(Linear) (Six-base) MAPSORT of: KIAA0800.seq Check: 1043 from: 1 to: 4521 KIAA0800.orf With 182 enzymes: SgfI * July 18, 2007 13:35 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 3082 3298 3343 4521 Size: 3082 216 45 1178 Fragments arranged by size: 3082 1178 216 45 Acc65I G'GTAC_C Cuts at: 0 93 4521 Size: 93 4428 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 158 1105 1346 1612 1784 2029 3370 4521 Size: 158 947 241 266 172 245 1341 1151 Fragments arranged by size: 1341 1151 947 266 245 241 172 158 AflIII A'CryG_T Cuts at: 0 18 1934 4521 Size: 18 1916 2587 Fragments arranged by size: 2587 1916 18 AgeI A'CCGG_T Cuts at: 0 1231 4521 Size: 1231 3290 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1585 2224 4521 Size: 1585 639 2297 Fragments arranged by size: 2297 1585 639 AlwNI CAG_nnn'CTG Cuts at: 0 2348 2364 2671 4179 4296 4521 Size: 2348 16 307 1508 117 225 Fragments arranged by size: 2348 1508 307 225 117 16 ApaI G_GGCC'C Cuts at: 0 408 2268 4521 Size: 408 1860 2253 Fragments arranged by size: 2253 1860 408 ApaLI G'TGCA_C Cuts at: 0 1505 4521 Size: 1505 3016 ApoI r'AATT_y Cuts at: 0 501 1156 1168 1488 1717 2027 2101 4521 Size: 501 655 12 320 229 310 74 2420 Fragments arranged by size: 2420 655 501 320 310 229 74 12 AseI AT'TA_AT Cuts at: 0 3824 4521 Size: 3824 697 AvaI C'yCGr_G Cuts at: 0 407 4521 Size: 407 4114 BamHI G'GATC_C Cuts at: 0 156 4521 Size: 156 4365 BanI G'GyrC_C Cuts at: 0 93 937 1896 2758 2944 3218 3331 4521 Size: 93 844 959 862 186 274 113 1190 Fragments arranged by size: 1190 959 862 844 274 186 113 93 BanII G_rGCy'C Cuts at: 0 41 296 408 1427 2268 4521 Size: 41 255 112 1019 841 2253 Fragments arranged by size: 2253 1019 841 255 112 41 BbsI GAAGACnn'nnnn_ Cuts at: 0 537 1438 1837 4427 4521 Size: 537 901 399 2590 94 Fragments arranged by size: 2590 901 537 399 94 BbvCI CC'TCA_GC Cuts at: 0 1997 2792 4521 Size: 1997 795 1729 Fragments arranged by size: 1997 1729 795 BclI T'GATC_A Cuts at: 0 1466 3818 4521 Size: 1466 2352 703 Fragments arranged by size: 2352 1466 703 BfrBI ATG'CAT Cuts at: 0 271 1296 4521 Size: 271 1025 3225 Fragments arranged by size: 3225 1025 271 BglI GCCn_nnn'nGGC Cuts at: 0 412 4521 Size: 412 4109 BglII A'GATC_T Cuts at: 0 713 3651 4521 Size: 713 2938 870 Fragments arranged by size: 2938 870 713 BlpI GC'TnA_GC Cuts at: 0 35 4521 Size: 35 4486 Bme1580I G_kGCm'C Cuts at: 0 408 1509 2268 4521 Size: 408 1101 759 2253 Fragments arranged by size: 2253 1101 759 408 BmgBI CAC'GTC Cuts at: 0 1935 4521 Size: 1935 2586 BmrI ACTGGGnnnn_n' Cuts at: 0 581 1556 2511 2659 4521 Size: 581 975 955 148 1862 Fragments arranged by size: 1862 975 955 581 148 BmtI G_CTAG'C Cuts at: 0 1538 2821 4384 4521 Size: 1538 1283 1563 137 Fragments arranged by size: 1563 1538 1283 137 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 73 722 1897 3832 4318 4521 Size: 73 649 1175 1935 486 203 Fragments arranged by size: 1935 1175 649 486 203 73 Bpu10I CC'TnA_GC Cuts at: 0 1997 2792 3113 4521 Size: 1997 795 321 1408 Fragments arranged by size: 1997 1408 795 321 BsaI GGTCTCn'nnnn_ Cuts