GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:50:58

Sequence gi568815597r:204517854_204719992 : 202139 bp : 47.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1990   1985    6                               1.05
 1.02 Term -  11312  10992  321  2  0   46   46   327 0.991  19.12
 1.01 Init -  11734  11570  165  1  0   68   49   150 0.346   7.12
 1.00 Prom -  14135  14096   40                              -7.36

 2.00 Prom +  14862  14901   40                              -5.96
 2.01 Init +  19456  19463    8  0  2  119   12     0 0.124  -4.15
 2.02 Intr +  20356  20455  100  1  1  102   95    29 0.636   5.11
 2.03 Intr +  26682  26816  135  2  0   82  106   103 0.680  12.26
 2.04 Intr +  28944  29024   81  2  0  100   64   119 0.866  10.53
 2.05 Intr +  31260  31674  415  2  1  103   36    98 0.132  -0.22
 2.06 Intr +  42891  42992  102  1  0   17   77    99 0.065   1.85
 2.07 Intr +  45653  45762  110  0  2   63  106    55 0.258   4.80
 2.08 Intr +  55779  55890  112  2  1   96  109   -16 0.452   1.25
 2.09 Intr +  56952  57034   83  1  2  102   64    36 0.247   1.96
 2.10 Intr +  67577  67730  154  1  1  103   67   131 0.847  12.15
 2.11 Term +  69743  69771   29  0  2   89   42    14 0.141  -4.86
 2.12 PlyA +  74051  74056    6                               1.05

 3.05 PlyA -  75255  75250    6                               1.05
 3.04 Term -  75707  75494  214  1  1   89   41   111 0.112   3.20
 3.03 Intr -  83579  83389  191  2  2   36   94    77 0.106   1.48
 3.02 Intr -  87920  87772  149  0  2   73  106    21 0.071   2.35
 3.01 Init - 102139 100168 1972  1  1   96   37  2451 0.252 226.33
 3.00 Prom - 110677 110638   40                              -2.66

 4.00 Prom + 113434 113473   40                              -7.26
 4.01 Init + 113797 113812   16  0  1   73   68    21 0.131  -0.99
 4.02 Term + 117913 118361  449  2  2   62   44   206 0.630   8.98
 4.03 PlyA + 118916 118921    6                               1.05

 5.00 Prom + 123621 123660   40                              -7.06
 5.01 Init + 131685 131775   91  2  1   70   78    40 0.307   1.85
 5.02 Intr + 134500 134530   31  2  1   92  110     4 0.348   0.19
 5.03 Term + 136757 136919  163  2  1   23   54   182 0.841   5.71
 5.04 PlyA + 139112 139117    6                               1.05

 6.00 Prom + 139478 139517   40                              -4.16
 6.01 Init + 141563 141611   49  1  1   64   98    39 0.525   3.61
 6.02 Term + 146455 146579  125  2  2  113   43    59 0.278   2.45
 6.03 PlyA + 148287 148292    6                               1.05

 7.00 Prom + 148442 148481   40                              -5.46
 7.01 Init + 156561 156613   53  2  2   89   89    93 0.500   9.13
 7.02 Intr + 156843 156983  141  0  0   88   55    40 0.187   0.17
 7.03 Intr + 166657 166784  128  1  2   78   52    31 0.030  -1.18
 7.04 Intr + 167311 167441  131  2  2   56   76    83 0.057   4.31
 7.05 Intr + 171864 172007  144  2  0   69   98    22 0.075   1.78
 7.06 Term + 174853 174879   27  0  0  117   47    15 0.059  -1.63
 7.07 PlyA + 177118 177123    6                               1.05

 8.03 PlyA - 177261 177256    6                               1.05
 8.02 Term - 181210 181066  145  0  1   79   44   126 0.701   4.68
 8.01 Init - 186369 186287   83  0  2   69   67    89 0.780   5.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_1|161_aa
MAACYPLVVAMGVLPLEGLMDHQLVEGPMDTSILGCSPLELQEDQMMVQLQGAPMPCGNS
SSSGSSSSSSYDWDNSGSISYTELQQALSQMGYNLSPQFTQLLVSSYCPRSVNPARQLDC
FIQVCTQLQMPTEAFREKDTAVQGNIRLSFKDVVTMTARML

