GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:32:12

Sequence gi568815596f:236480466_236681551 : 201086 bp : 46.39% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -    362    357    6                               1.05
 1.11 Term -   3549   3541    9  0  0  124   36     0 0.326  -3.41
 1.10 Intr -   6435   6364   72  0  0   89  115    55 0.883   7.90
 1.09 Intr -  17022  16698  325  2  1  104   79   378 0.578  34.28
 1.08 Intr -  23086  22832  255  0  0   83   57    89 0.059   1.86
 1.07 Intr -  23985  23799  187  1  1   57   -2   142 0.067   0.85
 1.06 Intr -  26856  26792   65  2  2   87   96    88 0.983   7.86
 1.05 Intr -  36492  36393  100  1  1   93   70    67 0.762   4.57
 1.04 Intr -  42591  42463  129  1  0   96  115     1 0.875   4.27
 1.03 Intr -  51293  51194  100  2  1  111   76    32 0.938   3.98
 1.02 Intr -  53256  53051  206  1  2   47   79   112 0.349   5.12
 1.01 Init -  56105  55949  157  2  1   73   67   133 0.861   9.77
 1.00 Prom -  61366  61327   40                              -4.56

 2.06 PlyA -  61533  61528    6                               1.05
 2.05 Term -  64245  63931  315  0  0  123   43   174 0.971  11.34
 2.04 Intr -  70014  69648  367  2  1  -10  -39   328 0.011   5.45
 2.03 Intr -  72692  72633   60  1  0  104   41    71 0.227   1.85
 2.02 Intr -  73531  73502   30  0  0   66   75    77 0.086   1.45
 2.01 Init -  82546  82434  113  1  2   77   16    88 0.058   0.18
 2.00 Prom -  84994  84955   40                              -4.36

 3.00 Prom +  89323  89362   40                              -3.26
 3.01 Init +  91023  91053   31  2  1   91   49    36 0.709   0.06
 3.02 Intr +  93692  93804  113  0  2   87   36   141 0.754   8.90
 3.03 Intr +  94286  94411  126  1  0   21   68   112 0.580   3.38
 3.04 Intr +  97452  97500   49  2  1   82   24     7 0.111  -8.05
 3.05 Intr +  97962  98102  141  1  0   27   66   123 0.516   4.32
 3.06 Term +  99975 101089 1115  1  2   96   39  2073 0.787 195.41
 3.07 PlyA + 101771 101776    6                               1.05

 4.03 PlyA - 101861 101856    6                              -0.45
 4.02 Term - 103539 103352  188  1  2  102   48   151 0.912  10.15
 4.01 Init - 103714 103594  121  1  1   96  105   -44 0.631  -1.54
 4.00 Prom - 106260 106221   40                              -3.56

 5.04 PlyA - 107018 107013    6                               1.05
 5.03 Term - 111648 111447  202  2  1   48   37   162 0.199   3.96
 5.02 Intr - 112505 112326  180  1  0    2   61   162 0.105   3.88
 5.01 Init - 125076 124946  131  0  2   71   53   135 0.587   7.92
 5.00 Prom - 129788 129749   40                              -4.86

 6.10 PlyA - 130269 130264    6                               1.05
 6.09 Term - 145451 145144  308  0  2  113   46   135 0.673   7.08
 6.08 Intr - 145958 145806  153  0  0   54   72    56 0.357   0.64
 6.07 Intr - 147696 147643   54  1  0   99  100    -4 0.280   0.85
 6.06 Intr - 147920 147855   66  0  0  104  100    12 0.844   2.88
 6.05 Intr - 156214 156051  164  0  2  103    0    99 0.027   2.22
 6.04 Intr - 164254 164045  210  0  0   29   31   154 0.065   1.83
 6.03 Intr - 188215 187988  228  0  0   91   43    80 0.152   0.78
 6.02 Intr - 191792 191618  175  0  1   46   55    69 0.310  -1.60
 6.01 Init - 193512 193374  139  0  1   90   98    62 0.470   7.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  12308  12413  106  1  1   67   59   132 0.870   8.58


