Result of FASTA (omim) for pF1KB3988
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3988, 173 aa
  1>>>pF1KB3988 173 - 173 aa - 173 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5843+/-0.000371; mu= 10.3037+/- 0.023
 mean_var=84.9976+/-17.434, 0's: 0 Z-trim(115.1): 251  B-trim: 283 in 1/49
 Lambda= 0.139114
 statistics sampled from 24943 (25281) to 24943 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.296), width:  16
 Scan time:  5.390

The best scores are:                                      opt bits E(85289)
NP_003454 (OMIM: 601585) protein tyrosine phosphat ( 173) 1181 246.6 1.5e-65
XP_016866760 (OMIM: 601585) PREDICTED: protein tyr ( 173) 1181 246.6 1.5e-65
XP_011534414 (OMIM: 601585) PREDICTED: protein tyr ( 173) 1181 246.6 1.5e-65
XP_016866759 (OMIM: 601585) PREDICTED: protein tyr ( 173) 1181 246.6 1.5e-65
XP_011534413 (OMIM: 601585) PREDICTED: protein tyr ( 173) 1181 246.6 1.5e-65
NP_536316 (OMIM: 601584) protein tyrosine phosphat ( 167) 1044 219.1 2.7e-57
XP_011515107 (OMIM: 606449) PREDICTED: protein tyr ( 173)  962 202.7 2.5e-52
NP_116000 (OMIM: 606449) protein tyrosine phosphat ( 173)  962 202.7 2.5e-52
XP_005250821 (OMIM: 606449) PREDICTED: protein tyr ( 173)  962 202.7 2.5e-52
XP_011515105 (OMIM: 606449) PREDICTED: protein tyr ( 173)  962 202.7 2.5e-52
XP_016866761 (OMIM: 601585) PREDICTED: protein tyr ( 135)  912 192.6 2.1e-49
XP_006716563 (OMIM: 606449) PREDICTED: protein tyr ( 149)  764 162.9   2e-40
XP_005271289 (OMIM: 601584) PREDICTED: protein tyr ( 136)  683 146.6 1.5e-35
NP_001182030 (OMIM: 601584) protein tyrosine phosp ( 136)  683 146.6 1.5e-35
XP_016857890 (OMIM: 601584) PREDICTED: protein tyr ( 136)  683 146.6 1.5e-35
XP_005271288 (OMIM: 601584) PREDICTED: protein tyr ( 142)  674 144.8 5.3e-35
NP_001182029 (OMIM: 601584) protein tyrosine phosp ( 142)  674 144.8 5.3e-35
XP_016868487 (OMIM: 606449) PREDICTED: protein tyr ( 148)  616 133.2 1.8e-31
NP_009010 (OMIM: 606449) protein tyrosine phosphat ( 148)  616 133.2 1.8e-31
XP_016868488 (OMIM: 606449) PREDICTED: protein tyr ( 124)  418 93.4 1.4e-19
XP_016870738 (OMIM: 603505) PREDICTED: dual specif ( 296)  188 47.5 2.2e-05
XP_011517461 (OMIM: 603505) PREDICTED: dual specif ( 331)  188 47.6 2.4e-05
XP_016870737 (OMIM: 603505) PREDICTED: dual specif ( 390)  188 47.6 2.7e-05
XP_016870736 (OMIM: 603505) PREDICTED: dual specif ( 422)  188 47.6 2.9e-05
XP_016870735 (OMIM: 603505) PREDICTED: dual specif ( 448)  188 47.7   3e-05
XP_005252345 (OMIM: 603505) PREDICTED: dual specif ( 448)  188 47.7   3e-05
NP_003662 (OMIM: 603505) dual specificity protein  ( 459)  188 47.7   3e-05
NP_001070649 (OMIM: 603505) dual specificity prote ( 461)  188 47.7 3.1e-05
XP_011517460 (OMIM: 603505) PREDICTED: dual specif ( 471)  188 47.7 3.1e-05
XP_016870734 (OMIM: 603505) PREDICTED: dual specif ( 479)  188 47.7 3.2e-05
XP_016870733 (OMIM: 603505) PREDICTED: dual specif ( 483)  188 47.7 3.2e-05
XP_016870732 (OMIM: 603505) PREDICTED: dual specif ( 485)  188 47.7 3.2e-05
NP_201588 (OMIM: 603505) dual specificity protein  ( 498)  188 47.7 3.2e-05
XP_011517458 (OMIM: 603505) PREDICTED: dual specif ( 514)  188 47.7 3.3e-05
XP_016870731 (OMIM: 603505) PREDICTED: dual specif ( 520)  188 47.7 3.4e-05
XP_016870730 (OMIM: 603505) PREDICTED: dual specif ( 544)  188 47.7 3.5e-05
XP_011517455 (OMIM: 603505) PREDICTED: dual specif ( 552)  188 47.7 3.5e-05
XP_011517454 (OMIM: 603505) PREDICTED: dual specif ( 564)  188 47.7 3.6e-05
XP_011517453 (OMIM: 603505) PREDICTED: dual specif ( 578)  188 47.7 3.6e-05
XP_011517452 (OMIM: 603505) PREDICTED: dual specif ( 578)  188 47.7 3.6e-05
XP_011517451 (OMIM: 603505) PREDICTED: dual specif ( 585)  188 47.7 3.7e-05
XP_011517450 (OMIM: 603505) PREDICTED: dual specif ( 591)  188 47.7 3.7e-05
XP_011517449 (OMIM: 603505) PREDICTED: dual specif ( 603)  188 47.7 3.8e-05
XP_016870729 (OMIM: 603505) PREDICTED: dual specif ( 613)  188 47.8 3.8e-05
NP_201570 (OMIM: 603504,616958) dual specificity p ( 383)  179 45.8 9.3e-05
XP_011540648 (OMIM: 603504,616958) PREDICTED: dual ( 392)  179 45.8 9.4e-05
XP_016858136 (OMIM: 603504,616958) PREDICTED: dual ( 489)  179 45.9 0.00011
XP_016858135 (OMIM: 603504,616958) PREDICTED: dual ( 490)  179 45.9 0.00011
XP_011540647 (OMIM: 603504,616958) PREDICTED: dual ( 495)  179 45.9 0.00011
NP_001306140 (OMIM: 603504,616958) dual specificit ( 565)  179 45.9 0.00013


