Result of FASTA (omim) for pF1KB4171
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4171, 1151 aa
  1>>>pF1KB4171 1151 - 1151 aa - 1151 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 15.7310+/-0.000542; mu= -22.9035+/- 0.034
 mean_var=766.3066+/-161.206, 0's: 0 Z-trim(124.0): 38  B-trim: 889 in 1/59
 Lambda= 0.046331
 statistics sampled from 44847 (44891) to 44847 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.526), width:  16
 Scan time: 12.680

The best scores are:                                      opt bits E(85289)
XP_005269161 (OMIM: 601734) PREDICTED: SWI/SNF com (1151) 7744 533.8 2.2e-150
NP_001123892 (OMIM: 601734) SWI/SNF complex subuni (1152) 7732 533.0 3.9e-150
XP_005269159 (OMIM: 601734) PREDICTED: SWI/SNF com (1244) 7451 514.3 1.9e-144
NP_001317217 (OMIM: 601734) SWI/SNF complex subuni (1245) 7439 513.5 3.3e-144
NP_620706 (OMIM: 601734) SWI/SNF complex subunit S (1130) 7433 513.0  4e-144
XP_016875373 (OMIM: 601734) PREDICTED: SWI/SNF com (1129) 7432 513.0 4.2e-144
XP_011536995 (OMIM: 601734) PREDICTED: SWI/SNF com ( 994) 5707 397.6  2e-109
NP_003066 (OMIM: 601734) SWI/SNF complex subunit S (1214) 3970 281.6   2e-74
XP_005269160 (OMIM: 601734) PREDICTED: SWI/SNF com (1213) 3964 281.2 2.7e-74
XP_016875375 (OMIM: 601734) PREDICTED: SWI/SNF com (1099) 3933 279.1   1e-73
XP_016875374 (OMIM: 601734) PREDICTED: SWI/SNF com (1121) 3852 273.7 4.5e-72
XP_016875376 (OMIM: 601734) PREDICTED: SWI/SNF com ( 963) 3511 250.8 2.9e-65
NP_003065 (OMIM: 601732) SWI/SNF complex subunit S (1105) 2810 204.0 4.1e-51
XP_011532336 (OMIM: 601732) PREDICTED: SWI/SNF com ( 996) 2429 178.5 1.8e-43


>>XP_005269161 (OMIM: 601734) PREDICTED: SWI/SNF complex  (1151 aa)
 initn: 7744 init1: 7744 opt: 7744  Z-score: 2820.7  bits: 533.8 E(85289): 2.2e-150
Smith-Waterman score: 7744; 100.0% identity (100.0% similar) in 1151 aa overlap (1-1151:1-1151)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB4 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB4 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB4 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB4 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB4 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB4 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB4 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB4 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB4 FPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS
             1090      1100      1110      1120      1130      1140

             1150 
pF1KB4 PGTVTPVPPPQ
       :::::::::::
XP_005 PGTVTPVPPPQ
             1150 

>>NP_001123892 (OMIM: 601734) SWI/SNF complex subunit SM  (1152 aa)
 initn: 4089 init1: 3971 opt: 7732  Z-score: 2816.3  bits: 533.0 E(85289): 3.9e-150
Smith-Waterman score: 7732; 99.9% identity (99.9% similar) in 1152 aa overlap (1-1151:1-1152)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580        590         
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL-TSASQQMLNFPDKGKEKP
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
NP_001 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
              550       560       570       580       590       600

     600       610       620       630       640       650         
pF1KB4 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
              610       620       630       640       650       660

     660       670       680       690       700       710         
pF1KB4 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
              670       680       690       700       710       720

     720       730       740       750       760       770         
pF1KB4 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
              730       740       750       760       770       780

     780       790       800       810       820       830         
pF1KB4 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
              790       800       810       820       830       840

     840       850       860       870       880       890         
pF1KB4 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
              850       860       870       880       890       900

     900       910       920       930       940       950         
pF1KB4 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
              910       920       930       940       950       960

     960       970       980       990      1000      1010         
pF1KB4 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
              970       980       990      1000      1010      1020

    1020      1030      1040      1050      1060      1070         
pF1KB4 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
             1030      1040      1050      1060      1070      1080

    1080      1090      1100      1110      1120      1130         
pF1KB4 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP
             1090      1100      1110      1120      1130      1140

