2  108   83    67 0.999   7.47
 5.12 Intr + 123471 123577  107  2  2  118   81    99 0.999  11.21
 5.13 Intr + 124294 124331   38  1  2   92  105    62 0.999   6.21
 5.14 Intr + 124676 124818  143  0  2   80  101   245 0.954  25.07
 5.15 Intr + 125231 125301   71  1  2   69   74    85 0.882   3.18
 5.16 Intr + 125617 125705   89  1  2   75  111    91 0.998   9.71
 5.17 Intr + 126734 126798   65  0  2   78   82    69 0.980   3.74
 5.18 Intr + 127078 127180  103  0  1   14   69   158 0.713   6.25
 5.19 Intr + 128887 129017  131  2  2  107   94   204 0.981  23.31
 5.20 Intr + 130806 130931  126  2  0   73   86   250 0.999  24.18
 5.21 Intr + 131125 131214   90  0  0  118   76   155 0.978  17.49
 5.22 Intr + 131585 131743  159  1  0  -24   84   271 0.995  15.68
 5.23 Intr + 141529 141690  162  0  0   71  105   271 0.994  27.27
 5.24 Intr + 141929 142005   77  1  2  114   96   176 0.999  19.31
 5.25 Intr + 142256 142373  118  2  1   60  113    91 0.996   9.27
 5.26 Intr + 143304 143441  138  2  0  121   86   117 0.987  15.46
 5.27 Intr + 144159 144251   93  2  0  133   44   158 0.402  16.06
 5.28 Intr + 167031 167145  115  2  1   59   81    48 0.049   1.22
 5.29 Term + 177805 177842   38  2  2  106   50    42 0.224  -0.30
 5.30 PlyA + 179374 179379    6                               1.05

 6.03 PlyA - 179444 179439    6                               1.05
 6.02 Term - 190532 190418  115  1  1   80   54    84 0.441   2.24
 6.01 Init - 199807 199737   71  1  2   94   97    29 0.598   4.92
 6.00 Prom - 210030 209991   40                              -1.66

 7.02 PlyA - 210402 210397    6                               1.05
 7.01 Term - 215411 215255  157  1  1   97   54   105 0.228   5.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  25267  24743  525  1  0   70   49   310 0.906  21.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:26429921_26674198|GENSCAN_predicted_peptide_1|367_aa
MEKEETGNDQDVGTMMWQETDLDVQKKSVQIRRKWEWEEVCKARRTEERLLPPEAGPMPK
HIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSK
SEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNK
CFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTS
GEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQQKARDMYAEERK
RQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKRADWLA
RLGTASA

>gi568815597f:26429921_26674198|GENSCAN_predicted_CDS_1|1104_bp
atggagaaggaagaaacggggaatgatcaagatgtgggcaccatgatgtggcaggaaacc
gacttagatgttcagaagaagtcagtgcagatacggaggaaatgggaatgggaagaagtc
tgcaaagccaggagaaccgaggaaaggcttttgcctccagaggcaggcccaatgccgaaa
cacattgcattcataatggacgggaaccgtcgctatgccaagaagtgccaggtggagcgg
caggaaggccactcacagggcttcaacaagctagctgagactctgcggtggtgtttgaac
ctgggcatcctagaggtgacagtctacgcattcagcattgagaacttcaaacgctccaag
agtgaggtagacgggcttatggatctggcccggcagaagttcagccgcttgatggaagaa
aaggagaaactgcagaagcatggggtgtgtatccgggtcctgggcgatctgcacttgttg
cccttggatctccaggagctgattgcacaagctgtacaggccacgaagaactacaacaag
tgtttcctgaatgtctgttttgcatacacatcccgtcatgagatcagcaatgctgtgaga
gagatggcctggggggtggagcaaggcctgttggatcccagtgatatctctgagtctctg
cttgataagtgcctctataccaaccgctctcctcatcctgacatcttgatacggacttct
ggagaagtgcggctgagtgacttcttgctatggcagacctctcactcctgcctggtgttc
caacccgttctgtggccagagtatacattttggaacctcttcgaggccatcctgcagttc
cagatgaaccatagcgtgcttcagcagaaggcccgagacatgtatgcagaggagcggaag
aggcagcagctggagagggaccaggctacagtgacagagcagctgctgcgagaggggctc
caagccagtggggacgcccagctccgaaggacacgcttgcacaaactctcggccagacgg
gaagagcgagtccaaggcttcctgcaggccttggaactcaagcgagctgactggctggcc
cgtctgggcactgcatcagcctga

>gi568815597f:26429921_26674198|GENSCAN_predicted_peptide_2|80_aa
MPKRKAEGDAKGDKAKVKDEKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKEGNNPA
ENGDAKTDQAQKAEGAGDAK

>gi568815597f:26429921_26674198|GENSCAN_predicted_CDS_2|243_bp
atgcccaagagaaaggctgaaggggatgctaagggagataaagcaaaggtgaaggacgaa
aaacctgctcctccaaagccagagcccaagcctaaaaaggcccctgcaaagaagggagag
aaggtacccaaagggaaaaagggaaaagctgatgctggcaaggaggggaataaccctgca
gaaaatggagatgccaaaacagaccaggcacagaaagctgaaggtgctggagatgccaag
tga

