GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:28:29

Sequence gi568815586r:74943108_75307983 : 364876 bp : 34.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     77     72    6                               1.05
 1.02 Term -  42205  41609  597  1  0  -25   41   260 0.735   3.54
 1.01 Init -  43135  43046   90  1  0   67   85   122 0.789  10.34
 1.00 Prom -  51418  51379   40                              -2.15

 2.03 PlyA -  51655  51650    6                               1.05
 2.02 Term -  60279  59183 1097  1  2   67   54   386 0.330  24.35
 2.01 Init -  66732  66567  166  0  1   35   98    79 0.198   3.44
 2.00 Prom -  69101  69062   40                              -4.95

 3.04 PlyA -  70763  70758    6                               1.05
 3.03 Term -  82441  82320  122  2  2   58   37   138 0.613   3.36
 3.02 Intr -  85682  85553  130  2  1   83   40    84 0.014   2.45
 3.01 Init -  92811  92719   93  0  0   68   97    40 0.011   3.33
 3.00 Prom -  98438  98399   40                              -3.75

 4.07 PlyA -  99754  99749    6                               1.05
 4.06 Term - 100134  99998  137  1  2   74   40    79 0.433  -1.10
 4.05 Intr - 105159 105046  114  1  0   31  102    60 0.517   1.20
 4.04 Intr - 108210 107283  928  0  1   95  110   409 0.958  33.66
 4.03 Intr - 147747 147538  210  0  0   66   68   142 0.067   8.19
 4.02 Intr - 164837 164722  116  0  2   52   98    21 0.138  -1.25
 4.01 Init - 165354 165321   34  0  1   70  115    30 0.222   3.99
 4.00 Prom - 175326 175287   40                              -4.55

 5.00 Prom + 176985 177024   40                              -6.75
 5.01 Init + 181389 181446   58  2  1   56  109    93 0.783   9.72
 5.02 Intr + 219852 219942   91  1  1   28   84   116 0.014   3.33
 5.03 Intr + 241425 241474   50  0  2  104   84     9 0.000  -0.49
 5.04 Term + 254602 254744  143  2  2   69   48   112 0.028   2.41
 5.05 PlyA + 255617 255622    6                               1.05

 6.05 PlyA - 255902 255897    6                               1.05
 6.04 Term - 257948 257869   80  0  2   56   48    75 0.025  -2.75
 6.03 Intr - 258113 258076   38  1  2  128   71    47 0.150   3.99
 6.02 Intr - 263747 263566  182  2  2   50   75    45 0.171  -2.86
 6.01 Init - 264876 264190  687  0  0   81   86   806 0.993  74.82
 6.00 Prom - 265689 265650   40                             -15.32

 7.04 PlyA - 265712 265707    6                              -3.64
 7.03 Term - 266450 266101  350  0  2   45   45   293 0.472  14.36
 7.02 Intr - 274930 274847   84  2  0   51   88    55 0.397   0.67
 7.01 Init - 275867 275735  133  2  1   78   47    96 0.523   4.85
 7.00 Prom - 275990 275951   40                              -3.65

 8.03 PlyA - 277152 277147    6                               1.05
 8.02 Term - 289303 288938  366  1  0   -3   44   277 0.036   7.82
 8.01 Init - 315854 315711  144  2  0   79   79   124 0.886  10.77
 8.00 Prom - 330528 330489   40                              -6.45

 9.08 PlyA - 331634 331629    6                               1.05
 9.07 Term - 335958 335783  176  1  2   62   34   136 0.337   2.54
 9.06 Intr - 339240 339144   97  0  1   57   91   -10 0.275  -5.14
 9.05 Intr - 341973 341854  120  0  0   72   88   107 0.981   8.87
 9.04 Intr - 346668 346514  155  1  2   78   95   101 0.998   8.67
 9.03 Intr - 348713 348637   77  1  2   52   95    53 0.724   0.64
 9.02 Intr - 350260 350142  119  1  2   79  108    37 0.654   3.14
 9.01 Init - 355334 355269   66  2  0   85   92    10 0.574   2.22
 9.00 Prom - 357024 356985   40                              -4.45