    1140      1150 
pF1KB4 SPGTVTPVPPPQ
       ::::::::::::
NP_001 SPGTVTPVPPPQ
             1150  

>>XP_005269159 (OMIM: 601734) PREDICTED: SWI/SNF complex  (1244 aa)
 initn: 7522 init1: 7422 opt: 7451  Z-score: 2714.4  bits: 514.3 E(85289): 1.9e-144
Smith-Waterman score: 7451; 97.1% identity (98.0% similar) in 1149 aa overlap (1-1149:1-1144)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB4 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB4 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB4 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB4 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB4 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB4 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB4 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB4 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB4 FPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS
       ::::::::::::::::::::::::...:  ..   :  .:   : : : . .:    : :
XP_005 FPNQQTPPSMMPGAVPGSGHPGVAGNAP--LGLPFG--MPPPPPPPAP-SIIPFGSLADS
             1090      1100        1110        1120       1130     

             1150                                                  
pF1KB4 PGTVTPVPPPQ                                                 
        .   :.::                                                   
XP_005 ISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGS
        1140      1150      1160      1170      1180      1190     

>>NP_001317217 (OMIM: 601734) SWI/SNF complex subunit SM  (1245 aa)
 initn: 7521 init1: 3971 opt: 7439  Z-score: 2710.1  bits: 513.5 E(85289): 3.3e-144
Smith-Waterman score: 7439; 97.0% identity (97.9% similar) in 1150 aa overlap (1-1149:1-1145)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580        590         
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL-TSASQQMLNFPDKGKEKP
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
NP_001 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
              550       560       570       580       590       600

     600       610       620       630       640       650         
pF1KB4 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
              610       620       630       640       650       660

     660       670       680       690       700       710         
pF1KB4 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
              670       680       690       700       710       720

     720       730       740       750       760       770         
pF1KB4 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
              730       740       750       760       770       780

     780       790       800       810       820       830         
pF1KB4 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
              790       800       810       820       830       840

     840       850       860       870       880       890         
pF1KB4 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
              850       860       870       880       890       900

     900       910       920       930       940       950         
pF1KB4 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
              910       920       930       940       950       960

     960       970       980       990      1000      1010         
pF1KB4 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
              970       980       990      1000      1010      1020

    1020      1030      1040      1050      1060      1070         
pF1KB4 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
             1030      1040      1050      1060      1070      1080

    1080      1090      1100      1110      1120      1130         
pF1KB4 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP
       :::::::::::::::::::::::::...:  ..   :  .:   : : : . .:    : 
NP_001 PFPNQQTPPSMMPGAVPGSGHPGVAGNAP--LGLPFG--MPPPPPPPAP-SIIPFGSLAD
             1090      1100        1110        1120       1130     

    1140      1150                                                 
pF1KB4 SPGTVTPVPPPQ                                                
       : .   :.::                                                  
NP_001 SISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLG
        1140      1150      1160      1170      1180      1190     

>>NP_620706 (OMIM: 601734) SWI/SNF complex subunit SMARC  (1130 aa)
 initn: 4251 init1: 3971 opt: 7433  Z-score: 2708.4  bits: 513.0 E(85289): 4e-144
Smith-Waterman score: 7539; 98.0% identity (98.0% similar) in 1152 aa overlap (1-1151:1-1130)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580        590         
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL-TSASQQMLNFPDKGKEKP
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
NP_620 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
              550       560       570       580       590       600

     600       610       620       630       640       650         
pF1KB4 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
              610       620       630       640       650       660

     660       670       680       690       700       710         
pF1KB4 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
              670       680       690       700       710       720

     720       730       740       750       760       770         
pF1KB4 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
              730       740       750       760       770       780

     780       790       800       810       820       830         
pF1KB4 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
              790       800       810       820       830       840

     840       850       860       870       880       890         
pF1KB4 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
              850       860       870       880       890       900

     900       910       920       930       940       950         
pF1KB4 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
              910       920       930       940       950       960

     960       970       980       990      1000      1010         
pF1KB4 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
              970       980       990      1000      1010      1020

    1020      1030      1040      1050      1060      1070         
pF1KB4 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
             1030      1040      1050      1060      1070      1080

    1080      1090      1100      1110      1120      1130         
pF1KB4 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP
       :::::::::::::::::::::::::                      :::::::::::::
NP_620 PFPNQQTPPSMMPGAVPGSGHPGVA----------------------DPGTPLPPDPTAP
             1090      1100                            1110        