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_1|486_bp
atggcagcgtgctaccccctggtggtggctatgggggtcctgcccctggagggccttatg
gaccaccagctggtagagggccctatggacacctcaatcctgggatgttcccctctggaa
ctccaggaggaccaaatgatggtacagctccagggggcccctatgccctgtggaaattca
tccagcagtggaagcagctcttccagcagttatgactgggacaactcaggctccattagc
tacacagagctgcagcaagctctgtcccaaatgggctacaacctgagcccccagttcacc
cagctactggtctccagctactgcccacgctctgtcaatcctgccagacagcttgattgc
ttcatccaggtgtgcacccagctgcagatgccgacagaggccttccgggagaaggacaca
gctgtacaaggcaacattcggctcagcttcaaggacgtcgtcaccatgacagctcggatg
ctatga

>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_2|442_aa
MENKVQRKVPLPEKELQKTISPHCLPQSINAYILEKDVGTAIVSDTTDDLWFLNESVSEQ
LGVGIKVEAADTEQTSEEVGKVIEVGKNDDLEDSKSLSDDTDVEVTSEDEWQCTECKKFN
SPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKENEGNDVPDCRRTISAPVVRP
KDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTDTENMEDCQNL
LKPCSLCLNVILKVVESYKGLKQESDIISLAFLKDPSGCIGLGKDCTSCTTGSGLANGMQ
VEMNCAILSRGLGTIVWVIYLEMIVPRISPCALCTDSDQVLHVISLWNSNQGQTVSDSQI
LSTCRCSLGRTAQGDAALEQQQDVYGTRIPSICTRSHSHSHSQRYVPLPFTFIPATYTHT
CVGYLRRSSLSHLASFAKQFFI

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_2|1329_bp
atggagaacaaagtgcagaggaaagttccacttccagaaaaagaactacagaagacgata
tccccacactgcctacctcagagcataaatgcatacattctagagaaggatgtgggtact
gccattgtttcagatactacagatgacttgtggtttttgaatgagtcagtatcagagcag
ttaggtgttggaataaaagttgaagctgctgatactgaacaaacaagtgaagaagtaggg
aaagtgattgaagtgggaaaaaatgatgacctggaggactctaagtccttaagtgatgat
accgatgtagaggttacctctgaggatgagtggcagtgtactgaatgcaagaaatttaac
tctccaagcaagaggtactgttttcgttgttgggccttgaggaaggattggtattcagat
tgttcaaagttaacccattctctctccacgtctgatatcactgccatacctgaaaaggaa
aatgaaggaaatgatgtccctgattgtcgaagaaccatttcggctcctgtcgttagacct
aaagatgcgtatataaagaaagaaaactccaaactttttgatccctgcaactcagtggaa
ttcttggatttggctcacagttctgaaagccaagagaccatctcaagcatgggagaacag
ttagataacctttctgaacagagaacagatacagaaaacatggaggattgccagaatctc
ttgaagccatgtagcttatgtttgaatgttatcctgaaggtagtggagagctacaaaggt
cttaagcaggagagtgacatcatctcattggcatttttgaaagatccttctggctgcatt
ggccttggaaaagattgcacttcctgcaccactggcagcgggctggccaatgggatgcaa
gtggaaatgaactgtgctattctgagcagaggcttagggaccattgtgtgggtaatttac
ttagaaatgattgtccctagaatctctccatgtgctttgtgtacagatagtgaccaggtt
ctgcatgtgatttccctgtggaattccaaccaaggacagacagtgagtgatagccaaatc
ctctccacttgcagatgtagccttgggaggacagcacaaggggatgcagccctggagcag
cagcaggatgtgtacggcacccgcatcccctccatctgcacccgcagccacagccacagc
cacagccagcgctatgtcccgttgccattcacattcatacctgcaacgtacactcataca
tgtgtcggatatttgcgaagaagctccctttcccacctagcatcttttgcaaagcagttt
ttcatttga

>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_3|841_aa
MRLLVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFL
TAVPPALPAGTQTLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLL
SLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAI
DSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLE
SLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVS
IDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPN
LQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRLPVREVPFREMTDHC
LPLISPRSFPPSLQVASGESMVLHCRALAEPEPEIYWVTPAGLRLTPAHAGRRYRVYPEG
TLELRRVTAEEAGLYTCVAQNLVGADTKTVSVVVGRALLQPGRDEGQGLELRVQETHPYH
ILLSWVTPPNTVSTNLTWSSASSLRGQGATALARLPRGTHSYNITRLLQATEYWACLQVA
FADAHTQLACVWARTKEATSCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRKVGP
QRGKTGGRNRKADLPGYGTQSNTVFPPLSLPTIFIEKKQAKVNAKGKSTFTARNILCAVV
KSFNLTFRQRNRGPESLCDLPSARSRIQTRVYRIPEPKPSLPSSTNLSHGSLEWPAVQCT
LMFQHAQVHHLEPLPAASPDLALDNSSSPSGYSPDETVNHKSLVFILLSPGQRVRAFVPG
L

