GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:29:40

Sequence gi568815581f_30632048 : 261739 bp : 44.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.19 PlyA - 1207052 1207047    6                               1.05
 1.18 Term - 1220261 1220092  170  0  2   83   48   194 0.999  12.94
 1.17 Intr - 1220983 1220765  219  2  0   70   78   199 0.914  15.37
 1.16 Intr - 1226464 1226433   32  0  2   86   97    45 0.753   2.97
 1.15 Intr - 1227251 1226767  485  2  2   73   51   118 0.050  -1.58
 1.14 Intr - 1236065 1235999   67  1  1   90  108    34 0.855   4.51
 1.13 Intr - 1241440 1241331  110  1  2   72   73    82 0.948   4.18
 1.12 Intr - 1243366 1243187  180  1  0   62   82   123 0.660   9.16
 1.11 Intr - 1246280 1246203   78  2  0   89   91    39 0.511   4.05
 1.10 Intr - 1248707 1248506  202  1  1   57   46    73 0.176  -0.71
 1.09 Intr - 1252458 1252377   82  1  1   82   80    71 0.429   4.40
 1.08 Intr - 1254014 1253933   82  2  1   38  100    61 0.931   1.51
 1.07 Intr - 1255258 1255189   70  0  1   12   79   111 0.382   1.78
 1.06 Intr - 1257356 1257238  119  2  2   75   81    84 0.382   5.66
 1.05 Intr - 1260747 1260700   48  0  0   91   92    12 0.613   0.78
 1.04 Intr - 1262690 1262598   93  2  0   96   87    51 0.965   5.96
 1.03 Intr - 1262964 1262923   42  0  0   75   98    35 0.756   1.64
 1.02 Intr - 1267683 1267599   85  2  1   66  108    59 0.998   5.52
 1.01 Init - 1269580 1269489   92  1  2   59   41   136 0.975   5.96
 1.00 Prom - 1272939 1272900   40                              -3.06

 2.00 Prom + 1276727 1276766   40                              -5.06
 2.01 Init + 1305200 1305473  274  1  1  105   70   248 0.160  19.87
 2.02 Intr + 1344474 1344567   94  1  1   30   95    50 0.031  -1.08
 2.03 Intr + 1350952 1351057  106  1  1   83   86    48 0.159   4.32
 2.04 Intr + 1362517 1362674  158  0  2   76   96   122 0.915  10.61
 2.05 Term + 1366611 1366956  346  0  1   79   48   119 0.553   0.97
 2.06 PlyA + 1368732 1368737    6                               1.05

 3.00 Prom + 1371276 1371315   40                              -5.76
 3.01 Init + 1375986 1376085  100  2  1   81   80   280 0.999  26.92
 3.02 Intr + 1385925 1386031  107  1  2   72   87    36 0.159   1.83
 3.03 Intr + 1388650 1388844  195  0  0  106   30    46 0.087   0.21
 3.04 Intr + 1389346 1390778 1433  0  2  106   52   757 0.006  62.25
 3.05 Intr + 1402863 1402934   72  0  0   70   84    49 0.065   1.22
 3.06 Intr + 1403518 1403592   75  1  0   89   93    38 0.077   3.03
 3.07 Intr + 1408491 1408779  289  0  1  -42   38   555 0.221  34.75
 3.08 Intr + 1408891 1409613  723  0  0  -19   63  1000 0.921  78.43
 3.09 Intr + 1410243 1410372  130  2  1   48   55   101 0.504   3.07
 3.10 Intr + 1415714 1415854  141  0  0   82   72   174 0.298  15.52
 3.11 Intr + 1417055 1417347  293  0  2  109   78   290 0.781  26.95
 3.12 Intr + 1417956 1418060  105  2  0  107   94   -15 0.566   1.41
 3.13 Term + 1421219 1421281   63  1  0  117   53    15 0.603  -1.21
 3.14 PlyA + 1421416 1421421    6                               1.05

 4.06 PlyA - 1421952 1421947    6                               1.05
 4.05 Term - 1424257 1424235   23  2  2   81   49    21 0.259  -4.03
 4.04 Intr - 1424383 1424315   69  2  0   86   75    78 0.255   5.45
 4.03 Intr - 1445234 1445140   95  1  2   24   74   102 0.098   2.01
 4.02 Intr - 1447996 1447819  178  2  1   41   22   151 0.156   2.78
 4.01 Intr - 1454919 1454884   36  1  0   34  111    53 0.012   0.43

