GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:29:06

Sequence gi568815589f:111797216_112032994 : 235779 bp : 42.17% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15421  15490   70  0  1   55   65    73 0.861   2.96
 1.02 Term +  15658  15731   74  2  2   95   38    94 0.542   2.19
 1.03 PlyA +  17048  17053    6                               1.05

 2.07 PlyA -  17818  17813    6                              -0.45
 2.06 Term -  19895  19705  191  0  2   72   54    91 0.514   0.73
 2.05 Intr -  22437  22348   90  1  0   61  101    61 0.245   3.75
 2.04 Intr -  33210  32871  340  0  1   64   80   105 0.893   1.42
 2.03 Intr -  34140  33965  176  1  2  109   92   161 0.913  17.34
 2.02 Intr -  49274  49139  136  2  1   54   83    87 0.006   4.02
 2.01 Init -  58800  58684  117  0  0   42   58   113 0.150   3.95
 2.00 Prom -  91746  91707   40                              -4.05

 3.04 PlyA -  94213  94208    6                               1.05
 3.03 Term -  99374  99216  159  2  0   90   43   193 0.999  11.96
 3.02 Intr - 100092  99916  177  0  0   61   66   137 0.685   7.99
 3.01 Init - 100751 100458  294  2  0   60   52   273 0.916  18.13
 3.00 Prom - 101997 101958   40                              -7.85

 4.00 Prom + 102967 103006   40                              -7.35
 4.01 Init + 112431 112440   10  2  1   62  100     4 0.204  -1.10
 4.02 Intr + 113934 114021   88  1  1   92   37    69 0.323   0.31
 4.03 Intr + 117390 117531  142  0  1   60  106    98 0.729   8.23
 4.04 Intr + 118456 118621  166  0  1   56   47    62 0.538  -2.49
 4.05 Intr + 125659 125736   78  2  0   47   97    62 0.505   1.60
 4.06 Intr + 127562 127663  102  0  0   89   78    47 0.815   3.03
 4.07 Intr + 129169 129281  113  2  2   78  109   123 0.918  12.58
 4.08 Intr + 132285 132463  179  2  2   80  111   146 0.766  13.90
 4.09 Intr + 134056 134142   87  1  0   80   99    20 0.411   0.47
 4.10 Intr + 140936 141186  251  2  2   84   26   145 0.052   4.06
 4.11 Intr + 144464 144495   32  0  2   94  116   -18 0.008  -1.47
 4.12 Intr + 164509 164580   72  0  0   34  115    80 0.874   3.98
 4.13 Term + 166875 167066  192  2  0  103   36   169 0.904   9.64
 4.14 PlyA + 167619 167624    6                               1.05

 5.08 PlyA - 170373 170368    6                               1.05
 5.07 Term - 185842 185520  323  2  2   41   49   186 0.069   4.00
 5.06 Intr - 186950 186850  101  1  2   72   77    23 0.045  -1.57
 5.05 Intr - 196391 196329   63  1  0  100   86    45 0.012   2.41
 5.04 Intr - 213801 213619  183  2  0   94   46   163 0.140  10.68
 5.03 Intr - 228951 228793  159  2  0   58   52   136 0.037   5.18
 5.02 Intr - 231734 231563  172  0  1   40  -14   133 0.296  -3.62
 5.01 Intr - 233950 233853   98  0  2   72   94    79 0.871   5.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  37771  37726   46  1  1   52   36   119 0.807   4.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:111797216_112032994|GENSCAN_predicted_peptide_1|47_aa
MQQTHSLNKMSPFEENVSNRKVRDVSQAHENHRQKKEGATLLTDVAT

>gi568815589f:111797216_112032994|GENSCAN_predicted_CDS_1|144_bp
atgcagcagactcactctttgaataagatgtcaccctttgaagaaaatgtcagcaacaga
aaagtcagagatgtgtctcaggcacatgagaatcatcgtcagaagaaagagggagccacc
cttttgacagacgttgcaacgtaa

>gi568815589f:111797216_112032994|GENSCAN_predicted_peptide_2|349_aa
MIPACDGIRGGSGKETSDSETQEPGRCNAHKKAKGPVCDLLKFCASLISSYSWSFWVPLA
DEVRVFSAFIDSTGQMVLVSVTGRDAGSRGLQAGLAANLILRFQPLAAKRYNHDFPEQES
PNPLSLPIKTVEPREIYRLIQEQWVSTLICKLPDLPIRELQSENTGLLPRTNSTSVEIRK
RCPVLWVLSLIAQRAEQVLGFCPDLPSPGISLHGRTCTTTRGINPFYSSFQELRGSSGIF
PSVTLMIAHRIPPTKSGTPKIQLHKYPCSGVGLEDDHQYDYVVVSDDQVPCYRQASLPNV
PSYQATPGELDDDFPALRGPLILSRIADVFPRLLLRTQLEVHKGEKLHP