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_3|2526_bp
atgaggcttctcgtggccccactcttgctagcttgggtggctggtgccactgccgctgtg
cccgtggtaccctggcatgttccctgcccccctcagtgtgcctgccagatccggccctgg
tatacgccccgctcgtcctaccgcgaggctaccactgtggactgcaatgacctattcctg
acggcagtccccccggcactccccgcaggcacacagaccctgctcctgcagagcaacagc
attgtccgtgtggaccagagtgagctgggctacctggccaatctcacagagctggacctg
tcccagaacagcttttcggatgcccgagactgtgatttccatgccctgccccagctgctg
agcctgcacctagaggagaaccagctgacccggctggaggaccacagctttgcagggctg
gccagcctacaggaactctatctcaaccacaaccagctctaccgcatcgcccccagggcc
ttttctggcctcagcaacttgctgcggctgcacctcaactccaacctcctgagggccatt
gacagccgctggtttgaaatgctgcccaacttggagatactcatgattggcggcaacaag
gtagatgccatcctggacatgaacttccggcccctggccaacctgcgtagcctggtgcta
gcaggcatgaacctgcgggagatctccgactatgccctggaggggctgcaaagcctggag
agcctctccttctatgacaaccagctggcccgggtgcccaggcgggcactggaacaggtg
cccgggctcaagttcctagacctcaacaagaacccgctccagcgggtagggccgggggac
tttgccaacatgctgcaccttaaggagctgggactgaacaacatggaggagctggtctcc
atcgacaagtttgccctggtgaacctccccgagctgaccaagctggacatcaccaataac
ccacggctgtccttcatccacccccgcgccttccaccacctgccccagatggagaccctc
atgctcaacaacaacgctctcagtgccttgcaccagcagacggtggagtccctgcccaac
ctgcaggaggtaggtctccacggcaaccccatccgctgtgactgtgtcatccgctgggcc
aatgccacgggcacccgtgtccgcttcatcgagccgcaatccaccctgtgtgcggagcct
ccggacctccagcgcctcccggtccgtgaggtgcccttccgggagatgacggaccactgt
ttgcccctcatctccccacgaagcttccccccaagcctccaggtagccagtggagagagc
atggtgctgcattgccgggcactggccgaacccgaacccgagatctactgggtcactcca
gctgggcttcgactgacacctgcccatgcaggcaggaggtaccgggtgtaccccgagggg
accctggagctgcggagggtgacagcagaagaggcagggctatacacctgtgtggcccag
aacctggtgggggctgacactaagacggttagtgtggttgtgggccgtgctctcctccag
ccaggcagggacgaaggacaggggctggagctccgggtgcaggagacccacccctatcac
atcctgctatcttgggtcaccccacccaacacagtgtccaccaacctcacctggtccagt
gcctcctccctccggggccagggggccacagctctggcccgcctgcctcggggaacccac
agctacaacattacccgcctccttcaggccacggagtactgggcctgcctgcaagtggcc
tttgctgatgcccacacccagttggcttgtgtatgggccaggaccaaagaggccacttct
tgccacagagccttaggggaccgtcctgggctcattgccatcctggctctcgctgtcctt
ctcctggcagctgggctagcggcccaccttggcacaggccaacccaggaaggtgggaccc
cagagaggcaaaacaggtggcaggaataggaaggcagaccttcctgggtacgggacccaa
agcaacactgtgtttccacctctcagcctccccactatttttatagagaagaaacaggct
aaggtgaatgccaaggggaaaagtactttcactgcccgaaacatcctctgtgccgtggtc
aagagttttaacctcacatttagacaaagaaacagaggtccagaaagtttatgtgattta
cccagtgccaggtccaggattcaaaccagagtctatcgtattcccgagcccaagccctct
ctcccctctagcaccaacctctcccatggcagcttagaatggcctgcagtacagtgcaca
ctgatgtttcagcatgcccaggtccatcacctggagccccttcctgcggcatcgccagat
cttgctttggataactcctcctcccccagtggatacagtcctgatgaaactgtcaatcac
aagtccctggtcttcatcctgctctcccctggccaaagagtgagggcctttgtccctgga
ctgtga