>gi568815597f:26429921_26674198|GENSCAN_predicted_peptide_3|244_aa
MATSTPLLDPSSEGGRVSKADRQRLLGASCESPPSAPRSLLAPSRRCPLRPHGGGAEPSS
APHLGGGARGMGLLGPAPQPRQGYGPTSRPGASLGLNRRSPRRPSTPPAGSRIPHYPADP
NPCSRDSPATLEELSWGRPALPQVTRCAPGGHLASRQLEPAPAQARLNPGPRLLRAQEER
PVQLPSAPARGEGGGSGLQRCGPRSSDPGPSPPRGKKEASASASFPERCHPHSGPLTAGP
GHCA

>gi568815597f:26429921_26674198|GENSCAN_predicted_CDS_3|735_bp
atggcaacctcaaccccactcctggaccctagctcggaagggggcagggtatcgaaagcc
gatcgccagaggctcctcggtgcctcgtgcgagtccccgccgtcagccccgaggagcctc
ctggcaccaagcaggcgctgcccccttcggccacacggtggcggcgcagagccgagctcc
gcgccccacctgggaggcggcgcccgcgggatggggctcctcggcccagctccccagcct
cgacaaggatacggcccgacatccaggccaggagcgtcgctggggcttaaccgccgttcc
ccaaggcgcccctccactcctccagcgggctcccgcatcccccattatccggcggacccc
aacccctgctcacgtgactcgcccgccaccctcgaagaactctcgtggggccgccccgcc
ctgccgcaggtcacgcgctgcgcacctggagggcatctggccagccgccagctagagcct
gcccctgctcaggctcggctcaacccgggcccgcgcctgctccgagcccaggaagagcgt
cctgtccagctcccaagtgcgccggcccgtggggaaggaggcgggagtgggctccagcgg
tgcggccctcgctcctccgacccggggccctctccacctcgggggaagaaagaggcctct
gcctccgcctccttccctgagcgctgccaccctcactccggccctctgaccgcgggtccc
ggacattgcgcttag

>gi568815597f:26429921_26674198|GENSCAN_predicted_peptide_4|100_aa
MYHRMDKTGVLLKMSDSNLDSSKKNFFEGEVADEESVILTLLPVKDDPNMEQTEPSVSST
SDVKLEKPMKYNQGTEDNMLCPNCAKKNKKMMKRLMTIEK

>gi568815597f:26429921_26674198|GENSCAN_predicted_CDS_4|303_bp
atgtatcaccgaatggacaagacaggggtgttgctgaaaatgtcagactcaaatttggat
agcagcaagaagaatttctttgagggggaagtagctgatgaggaaagtgtgattttgaca
ttgctgccagttaaagatgacccaaatatggaacaaacagaaccaagtgtttcttcaact
tctgatgtcaaactggagaaacctatgaaatacaatcaaggcacagaagataatatgtta
tgccccaactgtgctaagaagaataagaagatgatgaaaagattaatgacaatagagaag
tag

>gi568815597f:26429921_26674198|GENSCAN_predicted_peptide_5|968_aa
MPLAQLKEPWPLMELVPLDPENGQTSGEEAGLQPSKHDEMSTSPGTQLMASEFRAECGPE
TWSLPCMAEEEELGWALGHRPCSLRNWHLAGTQKAGFGQLEKELGLPGRKRDLGFGIWLL
AAIVWIAIQDLCEVLGQAFCPPYPSWGLGLAAFFGAAEQGRTGGGPLVPAFWAAIVGTAA
RTHSSALNPFLGIPALLPARVSARKQRPRISQTSLPVPGPGSGPQRDSDEGVLKEISITH
HVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVR
TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL
AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY
MAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTE
AQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDT
FYFDTEFTSRTPKDSPGIPPSAGAHQLFRGFSFVATGLMEDDGKPRAPQAPLHSVVQQLH
GKNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ
HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS
QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR
QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETA
KDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSS
KPTPQLKPIESSILAQRREVRSPSAQPPPRLGGVPNSSLRTGHDDNGGFVEQKGGKGSCS
ITEAEVQK