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 1371278 1371061  218  1  2   56   81   201 0.801  14.35
S.002 Init - 1373853 1373816   38  0  2   81   72    34 0.828   0.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f_30632048|GENSCAN_predicted_peptide_1|751_aa
MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQY
EINLLELIQRRRTRIGYSFKKDEIENSIVHRVQGVFQRASAKWKDDVQLWLSYVAFCKKW
LCGLWQPNGKWKIDCLQKAQGNYFFAHCAFIQSAQNFIKKMELMHAEKLRKEKEEFEKAS
MDVENPDYSEEILKGELAWIIYKNSVSIIKGAEFHVSLLSIAQLFDFAKDLQKEIYDDLQ
ALHTDDPLTWDYVARRELEIESQTEEQPTTKQAKAVEVGRKEERCCAVYEEAVKTLPTGE
LHQTMRLERTMTVFRKAHELKLLSECQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGT
MWQLKLQVLIESKSPDIAMLFEEAFVHLKPQKALLAVIGADSVTLKNKYLDWAYRSGGYK
KARAVFKSLQESRPFSVDFFRKMIQFEKEQADWRFCGGSSGGQPGRRVTWPTASRATSRG
PQGMDLQAAGAQAQGAAEPSRGPPLPSARGAPPSPEVSAAWGPGATASRSLGREVAGPGW
AGAAGPGKRLWPASGRPATRSAVWARARAENGQAAGPRGCGAGKAEGVGGRSGSAETAVR
PLGAAADLVNGSLYRLGAERLEARGTQSIPNDSPARGEGTHSEEEGFAMDEEDSDGELNT
WELSEGTNCPPKEQPGDLFNEDWDSELKADQGNPYDADDIQESISQELKPWVCCAPQGDM
IYDPSWHHPPPLIPYYSKMVFETGQFDDAED

>gi568815581f_30632048|GENSCAN_predicted_CDS_1|2256_bp
atggcagagataattcaggaacgcatagaagatcggctcccggaattggaacagctggag
cgcattggactgttcagtcatgcggagattaaggctatcattaagaaggcttccgatcta
gagtacaaaatccagagaagaacccttttcaaggaagactttatcaattatgttcaatat
gaaattaatcttttggagctgatccagagaagaagaacacgcattggatattcatttaag
aaggatgagattgagaattctattgtacaccgggtacaaggtgttttccagcgtgcctca
gcaaaatggaaagacgatgttcaactttggctctcctatgtggctttttgtaagaagtgg
ctttgtggattatggcagccaaatgggaaatggaagatcgattgtcttcagaaagcgcaa
ggcaactatttcttcgcgcactgcgctttcatccagagtgcccaaaactttataaagaag
atggagctgatgcatgctgaaaaactgaggaaggagaaggaagaatttgaaaaagccagt
atggatgtggagaatcctgattattctgaagaaatccttaagggcgagttggcatggatc
atctacaaaaattctgtaagcataattaaaggtgcagaatttcacgtgtcactgctttcg
attgcacagctatttgactttgccaaagatctacaaaaagagatttatgatgaccttcag
gctctacacacagatgatcctctcacttgggattatgtggcaaggcgagaattagagatt
gagtcacagacagaagagcagcctacaacgaaacaagccaaagcagtggaggtcggccgg
aaggaggagaggtgctgtgctgtgtatgaagaggcagtgaagactctgccaacaggtgaa
cttcaccaaaccatgaggttggaaagaaccatgactgtattcaggaaggcacatgaactg
aagcttctgtcagaatgccaatacaagcagttgagtgtttcgttgctgtgttataacttc
ctgagggaagctctggaagtggcagtagctggaactgaattgtttagagactctgggaca
atgtggcagctgaagctgcaggtgctgatcgagtcaaagagccctgacatagccatgctt
tttgaagaagcctttgtgcacctgaaaccccagaaagctctcttagctgtcataggtgcc
gactcagtaaccctgaagaataagtacctggattgggcttatcgaagtggtggctacaaa
aaggccagagctgtgtttaaaagtttacaggagagccgaccattttcagttgactttttc
aggaaaatgattcagtttgaaaaggagcaagctgattggcgcttctgcggcggatcctcg
ggcgggcagccgggccggcgcgtcacgtggcccacggcgtccagggcgaccagccgcggg
ccgcagggcatggaccttcaggccgccggggcccaggcgcagggggccgcggagccgtct
cggggcccgccgctgcctagcgcgcggggggcgccccccagcccggaggtgagcgccgcg
tgggggccaggagcaacagccagccgcagcctggggcgggaagtcgcggggccgggctgg
gcgggggccgcggggccggggaagcgcctctggccggcctcgggccgccccgcgacacgg
agcgctgtttgggctcgcgctcgagctgaaaacggccaggccgcggggccgcggggctgc
ggggcggggaaagccgagggcgtgggtgggcgctctgggtcagcagagacggctgtccgc
ccgctgggcgccgctgcggatttggtaaatgggagtctgtaccggctaggtgctgagcgg
cttgaagcccgtggaacacagagcattcctaatgacagtcctgcccggggtgagggcacc
cattctgaagaggaaggctttgccatggatgaggaggactctgatggagaactgaatacc
tgggagctgtcagaagggacaaactgtccacccaaggaacagcctggcgatctttttaat
gaggactgggactcggagttgaaagcagatcaagggaatccatatgatgctgacgacatc
caggagagcatttctcaagagcttaaaccttgggtgtgctgtgccccacaaggagacatg
atctatgaccccagctggcaccatccgcctccactgataccctattattccaagatggtc
tttgaaacaggacagtttgacgatgctgaagattga