at: 0 677 4521 Size: 677 3844 BsaBI GATnn'nnATC Cuts at: 0 179 875 2053 2239 4521 Size: 179 696 1178 186 2282 Fragments arranged by size: 2282 1178 696 186 179 BsaHI Gr'CG_yC Cuts at: 0 3722 4521 Size: 3722 799 BsaWI w'CCGG_w Cuts at: 0 1231 4521 Size: 1231 3290 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 974 1004 4291 4321 4521 Size: 974 30 3287 30 200 Fragments arranged by size: 3287 974 200 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 646 2108 3089 3394 4216 4327 4390 4411 Size: 646 1462 981 305 822 111 63 21 Cuts at: 4411 4453 4521 Size: 42 68 Fragments arranged by size: 1462 981 822 646 305 111 68 63 42 21 BseYI C'CCAG_C Cuts at: 0 210 1737 2961 4521 Size: 210 1527 1224 1560 Fragments arranged by size: 1560 1527 1224 210 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 3321 3467 3728 4521 Size: 3321 146 261 793 Fragments arranged by size: 3321 793 261 146 BsiHKAI G_wGCw'C Cuts at: 0 41 1427 1509 2159 2213 4521 Size: 41 1386 82 650 54 2308 Fragments arranged by size: 2308 1386 650 82 54 41 BsmI GAATG_Cn' Cuts at: 0 261 273 1646 3298 3519 4521 Size: 261 12 1373 1652 221 1002 Fragments arranged by size: 1652 1373 1002 261 221 12 Bsp1286I G_dGCh'C Cuts at: 0 41 296 408 1427 1509 2159 2213 2268 Size: 41 255 112 1019 82 650 54 55 Cuts at: 2268 4521 Size: 2253 Fragments arranged by size: 2253 1019 650 255 112 82 55 54 41 BspHI T'CATG_A Cuts at: 0 251 1692 4521 Size: 251 1441 2829 Fragments arranged by size: 2829 1441 251 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1567 2633 3082 3298 3343 4521 Size: 1567 1066 449 216 45 1178 Fragments arranged by size: 1567 1178 1066 449 216 45 BsrBI CCG'CTC Cuts at: 0 3315 3740 3877 4521 Size: 3315 425 137 644 Fragments arranged by size: 3315 644 425 137 BsrDI GCAATG_nn' Cuts at: 0 476 2723 2907 3593 4521 Size: 476 2247 184 686 928 Fragments arranged by size: 2247 928 686 476 184 BsrFI r'CCGG_y Cuts at: 0 1231 4521 Size: 1231 3290 BsrGI T'GTAC_A Cuts at: 0 4072 4521 Size: 4072 449 BstBI TT'CG_AA Cuts at: 0 528 3846 4521 Size: 528 3318 675 Fragments arranged by size: 3318 675 528 BstXI CCAn_nnnn'nTGG Cuts at: 0 1605 3805 4521 Size: 1605 2200 716 Fragments arranged by size: 2200 1605 716 BstYI r'GATC_y Cuts at: 0 156 713 1951 2354 2525 3651 4521 Size: 156 557 1238 403 171 1126 870 Fragments arranged by size: 1238 1126 870 557 403 171 156 Bsu36I CC'TnA_GG Cuts at: 0 776 4521 Size: 776 3745 BtgI C'CryG_G Cuts at: 0 592 1277 2797 2940 4521 Size: 592 685 1520 143 1581 Fragments arranged by size: 1581 1520 685 592 143 BtsI GCAGTG_nn' Cuts at: 0 64 84 305 2157 2403 2669 4521 Size: 64 20 221 1852 246 266 1852 Fragments arranged by size: 1852 1852 266 246 221 64 20 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 1152 1187 4521 Size: 1152 35 3334 Fragments arranged by size: 3334 1152 35 DraI TTT'AAA Cuts at: 0 302 4521 Size: 302 4219 DrdI GACnn_nn'nnGTC Cuts at: 0 185 4521 Size: 185 4336 EaeI y'GGCC_r Cuts at: 0 1595 2165 4521 Size: 1595 570 2356 Fragments arranged by size: 2356 1595 570 EarI CTCTTCn'nnn_ Cuts at: 0 134 238 609 3962 4193 4208 