>gi568815597f:26429921_26674198|GENSCAN_predicted_CDS_5|2907_bp
atgccgctcgcccagctcaaggagccctggccgctcatggagctagtgcctctggacccg
gagaatggacagacctcaggggaagaagctggacttcagccgtccaagcatgacgagatg
agcacgtccccgggaacccagctgatggcatctgagttcagggctgagtgtggaccagag
acatggtcattgccgtgcatggccgaggaagaagagttggggtgggctctagggcacagg
ccatgttccctgcggaactggcatttggctgggactcaaaaggcaggatttgggcagctg
gagaaagaattgggccttccaggcagaaagcgggatttgggatttgggatttggctttta
gcagcaatagtgtggatagccatccaggacctctgtgaggtccttggtcaggctttctgc
ccgccttacccatcctggggcttgggactggcagccttcttcggggcagctgagcagggc
aggaccggaggggggccactggtgcctgctttctgggctgccattgtgggtacagcagca
agaacccacagctctgcccttaaccccttcctggggatccctgccctgctgcctgcccgt
gtgtctgccaggaagcagcggcccaggatcagccagacctctctgcctgtccctggccct
ggctctggcccccagcgggactcggatgagggcgtcctcaaggagatctccatcacgcac
cacgtcaaggctggctctgagaaggctgatccatcccatttcgagctcctcaaggttctg
ggccagggatcctttggcaaagtcttcctggtgcggaaagtcacccggcctgacagtggg
cacctgtatgctatgaaggtgctgaagaaggcaacgctgaaagtacgtgaccgcgtccgg
accaagatggagagagacatcctggctgatgtaaatcacccattcgtggtgaagctgcac
tatgccttccagaccgagggcaagctctatctcattctggacttcctgcgtggtggggac
ctcttcacccggctctcaaaagaggtgatgttcacggaggaggatgtgaagttttacctg
gctgagctggctctgggcctggatcacctgcacagcctgggtatcatttacagagacctc
aagcctgagaacatccttctggatgaggagggccacatcaaactcactgactttggcctg
agcaaagaggccattgaccacgagaagaaggcctattctttctgcgggacagtggagtac
atggcccctgaggtcgtcaaccgccagggccactcccatagtgcggactggtggtcctat
ggggtgttgatgtttgagatgctgacgggctccctgcccttccaggggaaggaccggaag
gagaccatgacactgattctgaaggcgaagctaggcatgccccagtttctgagcactgaa
gcccagagcctcttgcgggccctgttcaagcggaatcctgccaaccggctcggctccggc
cctgatggggcagaggaaatcaagcggcatgtcttctactccaccattgactggaataag
ctataccgtcgtgagatcaagccacccttcaagccagcagtggctcagcctgatgacacc
ttctactttgacaccgagttcacgtcccgcacacccaaggattccccaggcatccccccc
agcgctggggcccatcagctgttccggggcttcagcttcgtggccaccggcctgatggaa
gacgacggcaagcctcgtgccccgcaggcacccctgcactcggtggtacagcaactccat
gggaagaacctggtttttagtgacggctacgtggtaaaggagacaattggtgtgggctcc
tactctgagtgcaagcgctgtgtccacaaggccaccaacatggagtatgctgtcaaggtc
attgataagagcaagcgggatccttcagaagagattgagattcttctgcggtatggccag
caccccaacatcatcactctgaaagatgtgtatgatgatggcaaacacgtgtacctggtg
acagagctgatgcggggtggggagctgctggacaagatcctgcggcagaagttcttctca
gagcgggaggccagctttgtcctgcacaccattggcaaaactgtggagtatctgcactca
cagggggttgtgcacagggacctgaagcccagcaacatcctgtatgtggacgagtccggg
aatcccgagtgcctgcgcatctgtgactttggttttgccaaacagctgcgggctgagaat
gggctcctcatgacaccttgctacacagccaactttgtggcgcctgaggtgctgaagcgc
cagggctacgatgaaggctgcgacatctggagcctgggcattctgctgtacaccatgctg
gcaggatatactccatttgccaacggtcccagtgacacaccagaggaaatcctaacccgg
atcggcagtgggaagtttaccctcagtgggggaaattggaacacagtttcagagacagcc
aaggacctggtgtccaagatgctacacgtggatccccaccagcgcctcacagctaagcag
gttctgcagcatccatgggtcacccagaaagacaagcttccccaaagccagctgtcccac
caggacctacagcttgtgaagggagccatggctgccacgtactccgcactcaacagctcc
aagcccaccccccagctgaagcccatcgagtcatccatcctggcccagcggcgagaagtg
aggagcccctctgcccagccaccacctcgtctgggaggtgtacccaacagctcattgaga
acgggccatgatgacaatggcggttttgtggaacagaaaggggggaaagggtcttgctcc
atcaccgaggctgaagtgcagaagtga

>gi568815597f:26429921_26674198|GENSCAN_predicted_peptide_6|61_aa
MEIWRNLKPSKNLIAIVSIEEQPRTTGSRCCPLPPTVLCAPAGLREGRRGRSCRRGRGNQ
S

>gi568815597f:26429921_26674198|GENSCAN_predicted_CDS_6|186_bp
atggaaatttggaggaatctgaagcctagcaagaatctcatagcgattgtcagcatagaa
gaacagccaagaacaacgggttcccgctgctgccccctgccgcccacagtgctctgcgcc
cctgcggggctccgagaggggcgtcgggggcgcagctgccgccggggccgtgggaaccag
agctga

>gi568815597f:26429921_26674198|GENSCAN_predicted_peptide_7|52_aa
XSWWHFCNSWNLETYGSECSSKAGTPEGSPRAKAGRSTLQGTSDNISNISSI

>gi568815597f:26429921_26674198|GENSCAN_predicted_CDS_7|159_bp
nnatcctggtggcatttctgcaactcctggaacctggagacatatggatcagagtgctca
tccaaggcaggaaccccagaaggttctccccgggcaaaggcagggcgctccaccctccag
ggtacctctgacaacatcagtaatatcagcagcatctga