>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_4|154_aa
MAEFDGRRFSGGLRILEGAAPCSSDNPKWKDQPSCRVTTNILPGRASLQGMSICWHIALT
GTGNSSSITRNINSLSQCHREIYLHHHYGQHTCSRPSLLMSPAPSLPYESPARCHDHTHL
IPSTSIVISSSHCHNPGHHSYPDHHQNMRMASLL

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_4|465_bp
atggctgaatttgatggtagaaggttctcaggtggtctcagaattttggaaggagctgca
ccttgcagcagtgacaatcccaaatggaaggaccaaccttcctgccgtgtaacaaccaac
attcttccaggacgagcatcgctgcagggaatgagcatctgttggcacatcgccctcaca
gggacaggcaacagcagcagcatcaccaggaatatcaactcattatcacaatgccatcgt
gagatttacctccaccatcactatggtcagcacacctgcagccggccatctctgttaatg
tcaccagccccatctttgccatatgaatcccctgctcgctgccatgaccacactcactta
ataccttccacgagcatcgtcatctcctccagccactgtcacaatcctggtcatcatagc
taccctgatcaccatcagaacatgcgtatggcctcattgctgtga

>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_5|94_aa
MPGIVQAREESSIQERRQTIKQAIRRNMKGPGHLPALFRVSICGYFHPSLDQKLFDSIQT
SKSSNFVLMQKWHLVVTSIIGINQCVLEPACPSP

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_5|285_bp
atgccaggcattgtgcaggcaagagaggaaagcagtatccaggaaagaagacagacaatt
aagcaagcaataagaagaaacatgaagggccctggtcacctcccagcgctgtttcgagtc
agcatatgtggctacttccatccttccctggaccagaagctctttgattccatccaaaca
tccaagtcatccaactttgtgctcatgcagaagtggcacttggtagttacatccatcatt
ggcattaaccagtgcgtgctggaaccagcttgccccagtccatga

>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_6|57_aa
MEPGLKCSSSEEEEGEAAPAPLHSPFLNLPLTVLPTCTPSSEQIALPDLLRPTEMVM

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_6|174_bp
atggagcccggcctgaagtgctccagctcagaggaggaggagggagaggctgccccggca
cctctgcacagtccttttctgaatctgcccctcaccgtgctccccacctgcacgccgtcc
tcagaacagattgccttgcctgacctcctgaggccgacggagatggtgatgtga

>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_7|207_aa
METNTGELAALGAGRWLRAVSPLRAGGCEKAHLVTSSRTKNTDRSEQPGLAADVWRKLRP
RKGLRWSSVPSPRGSSPAGQPEPAPPFASRTDGPPVAGQPILSPGSCGGAAVPGQEPGAL
RRLLRPLPPRTPRPRQRPRCPRFPGGGGAAQGAPRIHRHPWNTENRKGRETHVADGRAVW
NCRESSNLSWVIFLEKALQEEVNRKNY

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_7|624_bp
atggagaccaacaccggggagctggcagccctgggggccggccggtggctcagagctgtg
tctccactcagagcaggtggctgtgagaaagcccacctggtgaccagttccaggacaaag
aacacggacagatctgagcaacctgggctggctgcggatgtttggagaaagctgaggccc
aggaaggggctgagatggagctcagttccctcaccccgcggctcctcgccggctgggcag
ccagagcctgcgccaccctttgccagcaggacagacggcccacctgtggctggccagccc
atcctgtctcctgggtcctgcggcggagctgcggtgccggggcaggagccaggagccctg
aggcggctgctccggccgctcccgccgcgtacgcctcggccacgccagcgacctcggtgt
ccacgattccccggcggcggcggcgctgcccagggagctcccaggatccacagacaccct
tggaacacagaaaaccgcaaaggcagagagacacacgttgcagatggcagagctgtgtgg
aactgcagggagtcttcaaatttatcttgggttatattcctggaaaaggcactgcaggaa
gaagtgaatcgtaaaaactattga

>gi568815597r:204517854_204719992|GENSCAN_predicted_peptide_8|75_aa
MEHYRMDALDPMGSDPGSEAPAGPGAERGNPSEYKLSASKCQSIERQSGSQKAKDVFFLS
FSYPSTPPEELAHGK

>gi568815597r:204517854_204719992|GENSCAN_predicted_CDS_8|228_bp
atggagcactatcgaatggatgccttagaccccatgggctctgacccagggtccgaggca
cctgcggggcctggagcagaaaggggtaatccttcagagtataaactcagtgcttcaaaa
tgccagagcatcgaaagacaaagtggctcccagaaggccaaggacgtctttttcttgagc
ttctcctacccctcaacccctcctgaagaattggcccatgggaagtag