    1140      1150 
pF1KB4 SPGTVTPVPPPQ
       ::::::::::::
NP_620 SPGTVTPVPPPQ
     1120      1130

>>XP_016875373 (OMIM: 601734) PREDICTED: SWI/SNF complex  (1129 aa)
 initn: 7591 init1: 7411 opt: 7432  Z-score: 2708.1  bits: 513.0 E(85289): 4.2e-144
Smith-Waterman score: 7551; 98.1% identity (98.1% similar) in 1151 aa overlap (1-1151:1-1129)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB4 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB4 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB4 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB4 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB4 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB4 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB4 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB4 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB4 FPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS
       ::::::::::::::::::::::::                      ::::::::::::::
XP_016 FPNQQTPPSMMPGAVPGSGHPGVA----------------------DPGTPLPPDPTAPS
             1090      1100                            1110        

             1150 
pF1KB4 PGTVTPVPPPQ
       :::::::::::
XP_016 PGTVTPVPPPQ
     1120         

>>XP_011536995 (OMIM: 601734) PREDICTED: SWI/SNF complex  (994 aa)
 initn: 5789 init1: 3464 opt: 5707  Z-score: 2085.7  bits: 397.6 E(85289): 2e-109
Smith-Waterman score: 5707; 96.2% identity (97.3% similar) in 899 aa overlap (252-1149:1-894)

             230       240       250       260       270       280 
pF1KB4 EASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEV
                                     ::::::::::::::::::::::::::::::
XP_011                               MNEEDYEVNDDKNPVSRRKKISAKTLTDEV
                                             10        20        30

             290       300       310       320       330       340 
pF1KB4 NSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTK
               40        50        60        70        80        90

             350       360       370       380       390       400 
pF1KB4 DMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTG
              100       110       120       130       140       150

             410       420       430       440       450       460 
pF1KB4 NKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEI
              160       170       180       190       200       210

             470       480       490       500       510       520 
pF1KB4 YLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPT
              220       230       240       250       260       270

             530       540       550       560       570       580 
pF1KB4 PMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL
              280       290       300       310       320       330

              590       600       610       620       630       640
pF1KB4 -TSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLL
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLL
              340       350       360       370       380       390

              650       660       670       680       690       700
pF1KB4 EALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSG
              400       410       420       430       440       450

              710       720       730       740       750       760
pF1KB4 NPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKAD
              460       470       480       490       500       510

              770       780       790       800       810       820
pF1KB4 PAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKT
              520       530       540       550       560       570

              830       840       850       860       870       880
pF1KB4 SEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVE
              580       590       600       610       620       630

              890       900       910       920       930       940
pF1KB4 RDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELE
              640       650       660       670       680       690

              950       960       970       980       990      1000
pF1KB4 TIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQ
              700       710       720       730       740       750

             1010      1020      1030      1040      1050      1060
pF1KB4 PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA
              760       770       780       790       800       810

             1070      1080      1090      1100      1110      1120
pF1KB4 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLP
       ::::::::::::::::::::::::::::::::::::::::::::...:  ..   :  .:
XP_011 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAP--LGLPFG--MP
              820       830       840       850         860        

             1130      1140      1150                              
pF1KB4 SASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ                             
          : : :.  .:    : : .   :.::                               
XP_011 PPPPPPAPSI-IPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHP
        870        880       890       900       910       920     

>>NP_003066 (OMIM: 601734) SWI/SNF complex subunit SMARC  (1214 aa)
 initn: 7305 init1: 3755 opt: 3970  Z-score: 1457.1  bits: 281.6 E(85289): 2e-74
Smith-Waterman score: 7176; 94.4% identity (95.3% similar) in 1149 aa overlap (1-1149:1-1114)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
       ::::::::::                               :::::::::::::::::::
NP_003 LVPLQPKTPQQ------------------------------TSASQQMLNFPDKGKEKPT
              550                                     560       570

              610       620       630       640       650       660
pF1KB4 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
              580       590       600       610       620       630

              670       680       690       700       710       720
pF1KB4 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
              640       650       660       670       680       690

              730       740       750       760       770       780
pF1KB4 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
              700       710       720       730       740       750

              790       800       810       820       830       840
pF1KB4 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
              760       770       780       790       800       810

              850       860       870       880       890       900
pF1KB4 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
              820       830       840       850       860       870

              910       920       930       940       950       960
pF1KB4 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
              880       890       900       910       920       930

              970       980       990      1000      1010      1020
pF1KB4 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
              940       950       960       970       980       990

             1030      1040      1050      1060      1070      1080
pF1KB4 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
             1000      1010      1020      1030      1040      1050