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:236480466_236681551|GENSCAN_predicted_peptide_1|534_aa
MGYPQATTKFMNSAEAFLVPVISQSSLLELNVTASHPTFYSSHCGSNKLPAGGKVTITMP
LSCDKLLVTRPLYDCSEFGAFKSDPHGPHARRFQLAEACDAMKLSRTGTRQLFPVGLCIS
TGWPHPRVYLCGAVSNTQLQTSAYLRCNAFGHLAYGVQLPFCELERPVWKRTKESQGRTG
FLSPTFHEEFNPANSHSVLQAYLRNVLELNQSQPETSTSLSLCLEVPIKSREQRKSFPEG
EEKRESSQQCRTRKIKTYFHAETRTGMLLAALLTAAKKAETTQVSMGWRMDKQNVVYLYK
GNLAIERNEVQSMRQQGFPRQTAVGEERNGRTRKAQATRTVFDQKFQLWVSSVRPWKSPA
SLTQLKPMRALTWSDWAPLDGSAHSRSRHPENLAVLCPIRMYNKMWHQTQEALGALLDKE
PQKMIEPQRNQVFIFQTLATFYVKYVQIFRNLENVYDQFVHPQKRILIRKVLDGVMGRIL
ELKNEMVELELTEFHYFDDILQDLKLAPVWRRFHQRKETEKLREEEMIFLGMGK

>gi568815596f:236480466_236681551|GENSCAN_predicted_CDS_1|1605_bp
atgggttacccacaagctacaaccaagttcatgaacagtgcagaagcctttcttgttccc
gtcatatcacagagctctctgcttgaactcaacgtcacggcttctcatcccaccttttac
tccagccactgtggcagcaacaagcttcctgcaggagggaaggtaaccatcaccatgcca
ttgtcatgtgataaactacttgtcacaaggccactgtacgactgttcagagtttggtgcc
tttaaatctgatccccatggaccacacgctagaagattccagttggcagaagcatgtgat
gccatgaaactcagcaggacagggacaaggcagctgtttcctgtagggctgtgcatctcc
acaggctggcctcaccccagggtctacctttgtggagctgtatctaacacacagctgcag
acatctgcttacctcagatgcaatgcctttgggcacctggcctatggagttcagctacca
ttctgtgagctggagaggcctgtgtggaaaagaactaaggaaagccaaggaagaactgga
ttcctcagtccaacatttcacgaggaatttaatcctgccaacagccactcagttctgcag
gcctacctgaggaacgtgttggaactgaatcaaagtcaaccagaaacttccacttccctt
tcactgtgcctagaagtgcccatcaaatcacgagagcaacggaagagcttcccggagggc
gaggaaaagagggaaagtagccagcaatgtcgaacgcggaaaataaagacatatttccac
gcagaaactcgcacaggaatgcttctagcagcattactcacagcagcaaagaaggcggaa
acaacccaagtgtcaatgggctggcgaatggataaacaaaatgtggtgtatctgtacaaa
ggaaacttagcaatagaaagaaatgaagtacaaagtatgcgacaacagggattccccaga
cagactgcagttggggaagaaagaaatggcaggacccggaaggctcaagccaccaggact
gtctttgaccaaaaattccagttatgggtcagctccgtgaggccctggaaaagtcctgct
tctctgacccaactgaagccaatgagggctctgacctggagcgactgggctcccctggat
ggttctgcccacagcaggtctagacatccagaaaatctggctgtgctctgccccatcaga
atgtataataagatgtggcatcagacccaagaagccctcggtgctttactcgataaagag
cctcagaagatgattgaaccacaaagaaatcaggttttcatctttcaaacattagccacc
ttctacgtaaagtatgtgcagatctttagaaacctagagaatgtctacgaccagttcgtc
cacccccagaaacgaatactgatcaggaaagtcctggacggggtgatgggccgcatcctg
gagctgaagaacgagatggtggagctggaactcacggagttccattatttcgatgatatc
ctgcaggatctcaagctggcccccgtttggcgacgtttccatcaacgtaaggaaactgaa
aaactgagagaagaggagatgatcttcctgggtatgggaaaataa