4521 Size: 134 104 371 3353 231 15 313 Fragments arranged by size: 3353 371 313 231 134 104 15 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 3218 4318 4521 Size: 3218 1100 203 Fragments arranged by size: 3218 1100 203 EcoICRI GAG'CTC Cuts at: 0 39 1425 4521 Size: 39 1386 3096 Fragments arranged by size: 3096 1386 39 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 73 158 722 1105 1346 1612 1784 1897 Size: 73 85 564 383 241 266 172 113 Cuts at: 1897 2029 3370 3832 4318 4521 Size: 132 1341 462 486 203 Fragments arranged by size: 1341 564 486 462 383 266 241 203 172 132 113 85 73 EcoNI CCTnn'n_nnAGG Cuts at: 0 4393 4521 Size: 4393 128 EcoO109I rG'GnC_Cy Cuts at: 0 2265 3440 3840 4521 Size: 2265 1175 400 681 Fragments arranged by size: 2265 1175 681 400 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 2566 3540 4521 Size: 2566 974 981 Fragments arranged by size: 2566 981 974 FspI TGC'GCA Cuts at: 0 1178 1573 4521 Size: 1178 395 2948 Fragments arranged by size: 2948 1178 395 HaeII r_GCGC'y Cuts at: 0 3139 4521 Size: 3139 1382 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 974 1006 1936 1943 1968 1975 2875 2907 Size: 974 32 930 7 25 7 900 32 Cuts at: 2907 3724 3756 4408 4440 4521 Size: 817 32 652 32 81 Fragments arranged by size: 974 930 900 817 652 81 32 32 32 32 25 7 7 HincII GTy'rAC Cuts at: 0 3635 4521 Size: 3635 886 HindIII A'AGCT_T Cuts at: 0 695 4521 Size: 695 3826 KpnI G_GTAC'C Cuts at: 0 97 4521 Size: 97 4424 MfeI C'AATT_G Cuts at: 0 118 1824 2058 4521 Size: 118 1706 234 2463 Fragments arranged by size: 2463 1706 234 118 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1919 2216 2915 4289 4521 Size: 1919 297 699 1374 232 Fragments arranged by size: 1919 1374 699 297 232 MscI TGG'CCA Cuts at: 0 1597 2167 4521 Size: 1597 570 2354 Fragments arranged by size: 2354 1597 570 MslI CAynn'nnrTG Cuts at: 0 77 1039 2206 2233 3605 3803 4045 4521 Size: 77 962 1167 27 1372 198 242 476 Fragments arranged by size: 1372 1167 962 476 242 198 77 27 MspA1I CmG'CkG Cuts at: 0 510 1762 2348 2364 2979 3348 4521 Size: 510 1252 586 16 615 369 1173 Fragments arranged by size: 1252 1173 615 586 510 369 16 NcoI C'CATG_G Cuts at: 0 1277 2940 4521 Size: 1277 1663 1581 Fragments arranged by size: 1663 1581 1277 NdeI CA'TA_TG Cuts at: 0 273 4521 Size: 273 4248 NheI G'CTAG_C Cuts at: 0 1534 2817 4380 4521 Size: 1534 1283 1563 141 Fragments arranged by size: 1563 1534 1283 141 NsiI A_TGCA'T Cuts at: 0 273 1298 4521 Size: 273 1025 3223 Fragments arranged by size: 3223 1025 273 NspI r_CATG'y Cuts at: 0 22 885 1296 1682 3049 4521 Size: 22 863 411 386 1367 1472 Fragments arranged by size: 1472 1367 863 411 386 22 PasI CC'CwG_GG Cuts at: 0 926 2808 4521 Size: 926 1882 1713 Fragments arranged by size: 1882 1713 926 PciI A'CATG_T Cuts at: 0 18 4521 Size: 18 4503 PflMI CCAn_nnn'nTGG Cuts at: 0 2174 3187 4296 4521 Size: 2174 1013 1109 225 Fragments arranged by size: 2174 1109 1013 225 PfoI T'CCnGG_A Cuts at: 0 3257 4521 Size: 3257 1264 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1990 2022 4521 Size: 1990 32 