             1090      1100      1110      1120      1130      1140
pF1KB4 FPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS
       ::::::::::::::::::::::::...:  ..   :  .:   : : : . .:    : :
NP_003 FPNQQTPPSMMPGAVPGSGHPGVAGNAP--LGLPFG--MPPPPPPPAP-SIIPFGSLADS
             1060      1070        1080        1090       1100     

             1150                                                  
pF1KB4 PGTVTPVPPPQ                                                 
        .   :.::                                                   
NP_003 ISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGS
        1110      1120      1130      1140      1150      1160     

>>XP_005269160 (OMIM: 601734) PREDICTED: SWI/SNF complex  (1213 aa)
 initn: 7312 init1: 3762 opt: 3964  Z-score: 1454.9  bits: 281.2 E(85289): 2.7e-74
Smith-Waterman score: 7176; 94.4% identity (95.3% similar) in 1149 aa overlap (1-1149:1-1113)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
       ::::::::::                               :::::::::::::::::::
XP_005 LVPLQPKTPQ-------------------------------TSASQQMLNFPDKGKEKPT
              550                                      560         

              610       620       630       640       650       660
pF1KB4 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
     570       580       590       600       610       620         

              670       680       690       700       710       720
pF1KB4 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
     630       640       650       660       670       680         

              730       740       750       760       770       780
pF1KB4 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
     690       700       710       720       730       740         

              790       800       810       820       830       840
pF1KB4 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
     750       760       770       780       790       800         

              850       860       870       880       890       900
pF1KB4 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
     810       820       830       840       850       860         

              910       920       930       940       950       960
pF1KB4 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
     870       880       890       900       910       920         

              970       980       990      1000      1010      1020
pF1KB4 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
     930       940       950       960       970       980         

             1030      1040      1050      1060      1070      1080
pF1KB4 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
     990      1000      1010      1020      1030      1040         

             1090      1100      1110      1120      1130      1140
pF1KB4 FPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS
       ::::::::::::::::::::::::...:  ..   :  .:   : : : . .:    : :
XP_005 FPNQQTPPSMMPGAVPGSGHPGVAGNAP--LGLPFG--MPPPPPPPAP-SIIPFGSLADS
    1050      1060      1070        1080        1090       1100    

             1150                                                  
pF1KB4 PGTVTPVPPPQ                                                 
        .   :.::                                                   
XP_005 ISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGS
         1110      1120      1130      1140      1150      1160    

>>XP_016875375 (OMIM: 601734) PREDICTED: SWI/SNF complex  (1099 aa)
 initn: 4035 init1: 3755 opt: 3933  Z-score: 1444.3  bits: 279.1 E(85289): 1e-73
Smith-Waterman score: 7276; 95.4% identity (95.4% similar) in 1151 aa overlap (1-1151:1-1099)

               10        20        30        40        50        60
pF1KB4 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQMLNFPDKGKEKPT
       ::::::::::                               :::::::::::::::::::
XP_016 LVPLQPKTPQQ------------------------------TSASQQMLNFPDKGKEKPT
              550                                     560       570

              610       620       630       640       650       660
pF1KB4 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
              580       590       600       610       620       630

              670       680       690       700       710       720
pF1KB4 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS
              640       650       660       670       680       690

              730       740       750       760       770       780
pF1KB4 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER
              700       710       720       730       740       750

              790       800       810       820       830       840
pF1KB4 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKES
              760       770       780       790       800       810

              850       860       870       880       890       900
pF1KB4 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAA
              820       830       840       850       860       870

              910       920       930       940       950       960
pF1KB4 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
              880       890       900       910       920       930

              970       980       990      1000      1010      1020
pF1KB4 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAP
              940       950       960       970       980       990

             1030      1040      1050      1060      1070      1080
pF1KB4 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
             1000      1010      1020      1030      1040      1050

             1090      1100      1110      1120      1130      1140
pF1KB4 FPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS
       ::::::::::::::::::::::::                      ::::::::::::::
XP_016 FPNQQTPPSMMPGAVPGSGHPGVA----------------------DPGTPLPPDPTAPS
             1060      1070                            1080        

             1150 
pF1KB4 PGTVTPVPPPQ
       :::::::::::
XP_016 PGTVTPVPPPQ
     1090         




1151 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 21:31:06 2016 done: Thu Nov  3 21:31:08 2016
 Total Scan time: 12.680 Total Display time:  0.420

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com