>gi568815596f:236480466_236681551|GENSCAN_predicted_peptide_2|294_aa
MPSNCTPTRRAYMKITECEQGCGTTRILMHQCFSSATWTLTNYDADSRVHCKAANRRQLD
LLRKGGARRCCHQSACILLPDDVKNVDTSALTTPMETERFSFAKVSSVHTGLADVCAAGY
PATPNISHADLVLQSHTATLRVQWTPGAGTKKDVVEFSSHTAFTVQNGQEEPAPRMALGM
ETDYAPTGIHLGYKTTIHPGAQPRIPGTVFILPSSSTSARPYSHRLRPSGISPACPELSN
PSYEPSALQGLCSHSSPPALALVSLPPDLAVIFSDLLRQEATDHTMHMMHTTQS

>gi568815596f:236480466_236681551|GENSCAN_predicted_CDS_2|885_bp
atgccatccaactgcacaccaaccagaagggcttacatgaaaattactgaatgtgaacaa
ggatgtggaaccaccagaattctcatgcaccagtgcttctccagcgctacatggaccctc
accaactacgatgcagacagcagggtgcactgcaaagcagccaaccgcaggcaactggat
ctcctccgcaaaggtggagccagaaggtgctgccatcaatcagcatgtattttactgccc
gatgacgtgaagaatgttgacacatcagccctaactacaccaatggaaactgaaaggttt
tcttttgccaaggtgagcagcgtgcacactggcctggcagatgtgtgcgcagccgggtac
cctgccacccccaacatctcccatgcggacctcgtcttgcaaagccatactgccacatta
cgtgtccagtggacaccaggggcaggcacgaagaaggatgttgttgaattctcctcacac
accgccttcactgtgcagaatggccaggaagagccagcccctcgcatggccttagggatg
gaaacagactatgcacccacaggaatccacctcggttacaagaccaccatccatccaggg
gctcagcccagaatcccggggaccgtcttcattctgccttcgtcttcaacatctgctcgt
ccctattcccatcgactcaggccttcaggcatctctccagcctgccctgagctctccaac
ccaagctacgagccctcagccttgcagggcctgtgctcgcacagcagccccccagccctg
gcactggtctccctgcctccagacctagcagtcattttctccgacctgctccgacaggaa
gccactgatcatacgatgcatatgatgcatacaacgcaaagctga

>gi568815596f:236480466_236681551|GENSCAN_predicted_peptide_3|524_aa
MPVRHTQGFGEQCLLEQEAQSVNTSSVTISEKSLLDARLRCWPQSLVLAACCSTVVVKDT
WLMNKTSQKREVHLRESPAIDKRSPSTIWALWGGPPFKLLCSPGLWVGDSEDGQASRCRT
SVVPSMEGFQSVEGMRLSWEAQPFLSAVEDTESGHLIARLRTMDLHLFDYSEPGNFSDIS
WPCNSSDCIVVDTVMCPNMPNKSVLLYTLSFIYIFIFVIGMIANSVVVWVNIQAKTTGYD
THCYILNLAIADLWVVLTIPVWVVSLVQHNQWPMGELTCKVTHLIFSINLFGSIFFLTCM
SVDRYLSITYFTNTPSSRKKMVRRVVCILVWLLAFCVSLPDTYYLKTVTSASNNETYCRS
FYPEHSIKEWLIGMELVSVVLGFAVPFSIIAVFYFLLARAISASSDQEKHSSRKIIFSYV
VVFLVCWLPYHVAVLLDIFSILHYIPFTCRLEHALFTALHVTQCLSLVHCCVNPVLYSFI
NRNYRYELMKAFIFKYSAKTGLTKLIDASRVSETEYSALEQSTK