10.03 PlyA - 358326 358321    6                               1.05
10.02 Term - 362689 362415  275  2  2   49   46   206 0.253   7.15
10.01 Init - 362899 362773  127  1  1   71   53   215 0.246  14.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 240824 240740   85  2  1   46  105    87 0.907   7.23
S.002 Term - 249191 249111   81  2  0   61   42   140 0.918   3.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_1|228_aa
MAVAACIERQLPRCQLQCGGTGSTARSRELLNTHRDTLAVDKCYPLQVSSELFYCSIKLL
FALLTLHLSAFLIFPGHWTRTQDPPNGRAEHALCNTNRAETHPLLTMLWVTRRREELQSF
REPRSRSSPSQDCDTLFGALWFLVPSSFWVPLHSLVPSVEAACGMSGPAVASQGAGSCAG
DWSCPPHCSQQLCAVAGPDACLLTHPFQLHLPLAGIGSRLVESCDRRM

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_1|687_bp
atggcagtggcagcctgtatagagcggcagctgccacgatgccagctgcagtgtggaggc
acaggcagcactgcacgctccagggagctgctgaacactcatcgggacaccctggctgtg
gacaaatgctacccacttcaagtctcctctgagctgttctattgctcaataaagctcctc
ttcgccttgctaaccctccacttgtcagcattcctcatttttcctgggcactggacaaga
actcaggacccaccaaatggcagggctgaacatgccctttgtaacacaaacagggctgaa
acacaccccttgctcaccatgttgtgggtgacaagaaggagagaagagctgcagtccttc
agggagcccagatctaggagttccccaagccaggactgtgacaccctctttggggctctg
tggttcctggtgccttcaagcttctgggtgccactgcattccctagtgccatctgtggaa
gctgcttgtgggatgtctggtccagctgtagcctcgcaaggagctggctcttgtgctgga
gactggagctgcccaccccactgcagccagcagctatgtgcagtggccggacctgatgct
tgcttgctcacacatcccttccagctccacttgcccttggcaggcataggatccaggctg
gtagaatcctgtgacagaaggatgtaa

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_2|420_aa
MGESSWSRVEPEMIPRQAQIQGRAQPLLQVQWSCRCLVARAHTHPRETLGRKSIKVLEVL
ARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINV
QKSQALLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTREVKDLFKENYKPLPSEIKED
TNKWKNIPSSWVGRINIVKMAILPKVIYKFNAIPIKLPITSFTELEKTTLKIIWNQKRAH
ITKSILSQKNKARGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRKQPSEIMPHIYNYL
IFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIK
TLEENLGITIQDIGMGKDFMSKTPKAMATKAKIERWDLIKLKSFCTAKEITIRVNRQPTE

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_2|1263_bp
atgggagagagctcctggtcaagggtggagcctgaaatgattccccgtcaggcccaaatc
cagggacgtgcccaacctctattgcaagtacagtggtcctgccgctgccttgtagctcgt
gcacacacacatccacgagagactctgggtaggaaaagtattaaagtgttggaagttctg
gccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattatccctgtttgcagatgacatgattgtatatctagaaaaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcactcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacttaggaatccaacttacaagg
gaagtgaaggacctcttcaaggaaaactacaaaccactgcccagtgaaataaaagaggat
acaaacaaatggaagaacattccatcctcatgggtaggaagaatcaatatcgtgaaaatg
gccatactgcccaaggtaatttataaattcaatgccatccccatcaagctaccaataact
tccttcacagaattggaaaaaactactttaaagatcatatggaaccaaaaaagagcccac
atcaccaagtccatcctaagccaaaagaacaaagccagaggcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaaaacagccctcagaaataatgccgcatatctacaactatctg
atctttgacaaacctgagaaaaacaagcaatggggaaaggattcactatttaataaatgg
tgctgggaaaactggctggccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaattaattcaaggtggattaaagacttaaacgttagacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggatataggcatgggcaaggacttcatg
tctaaaacaccaaaagcaatggcaacaaaagccaaaattgagagatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaattaccatcagagtgaacaggcaacctacagaa
tga

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_3|114_aa
MAGNGALLETSVDLCCWQIRHSAMAIPRLTLIFHFTMVSLAIKGTSLNALHDVLPISIAV
RYHTGYWQDSGEMAAMTELVPKARNSHSSSPLVPPPPVASTSYWVLLRFVDKHT