2499 Fragments arranged by size: 2499 1990 32 PpuMI rG'GwC_Cy Cuts at: 0 3440 3840 4521 Size: 3440 400 681 Fragments arranged by size: 3440 681 400 PspOMI G'GGCC_C Cuts at: 0 404 2264 4521 Size: 404 1860 2257 Fragments arranged by size: 2257 1860 404 PstI C_TGCA'G Cuts at: 0 312 2387 2498 4521 Size: 312 2075 111 2023 Fragments arranged by size: 2075 2023 312 111 PvuII CAG'CTG Cuts at: 0 510 1762 2348 2364 2979 3348 4521 Size: 510 1252 586 16 615 369 1173 Fragments arranged by size: 1252 1173 615 586 510 369 16 SacI G_AGCT'C Cuts at: 0 41 1427 4521 Size: 41 1386 3094 Fragments arranged by size: 3094 1386 41 ScaI AGT'ACT Cuts at: 0 1473 4521 Size: 1473 3048 SfcI C'TryA_G Cuts at: 0 5 308 489 544 550 665 1955 1967 Size: 5 303 181 55 6 115 1290 12 Cuts at: 1967 2383 2494 2949 3695 4031 4521 Size: 416 111 455 746 336 490 Fragments arranged by size: 1290 746 490 455 416 336 303 181 115 111 55 12 6 5 SfiI GGCCn_nnn'nGGCC Cuts at: 0 412 4521 Size: 412 4109 SpeI A'CTAG_T Cuts at: 0 745 4521 Size: 745 3776 SphI G_CATG'C Cuts at: 0 1296 1682 4521 Size: 1296 386 2839 Fragments arranged by size: 2839 1296 386 SspI AAT'ATT Cuts at: 0 997 1529 4521 Size: 997 532 2992 Fragments arranged by size: 2992 997 532 StyI C'CwwG_G Cuts at: 0 1277 2940 4521 Size: 1277 1663 1581 Fragments arranged by size: 1663 1581 1277 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 918 1673 2746 4521 Size: 918 755 1073 1775 Fragments arranged by size: 1775 1073 918 755 TatI w'GTAC_w Cuts at: 0 1188 1471 4072 4521 Size: 1188 283 2601 449 Fragments arranged by size: 2601 1188 449 283 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1626 1658 3675 3707 3737 3769 3800 3832 Size: 1626 32 2017 32 30 32 31 32 Cuts at: 3832 4521 Size: 689 Fragments arranged by size: 2017 1626 689 32 32 32 32 31 30 Tth111I GACn'n_nGTC Cuts at: 0 2404 4521 Size: 2404 2117 XbaI T'CTAG_A Cuts at: 0 4392 4521 Size: 4392 129 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 849 4521 Size: 849 3672 XmnI GAAnn'nnTTC Cuts at: 0 394 4521 Size: 394 4127 Enzymes that do cut: AarI Acc65I AcuI AflIII AgeI AlfI AlwNI ApaI ApaLI ApoI AseI AvaI BamHI BanI BanII BbsI BbvCI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BpmI Bpu10I BsaI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiHKAI BsmI Bsp1286I BspHI BspMI BsrBI BsrDI BsrFI BsrGI BstBI BstXI BstYI Bsu36I BtgI BtsI CspCI DraI DrdI EaeI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I FalI FspI HaeII Hin4I HincII HindIII KpnI MfeI MmeI MscI MslI MspA1I NcoI NdeI NheI NsiI NspI PasI PciI PflMI PfoI PpiI PpuMI PspOMI PstI PvuII SacI ScaI SfcI SfiI SpeI SphI SspI StyI TaqII TatI TstI Tth111I XbaI XcmI XmnI Enzymes that do not cut: AatII AccI AclI AfeI AflII AhdI AleI AloI AscI AsiSI AvrII BaeI BbeI BcgI BciVI BplI BpuEI BsaAI BsiEI BsiWI BsmBI BspEI BssHII BssSI BstAPI BstEII BstZ17I BtgZI ClaI DraIII EagI EcoRI EcoRV FseI FspAI HpaI KasI MluI NaeI NarI NgoMIV NotI NruI PacI PmeI PmlI PshAI PsiI PspXI PsrI PvuI RsrII SacII SalI SanDI SapI SbfI SexAI SfoI SgfI SgrAI SmaI SmlI SnaBI SrfI StuI SwaI XhoI XmaI ZraI