>gi568815596f:236480466_236681551|GENSCAN_predicted_CDS_3|1575_bp
atgcctgtgcgacacacgcagggctttggggagcagtgcctcctggaacaagaggctcag
tccgtcaacaccagctcggtgacgatttcagaaaagtctctcctggacgcccgtctccgc
tgctggccacagtcgctggtcttggctgcttgctgcagcacggtcgttgtcaaggatact
tggttgatgaataaaacatcccagaaacgagaggtgcatctccgagaaagtcctgcaatt
gacaagaggagccccagtaccatctgggctctgtggggcggtcctccattcaagctcctc
tgctccccgggactctgggtgggtgactctgaggacggccaggcctcccgctgcaggacc
agcgtggttccctccatggaaggctttcagagtgtggaggggatgcggctgtcttgggag
gcccagccctttctgtcagccgtggaggacactgagtcaggtcatttgattgcccgcctc
agaacgatggatctgcatctcttcgactactcagagccagggaacttctcggacatcagc
tggccatgcaacagcagcgactgcatcgtggtggacacggtgatgtgtcccaacatgccc
aacaaaagcgtcctgctctacacgctctccttcatttacattttcatcttcgtcatcggc
atgattgccaactccgtggtggtctgggtgaatatccaggccaagaccacaggctatgac
acgcactgctacatcttgaacctggccattgccgacctgtgggttgtcctcaccatccca
gtctgggtggtcagtctcgtgcagcacaaccagtggcccatgggcgagctcacgtgcaaa
gtcacacacctcatcttctccatcaacctcttcggcagcattttcttcctcacgtgcatg
agcgtggaccgctacctctccatcacctacttcaccaacacccccagcagcaggaagaag
atggtacgccgtgtcgtctgcatcctggtgtggctgctggccttctgcgtgtctctgcct
gacacctactacctgaagaccgtcacgtctgcgtccaacaatgagacctactgccggtcc
ttctaccccgagcacagcatcaaggagtggctgatcggcatggagctggtctccgttgtc
ttgggctttgccgttcccttctccattatcgctgtcttctacttcctgctggccagagcc
atctcggcgtccagtgaccaggagaagcacagcagccggaagatcatcttctcctacgtg
gtggtcttccttgtctgctggctgccctaccacgtggcggtgctgctggacatcttctcc
atcctgcactacatccctttcacctgccggctggagcacgccctcttcacggccctgcat
gtcacacagtgcctgtcgctggtgcactgctgcgtcaaccctgtcctctacagcttcatc
aatcgcaactacaggtacgagctgatgaaggccttcatcttcaagtactcggccaaaaca
gggctcaccaagctcatcgatgcctccagagtctcagagacggagtactctgccttggag
cagagcaccaaatga

>gi568815596f:236480466_236681551|GENSCAN_predicted_peptide_4|102_aa
MEPAPADSRPQGRRRVWDSRPRCPGPCGRWKIPPKQKVPPVWEEAAGAAPRLQNSRKTEK
GQTSLTIQRGKSSSKSHMNWGGRGALQKDRQVLSDIHVDTQA

>gi568815596f:236480466_236681551|GENSCAN_predicted_CDS_4|309_bp
atggagcctgcccctgcagacagcagaccccagggacgtcggagggtctgggacagtagg
ccacggtgccctgggccctgtgggagatggaaaatccccccaaagcaaaaggtgccacct
gtgtgggaggaggcagctggggcagcccccaggctgcagaacagcagaaaaacagaaaag
ggccagaccagtctcaccatccagcgaggcaaaagcagcagcaagagccacatgaactgg
ggtggcagaggagccctgcagaaggatcgacaggtcctctcagacatccacgtagacaca
caagcctga

>gi568815596f:236480466_236681551|GENSCAN_predicted_peptide_5|170_aa
MILGYSRPSRGMHRRRTTKEVVGEDKREIKGYREGSAAGDPGERGTLKPSVLHFRENYSS
LRVKGDLDGQDEVRDKLTRRHERDRMKAAAPVVNDREDWPAWRRDIEQFFSGKIGQPEKK
APQPLTSRETTGGHLETSVKFTGHQAQLSTELPAGLLVLIVKCDSIAKDQ

>gi568815596f:236480466_236681551|GENSCAN_predicted_CDS_5|513_bp
atgatactcggctacagccgccctagcagaggaatgcatcgccggaggacaaccaaggaa
gttgtgggcgaggacaaaagggaaatcaaaggctacagagaaggatccgctgctggagac
ccaggagagaggggcacactgaagccatcagtgctgcactttcgggagaactactccagc
cttcgtgtgaagggtgacttggatggacaagacgaggtcagagacaaactgacgaggaga
cacgagagagacaggatgaaggcggcagccccggtggtcaatgacagggaggactggcct
gcgtggagaagggacattgaacaatttttctccggaaaaataggccagcccgagaagaag
gcccctcaaccactaacatccagggagaccacagggggacatctggagacctcagtgaaa
ttcactggtcaccaagcccagctcagcacagagcttccagccgggcttctagtcctcatc
gtaaaatgtgactccatcgccaaagatcagtag