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_3|345_bp
atggcaggaaatggtgccttattggagaccagtgttgatctctgctgctggcagattaga
cattcagcaatggccatacccaggctgaccttgatctttcattttaccatggtttctctg
gcaataaagggcactagtttaaatgctctacatgatgttcttcctatatcaatagctgtt
cgttatcacactgggtactggcaggattctggagagatggctgcaatgaccgagttagtt
cccaaagccagaaattcgcattcatcatctcccctggtgccccctccccctgtagcaagc
acaagttattgggtcctgttacgctttgtagataagcatacttaa

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_4|512_aa
MAGSSPNLAMQVFYNVNIEFESKLDVYAGFYLLLSESKSVWRAPNFHMHQASLRMQLDTW
RLESNDDDDDGNEDDDNDDINNNLLHALIIISKLFLTSNILSFTLYIEEVRVTKTWIYIQ
FIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTYVEGVC
VVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRV
VRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQ
PNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPV
PVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKD
NRLLEHNRSERLPIRRSSTRDKNRRGETCFLLTTGDYTCASDGGIRKGYEKSRSLNNIAG
LAGNALRLSPVTSPYNSPCPLRRSRSPIPSIL

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_4|1539_bp
atggcagggtcttctcctaatctggcaatgcaagtcttttataatgtgaatatagaattt
gaaagtaaattagatgtatatgcaggattctacttgctactttcagaaagtaagagtgtc
tggagagctccaaattttcatatgcatcaggcatctttgagaatgcagttagacacttgg
aggctagagtcaaatgatgatgatgatgatggtaatgaggatgatgataatgatgatatt
aacaacaatttgctacatgctttaattataatttctaaactattcctgacatcaaatatt
ctttccttcactctatatatcgaggaagtgagggtcacaaagacatggatttatattcag
tttattgcttttgcttctttattcttcatcctggtttcaattacaactttttgcctggaa
acacatgaagctttcaatattgttaaaaacaagacagaaccagtcatcaatggcacaagt
gttgttctacagtatgaaattgaaacggatcctgccttgacgtatgtagaaggagtgtgt
gtggtgtggtttacttttgaatttttagtccgtattgttttttcacccaataaacttgaa
ttcatcaaaaatctcttgaatatcattgactttgtggccatcctacctttctacttagag
gtgggactcagtgggctgtcatccaaagctgctaaagatgtgcttggcttcctcagggtg
gtaaggtttgtgaggatcctgagaattttcaagctcacccgccattttgtaggtctgagg
gtgcttggacatactcttcgagctagtactaatgaatttttgctgctgataattttcctg
gctctaggagttttgatatttgctaccatgatctactatgccgagagagtgggagctcaa
cctaacgacccttcagctagtgagcacacacagttcaaaaacattcccattgggttctgg
tgggctgtagtgaccatgactaccctgggttatggggatatgtacccccaaacatggtca
ggcatgctggtgggagccctgtgtgctctggctggagtgctgacaatagccatgccagtg
cctgtcattgtcaataattttggaatgtactactccttggcaatggcaaagcagaaactt
ccaaggaaaagaaagaagcacatccctcctgctcctcaggcaagctcacctactttttgc
aagacagaattaaatatggcctgcaatagtacacagagtgacacatgtctgggcaaagac
aatcgacttctggaacataacagatcagaaaggctccccatcagacgctctagtaccaga
gacaaaaacagaagaggggaaacatgtttcctactgacgacaggtgattacacgtgtgct
tctgatggagggatcaggaaaggatatgaaaaatcccgaagcttaaacaacatagcgggc
ttggcaggcaatgctctgaggctctctccagtaacatcaccctacaactctccttgtcct
ctgaggcgctctcgatctcccatcccatctatcttgtaa

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_5|113_aa
MGSGYPSQMYDSAEISHGTVAPTKQTYLVDRRSGSADPDLSLLVQTSLTIKERENFLEVI
NLIDRAVCLVKGECTNPDNNMLLYHPISVDKVEETQKTIVIKKPSVEVQSQVL

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_5|342_bp
atgggctctggatatccctcgcagatgtatgattctgcagaaataagccatggcacagtt
gcccccactaagcagacctatttggttgaccgtagaagtggatctgcagatccagatctg
tctctcctcgtgcagacaagcctgaccatcaaggaaagggagaacttcctggaagtcatt
aacttaattgacagagctgtttgtttagttaaaggagaatgtacaaatcctgacaacaac
atgctactttatcatccaatcagtgtggacaaagtagaggaaacacaaaagactatagtg
ataaagaaacccagcgttgaagtacaaagtcaagtactctga