>gi568815589f:111797216_112032994|GENSCAN_predicted_CDS_2|1050_bp
atgatacctgcttgtgatgggataagaggaggctcagggaaagaaacctctgacagcgag
acccaggaacctggaagatgcaacgctcataaaaaagccaagggtccagtgtgcgatctc
cttaaattctgtgcctcactcatctcatcctattcgtggtccttctgggttcccctggca
gatgaagttcgggtgttttctgccttcattgactctactggacaaatggtacttgtcagc
gtaacaggtagagatgcagggtccagggggctacaagcagggcttgctgccaacttgatt
ttgcgcttccagcctctggcagccaaaagatataaccatgacttcccagaacaagaaagt
cccaatcctcttagcttaccgatcaagacagtggagcccagagagatctacagacttatt
caagagcagtgggtttccactctgatttgtaaacttcctgaccttcccatcagagaatta
caatcagagaacacaggtctgcttcctagaacaaacagtacctctgtggaaataagaaaa
aggtgccctgtgctctgggtccttagcctcatagctcagcgagcagagcaggtgctaggt
ttctgccctgacttaccttctccaggcatctctttgcatggccgaacttgcacaaccaca
cgaggcatcaaccctttctattcctccttccaagaactcagaggaagcagtggaatcttt
ccatctgtcacacttatgattgcccacagaatcccaccaaccaaatcaggtaccccaaag
atccagcttcataaatacccatgttctggggttggtctagaagatgaccatcaatatgac
tatgtggttgtatcagatgatcaggtgccctgctatagacaggcttcactgccaaatgtg
ccatcataccaagcaacacctggggagcttgatgatgattttcctgctctgagaggcccc
ctaatcctcagcagaatagctgatgtgtttccccgtctccttcttaggactcagcttgaa
gttcataaaggagagaaactacatccatga

>gi568815589f:111797216_112032994|GENSCAN_predicted_peptide_3|209_aa
MKRCGRHGESTNLHKTIKRGTEKRKENHAEMYKLTGLKAIMPARRFGGHFSGWTGASHLS
KRIEPFQEEENPQRGVQIAVSSSQKSGHNHHPNRNVAQMIAMKCISHSTKKRTNPKTAIP
SKARSSSAIPRPAGPARPAAAANTDNAPAGGGQGGRPAESAAALGRAPSVSVAARDPVPG
WRLLSLRLALLFLGAPEKDTGSGQLPELV

>gi568815589f:111797216_112032994|GENSCAN_predicted_CDS_3|630_bp
atgaaaagatgtggccggcacggggagagtacaaatctacataaaacaataaaacgagga
actgaaaaaaggaaagaaaaccacgctgagatgtacaagctgacaggactcaaagctatc
atgccagctcggaggtttggtggacatttttcagggtggacaggtgcttcacacctatct
aagcgcatagagcccttccaggaagaagaaaatccacagagaggtgtccagatagctgtg
agcagctcccagaaaagtggacacaatcaccaccctaacagaaacgtggcccagatgata
gccatgaaatgcatcagccacagcaccaagaagaggacgaacccgaagacggccattccc
tccaaggccaggtccagcagcgccatcccccggcccgccggaccggcccggcccgctgcg
gccgccaacacggacaacgctcccgcaggaggaggacagggtgggcgcccggcggaaagc
gctgcagccctgggccgggctccctcggtgtcggtggcagctcgggaccctgtgcctggc
tggaggctgctctctctccgtctggccctgctgttcctgggtgccccagaaaaagacacg
ggttccgggcagctgccggagcttgtctag

>gi568815589f:111797216_112032994|GENSCAN_predicted_peptide_4|503_aa
MLSRSPDLPKALRTVVLSFLSQASLHLQVTSRCRLHLNKKATDKQPYSKLPGVSLLKPLK
GVDPNLINNLETFFELDYPKGSSNNQKEDDMRTTLLMVTGFHALISFLLAFIFLGSTNEK
NREDTDVIALMQHLLNHDDPAIDVCKKLLGKYPNVDARLFIGGKKVGINPKINNLMPGYE
VAKYDLIWICDSGIRVIPDTLTDMVNQMTEKVGLVHGLPYVADRQGFAATLEQVYFGTSH
PRYYISANVTGFKCVTGMSCLMRKDVLDQAGGLIAFAQYIAEDYFMAKAIADRGWRFAMS
TQVAMQNSGSYSISQFQSRMISDIFSTVRDKGVGLSKTEIAPDPESTHMTLMPRKQFKKG
SSQEASSSEWKKQKSDALGLAACEKDMKAMGTDIWKLQQRCISTQEPLHLGRCFLKPTFI
EHLLCLGTVPDTCRRCRVVAKLENLMLAVSAGLCFPSPHDGHPDTTFTNIWCAGDPEDLD
YGRKCFGCQDTPSGRGEDNASPL