>gi568815596f:236480466_236681551|GENSCAN_predicted_peptide_6|498_aa
MASAGPPRYPGAGVHDMPQSRRFGSPTGQCTGQPVNKSSSSPARLDTRVDARHNLPPIHT
CEGSCARGKDQLEPRPVLSPKCDHRPRLPHIPRTLSMGSFSSCQRWNIGEVITKSPTSPP
AASSSRMTGAVSPGGQSLGSAKNTVNLNTTNLCGWLNHNRKAQCLHPGVCKFTQVCAVTY
RAESSTSWGSDLETKLNGGWLLGEKQGLDGNDEGIKGGCGSWYQCCRCGVSFSQDVLCSP
PRVLCAHGCLMFLQASNQLKIVSKRRLPACLVDLGMNVDSQGMTEHPTTALPLFSCPISI
AAALQSVLRCTVYSRSRDYPGHYCPTAGTSLKWPGPSPAGHCLEEGSEVHNGEHPGYIAV
LVPERKEPPGTPLWAFLTPLHSFRSGHGSSHKGNKVVFIIIASSLLGLREALTLEWLMNW
IKNLEIVRGKSLSESLVTCVISFSITNKCPGSQQGPELVGYKTGGVTPGLAAHRVDACAS
CMDALTSCLTDEGVTSSL

>gi568815596f:236480466_236681551|GENSCAN_predicted_CDS_6|1497_bp
atggcatctgcggggcctcccaggtaccctggtgcaggtgtgcatgacatgccccagagc
cggcgatttgggagccccactggtcagtgcactggccagcctgtgaacaagagctcctca
tccccagcacggctggacaccagagttgatgccaggcacaacctgcctcctatacacaca
tgtgagggctcctgtgcccgtgggaaagaccagctggagccaagacctgtcctcagcccc
aagtgtgaccaccgccccaggcttccccacatcccccgcacactcagcatgggctcattc
agcagctgtcagagatggaatatcggagaagttatcaccaaatctccaacctcccctcca
gctgccagctccagcagaatgacaggggcagtttccccaggtgggcagagtttgggttct
gccaagaacacagtgaatttaaacaccaccaacttgtgtggctggctgaaccacaataga
aaagcccagtgcctgcatcccggggtgtgcaaatttactcaagtgtgtgccgtgacctac
agagctgagagcagtacctcctggggcagtgacctggagaccaagctgaatggtggatgg
cttctgggcgagaagcagggcctggatggaaatgatgagggcatcaagggaggatgtggg
tcgtggtatcagtgctgccgctgcggtgtcagcttctctcaagatgtcctctgctctcct
ccaagagtcctctgtgctcatggctgcctcatgtttctacaagcttcaaatcaactgaaa
attgtttcaaaaaggaggcttccggcctgcctggtggacttgggaatgaacgtggactca
caaggaatgactgagcatcccacaacagctcttcctctgttttcatgtcccatcagcatt
gctgctgccctgcaaagcgttttgagatgcacggtctattctagaagccgagactatccc
ggccactactgtcccacagcggggacatccctgaaatggcctggtccctcccctgcaggt
cactgcctggaggaaggctcggaagtccataatggtgaacacccaggctacattgcagtc
ctggttccagagagaaaggagccacccgggacgcctctctgggcctttctcacacctcta
cactccttccgcagtggacatggatccagtcacaagggcaacaaggtggtttttattatt
attgccagctccttacttggacttcgtgaagcactcactctagaatggctgatgaattgg
attaaaaacctggaaattgttagagggaaatcattgtcagagagcctggtcacatgtgta
atcagtttctctattactaacaaatgtccgggaagccaacaaggcccagagttagtgggc
tacaaaacagggggagtgacgcctggtcttgctgcccacagagtggacgcctgcgccagc
tgcatggatgccctcacttcctgcctgacggatgagggtgtcacctcttcactgtga