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_6|328_aa
MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPPGDCLTTAGDKLQPSPPP
LSPPPRAPPLSPGPGGCFEGGAGNCSSRGGRASDHPGGGREFFFDRHPGVFAYVLNYYRT
GKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALDIFETPDLIGGDPG
DDEDLAAKRLGIEDAAGLGGPDGKSGRWRRLQPRMWALFEDPYSSRAARSRGSNWGLNLR
TEEGEMECIYVSGEVEGGKVCLEVYVVKRISRTLFGPVTFQGRRILGLFPCWVATAVVTI
ETGLRFSAGVYPTTCKGNRLDNLSRIFT

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_6|987_bp
atgggcaagatcgagaacaacgagagggtgatcctcaatgtcgggggcacccggcacgaa
acctaccgcagcaccctcaagaccctgcctggaacacgcctggcccttcttgcctcctcc
gagcccccaggcgactgcttgaccacggcgggcgacaagctgcagccgtcgccgcctcca
ctgtcgccgccgccgagagcgcccccgctgtcccccgggccaggcggctgcttcgagggc
ggcgcgggcaactgcagttcccgcggcggcagggccagcgaccatcccggtggcggccgc
gagttcttcttcgaccggcacccgggcgtcttcgcctatgtgctcaattactaccgcacc
ggcaagctgcactgccccgcagacgtgtgcgggccgctcttcgaggaggagctggccttc
tggggcatcgacgagaccgacgtggagccctgctgctggatgacctaccggcagcaccgc
gacgccgaggaggcgctggacatcttcgagacccccgacctcattggcggcgaccccggc
gacgacgaggacctggcggccaagaggctgggcatcgaggacgcggcggggctcgggggc
cccgacggcaaatctggccgctggaggaggctgcagccccgcatgtgggccctcttcgaa
gacccctactcgtccagagccgccaggagccgtggctccaattgggggttgaatctgagg
acagaggaaggggaaatggaatgtatctatgtgtctggggaggtggagggaggaaaggtt
tgcctggaggtttatgttgtgaagagaatctccagaacgttgtttgggcctgtcactttc
caagggagacgaatactaggattgtttccctgttgggtagctactgctgtggttaccata
gaaacaggtctaagattcagtgcaggtgtatatccaaccacctgcaagggtaaccgatta
gataatctcagtcgcattttcacttga

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_7|188_aa
MEYYAAIKKDEFMSFEGTWMQLETIILSRLSQGQKTKHCMLSLIGAIKGARAYAQYPVHG
VQLILEHQGSLGADLPAPGGVGQCRLDPPRAPWFAQPCAMVTLGAEVGDWQIRRSQNEGG
ERGRRPAGAFSPTPAPREAAQPPESGKRQQVVSRRRRAAHLGAKTQSRCPENLVHSETKA
EPLFSRSR

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_7|567_bp
atggaatactatgcagccataaagaaggatgagttcatgtcctttgaagggacatggatg
cagctggaaaccatcattctcagcagactatcacaaggacagaaaaccaaacactgcatg
ttgtcactcataggagcaataaagggtgctagagcatatgcacaatatccagtccacgga
gtacaacttattttagaacatcaaggaagccttggagccgatctgcccgctcccggaggg
gtcgggcagtgccggctggacccgccccgagctccatggtttgcccaaccctgcgcgatg
gtgactctgggcgcggaggttggcgactggcaaatccgcagatcacagaatgaaggcggg
gagcgcggccggcggccggcgggggctttctcccccaccccagcgcccagggaagcggct
caaccacctgaatccggaaaacgccaacaagtagtttctcgtcggagaagggcggctcac
ctgggcgccaagactcagtcccgctgcccagagaacctcgtccactcggaaaccaaagca
gaaccacttttctctcggtctcgttaa

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_8|169_aa
MGSYVKRTIRELELLETKNTVNKKKFASAPVGNGMAYSCQETSSMEEKLCTSLDSATTSF
GLSSNTRTICQETQEKPKAPGTSVQVMDPEVVHDPTLAPSSMVQEQSCLWNYLGDMTICD
LRGRTAGTGLTMDYEAALCLASDPSQLLSGSSPVHPGTQQETSGNSPTV