>>NP_003454 (OMIM: 601585) protein tyrosine phosphatase   (173 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1298.1  bits: 246.6 E(85289): 1.5e-65
Smith-Waterman score: 1181; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
              130       140       150       160       170   

>>XP_016866760 (OMIM: 601585) PREDICTED: protein tyrosin  (173 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1298.1  bits: 246.6 E(85289): 1.5e-65
Smith-Waterman score: 1181; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
              130       140       150       160       170   

>>XP_011534414 (OMIM: 601585) PREDICTED: protein tyrosin  (173 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1298.1  bits: 246.6 E(85289): 1.5e-65
Smith-Waterman score: 1181; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
              130       140       150       160       170   

>>XP_016866759 (OMIM: 601585) PREDICTED: protein tyrosin  (173 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1298.1  bits: 246.6 E(85289): 1.5e-65
Smith-Waterman score: 1181; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
              130       140       150       160       170   

>>XP_011534413 (OMIM: 601585) PREDICTED: protein tyrosin  (173 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1298.1  bits: 246.6 E(85289): 1.5e-65
Smith-Waterman score: 1181; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
              130       140       150       160       170   

>>NP_536316 (OMIM: 601584) protein tyrosine phosphatase   (167 aa)
 initn: 1046 init1: 1023 opt: 1044  Z-score: 1149.7  bits: 219.1 E(85289): 2.7e-57
Smith-Waterman score: 1044; 87.6% identity (94.7% similar) in 170 aa overlap (4-173:1-167)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
          ::::::::..:.:::::::::::::::::: ::::::::::.::::.:::: . :::
NP_536    MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEK
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       :::::::::::::::: ::::::::.:.: :::::::::.::::::::::::::::::::
NP_536 EGIHVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCVAGLGRAPVLVALALI
        60        70        80        90       100       110       

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       : ::::::::::::::::::::::::::::::::::::::.:.:::   ::.:
NP_536 ECGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFRDTNGH---CCVQ
       120       130       140       150       160          

>>XP_011515107 (OMIM: 606449) PREDICTED: protein tyrosin  (173 aa)
 initn: 962 init1: 962 opt: 962  Z-score: 1060.5  bits: 202.7 E(85289): 2.5e-52
Smith-Waterman score: 962; 79.1% identity (92.4% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::.::.::::::::::::::. :::.:::::.::.:::::.::: : .::
XP_011 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       .:: :.:::::::::: ...:.::::::: :: : :: :.::::::::::::::::::::
XP_011 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :.:::::::.::::::::::.::::: ::::::::.:::::: . :.. ::. 
XP_011 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM
              130       140       150       160       170   

>>NP_116000 (OMIM: 606449) protein tyrosine phosphatase   (173 aa)
 initn: 962 init1: 962 opt: 962  Z-score: 1060.5  bits: 202.7 E(85289): 2.5e-52
Smith-Waterman score: 962; 79.1% identity (92.4% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::.::.::::::::::::::. :::.:::::.::.:::::.::: : .::
NP_116 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       .:: :.:::::::::: ...:.::::::: :: : :: :.::::::::::::::::::::
NP_116 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :.:::::::.::::::::::.::::: ::::::::.:::::: . :.. ::. 
NP_116 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM
              130       140       150       160       170   

>>XP_005250821 (OMIM: 606449) PREDICTED: protein tyrosin  (173 aa)
 initn: 962 init1: 962 opt: 962  Z-score: 1060.5  bits: 202.7 E(85289): 2.5e-52
Smith-Waterman score: 962; 79.1% identity (92.4% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::.::.::::::::::::::. :::.:::::.::.:::::.::: : .::
XP_005 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       .:: :.:::::::::: ...:.::::::: :: : :: :.::::::::::::::::::::
XP_005 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :.:::::::.::::::::::.::::: ::::::::.:::::: . :.. ::. 
XP_005 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM
              130       140       150       160       170   

>>XP_011515105 (OMIM: 606449) PREDICTED: protein tyrosin  (173 aa)
 initn: 962 init1: 962 opt: 962  Z-score: 1060.5  bits: 202.7 E(85289): 2.5e-52
Smith-Waterman score: 962; 79.1% identity (92.4% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KB3 MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
       ::::::::::::.::.::::::::::::::. :::.:::::.::.:::::.::: : .::
XP_011 MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATTVVRVCEVTYDKTPLEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
       .:: :.:::::::::: ...:.::::::: :: : :: :.::::::::::::::::::::
XP_011 DGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KB3 EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
       :.:::::::.::::::::::.::::: ::::::::.:::::: . :.. ::. 
XP_011 ESGMKYEDAIQFIRQKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM
              130       140       150       160       170   




173 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 21:20:15 2016 done: Thu Nov  3 21:20:16 2016
 Total Scan time:  5.390 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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