>gi568815589f:111797216_112032994|GENSCAN_predicted_CDS_4|1512_bp
atgttgtccaggagtccagatttacccaaggctctcagaacagttgtcctgtcattctta
tctcaggcttctctccatctccaggtcaccagtagatgccgattacacctcaacaagaag
gcaactgacaaacagccttatagcaagctcccaggtgtctctcttctgaaaccactgaaa
ggggtagatcctaacttaatcaacaacctggaaacattctttgaattggattatcccaaa
ggtagctcaaataatcagaaggaagatgatatgcgcactacacttcttatggtgactggt
tttcatgctcttatttcttttcttttagcctttatttttctcggtagcaccaatgaaaag
aatagagaagacacagatgtgatagccttaatgcagcacttattaaatcatgatgatcca
gccattgatgtatgtaagaagcttcttggaaaatatccaaatgttgatgctagattgttt
ataggtggcaaaaaagttggcattaatcctaaaattaataatttaatgccaggatatgaa
gttgcaaagtatgatcttatatggatttgtgatagtggaataagagtaattccagatacg
cttactgacatggtgaatcaaatgacagaaaaagtaggcttggttcacgggctgccttac
gtagcagacagacagggctttgctgccaccttagagcaggtatattttggaacttcacat
ccaagatactatatctctgccaatgtaactggtttcaaatgtgtgacaggaatgtcttgt
ttaatgagaaaagatgtgttggatcaagcaggaggacttatagcttttgctcagtacatt
gccgaagattactttatggccaaagcgatagctgaccgaggttggaggtttgcaatgtcc
actcaagttgcaatgcaaaactctggctcatattcaatttctcagtttcaatccagaatg
atcagtgatatattttctacagtgagagacaaaggggtgggactttcaaagacagaaatt
gctcctgaccctgagagcacccatatgactctgatgccaaggaaacagtttaagaaaggc
agctcccaggaagccagttcatcagagtggaagaagcagaagtcagatgctttaggtttg
gctgcgtgtgaaaaagacatgaaagcgatgggcacagatatttggaaactgcaacaacga
tgcatttccacccaagaacctttgcatttaggaaggtgtttcctcaagccaacattcatt
gagcacctgctgtgtcttggcactgtaccagatacttgccgtagatgccgtgttgtggcg
aagctggagaacctaatgcttgctgtgtcagcaggtctgtgctttccgagtccacatgat
ggtcacccagataccactttcaccaacatatggtgtgctggagatccagaggaccttgac
tatggaagaaagtgctttggctgtcaagacacacccagtggcagaggagaagataatgct
tctcctctatag

>gi568815589f:111797216_112032994|GENSCAN_predicted_peptide_5|366_aa
XESEATNEEHENTGVESWVGIRQLTKIFTIKMAVTLEDPTKLGKGGEFPDTIDNEDGQAN
GRTSEGSDFRYARSVPWLHFTKTVPFCKGRNCVIKGLFNAPCDREVDFASRYCPNLIEND
DGGKTALSRAECLATPHSLVINNGSLDLLFRLAGPPKIFRHKLTFRYYDWFSSESWTISP
KLESFDGMSPPSESSLDSVAHITLWWRKGSNSLATSEELTYGLVVSLQGTPSLLCSKKWG
STNFQKKHSEVNPRRLIEVGSVLSREDAAVKKTDADMVPALQWVLTLALTQSWEPVDFCA
LKSSSHVGAEDSAYKSPHFRAKARIDSLSGCPAQPEAVQPGVDVLVLVEEGKPEVRAKGA
VSFVKE

>gi568815589f:111797216_112032994|GENSCAN_predicted_CDS_5|1101_bp
nnagaaagtgaagcaacaaatgaggaacatgagaacactggagtagaaagctgggtgggc
atcagacagctgaccaaaattttcactatcaaaatggcagtcacccttgaagacccaaca
aagctggggaaaggaggggaatttcccgataccattgacaatgaagatggacaagctaac
ggcagaacctcagaaggatctgacttcagatatgcacgcagcgtaccctggcttcatttc
acaaaaacagtacccttttgcaaagggaggaattgtgtcatcaagggattgttcaatgct
ccctgtgatcgtgaagtagactttgcctccagatactgccccaatctgatagaaaatgat
gatggaggaaaaactgcgctcagcagggcagaatgtcttgcaacaccacattccttagta
atcaataatggtagtcttgacctgctttttcgacttgcaggtccacctaagatttttcgg
cataaacttactttcagatattatgactggttttcctcagagtcttggacaatttctccc
aaattagaaagttttgatgggatgtctccaccctctgaatcttccctggattctgttgcc
cacatcacattatggtggagaaaggggtcaaacagccttgccacatctgaagagttgacc
tatggccttgttgtaagccttcagggcaccccaagtttgctgtgctctaagaaatgggga
agcacaaatttccagaaaaagcatagcgaagtcaacccgaggaggttgatagaggttggg
agtgtcctgagccgtgaggatgcagcagtgaaaaagacagatgcagacatggtccctgcc
ctccagtgggtcttgactcttgccttgacacaatcatgggagcctgtcgacttctgcgct
ctgaagtcctcatcccatgtaggagctgaagacagtgcctacaagagcccacattttagg
gcaaaggcaagaatagacagtctgagtggttgccctgcacagccagaagcagtgcagcca
ggggtggatgtgctagtcctggtagaggaggggaagccagaagtcagggccaaaggggca
gtgtcatttgttaaggagtga