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_8|510_bp
atggggtcttatgtaaaaaggacaataagagaactagagcttttggaaactaaaaataca
gtgaacaagaagaagtttgcttcagcccctgttggcaatggcatggcctacagctgccag
gagaccagtagtatggaagagaagctatgtacctctttggattcagctacaacttcattt
ggccttagttctaacaccagaaccatctgccaagaaacacaggaaaagccaaaagcacct
gggacttcagttcaggttatggaccctgaagtagtgcatgatccaactctagccccttca
agcatggtccaggagcagtcttgcctgtggaattatttgggagacatgactatctgtgac
ctcagaggtagaactgctggcactggtttgaccatggattatgaagcagctttgtgtctt
gcctctgatccctcccagctgctatctgggagcagtcctgttcacccagggacccagcaa
gagacatctggtaacagtcccactgtctag

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_9|269_aa
MGCLQMKLYLRTLKSSSKLCHWGATLTFLSSDHLSLPESIKENTLLKLRITNIDQIALDS
LKTASMEQEDDIIIQETNDRLVFKAIQDVLKEKLHKRGVRILTGLGKYFQQLDKEGNGLL
DKADFKQALKVFHLEVSEKDFESAWLILNDNGNGKVDYGEFKRGIIGEMNEYRKSYVRKA
FMKLDFNKSGSVPIINIRKCYCAKKHSQVISGHSTEEEIKSSFLETLKVACSKSDEVSYG
EFEDYYEGLSIGIVDDEDFVNILRTPWGI

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_9|810_bp
atgggttgtctccagatgaagttgtatcttcgtactttgaaaagttcttcaaagctgtgt
cattggggtgcaaccttgacatttttgagttctgatcatctcagccttccagaaagcatc
aaagaaaacacattacttaaactccgaatcacaaatattgatcaaatagctttggattct
ctcaaaactgcttctatggaacaggaggatgatataatcattcaagaaaccaatgatagg
ctggtcttcaaagcaattcaagatgtgctaaaagaaaaactacataaaagaggtgttcgt
attttgactggattgggaaaatattttcaacagttggacaaggaaggaaatggactttta
gataaggcagattttaagcaagctctaaaagtgtttcacttagaagtgtctgaaaaggat
tttgagtctgcatggctaattctgaatgacaatggcaatggcaaggttgattatggagaa
ttcaaacgtggtattattggtgaaatgaatgaatacaggaaatcatatgttcgaaaggcc
tttatgaaactggatttcaacaaaagtggcagtgtgcctattataaacataagaaaatgt
tactgtgcaaagaagcattctcaagtaatttcaggccattcaacagaggaagaaatcaaa
tcatcctttctagaaacattaaaagttgcctgcagcaagtctgatgaagtgtcatatggt
gaatttgaagattactatgaaggtttaagtataggaatagtagatgatgaagactttgtt
aacatcttacgtactccatgggggatttag

>gi568815586r:74943108_75307983|GENSCAN_predicted_peptide_10|133_aa
MSRRPVRTLLLLRATLSMLLGLQRFHQRRLHGVEVGQPQVQPAADDILHHVWKPDDHLLL
VLDPHVPHELVVRLLQQLCRARLGSARGLVGAALLRGLLLSLPVARGLGQWSGLEEGSAA
LPGSRTEERLPEP

>gi568815586r:74943108_75307983|GENSCAN_predicted_CDS_10|402_bp
atgagcaggaggcctgtcaggaccctgctgttgctcagagccaccctgtccatgctcctc
gggctccagcgctttcaccagcgcagacttcatggtgtggaggttggacagcctcaggtg
cagcctgctgccgacgacatccttcaccatgtctggaaaccagatgatcatcttcttctg
gtccttgacccgcatgtaccacacgagctcgtcgtgcgccttctgcagcagctgtgccgg
gccagactgggcagtgctaggggcctggtgggcgccgcccttctccgcggcctgctgctg
agccttccggtcgctcggggcctggggcagtggtcgggtctggaggagggctctgcggct
ctgccagggtcgcggacggaggaacgcctaccggaaccctag