>gi568815581f_30632048|GENSCAN_predicted_peptide_2|325_aa
MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA
AAAAGAAVLPVKKPKMEHVQADHELFLQAFENVNEELPARRKRNREDGEKTFVAQMTVFD
KNRRLQLLDGEYEVAMQEMEECPISKKRATWETILDGKYHPKGARIDVSINECYDGSYAG
NPQDIHRQPGFAFSRNGPVKRTPITHILVCRFIADNQMNHACMLFVENYGQKIIKKNLCR
NFMLHLVSMHDFNLISIMSIDKAVTKLREMQQKLEKGESASPANEEITEEQNGTANGFSE
INSKEKALETDSVSGVSKQSKKQKL

>gi568815581f_30632048|GENSCAN_predicted_CDS_2|978_bp
atggcgcctcagaagcacggcggtgggggagggggcggctcggggcccagcgcggggtcc
gggggaggcggcttcgggggttcggcggcggtggcggcggcgacggcttcgggcggcaaa
tccggcggcgggagctgtggagggggtggcagttactcggcctcctcctcctcctccgcg
gcggcagcggcgggggctgcggtgttaccggtgaagaagccgaaaatggagcacgtccag
gctgaccacgagcttttcctccaggcctttgagaatgtcaatgaagagcttccagccaga
agaaaacgaaatcgtgaggatggggaaaagacatttgttgcacaaatgacagtatttgat
aaaaacaggcgcttacagcttttagatggggaatatgaagtagccatgcaggaaatggaa
gaatgtccaataagcaagaaaagagcaacatgggagactattcttgatgggaagtatcat
ccaaaaggtgctaggatagatgtttctatcaatgagtgttatgatggctcctatgcagga
aatcctcaggatattcatcgccaacctggatttgcttttagtcgcaacggaccagttaag
agaacacctatcacacatattcttgtgtgcaggtttattgctgacaatcaaatgaatcat
gcctgtatgctgtttgtagaaaattatggacagaaaataattaagaagaatttatgtcga
aacttcatgcttcatctagtcagcatgcatgactttaatcttattagcataatgtcaata
gataaagctgttaccaagctccgtgaaatgcagcaaaaattagaaaagggggaatctgct
tcccctgcaaacgaagaaataactgaagaacaaaatgggacagcaaatggatttagtgaa
attaactcaaaagagaaagctttggaaacagatagtgtctcaggggtttcaaaacagagc
aaaaaacaaaaactctga

>gi568815581f_30632048|GENSCAN_predicted_peptide_3|1241_aa
MEEDDDDSDYPEELEDDDEDASYSTESSFSSTPESGKIAVECRPSEEIVDVRWEELHSLI
QVCGDKNSKVSCSPLKEEYSRISPQRRKNSGCQNWTSTSEDPKARSRDFLGKLCRAPTPP
HPTTAGRWSPGTTPMSALPQEPTENLAPFLKELDSAGELPLGPEPFLAAHQDLNDKRTPE
ERLPEVVPLLNRDQNQALVQLPRLKWVQTTDLDRAAGHQADEILVPLDSKVSRPTKFVVS
PKNLKKDLAERWSLPEIVGIPHQLSKPQRQKQTLPDDYLSMDTLYPGSLPPELRVNADEP
PGPPEQVGLSQFHLEPKSQNPETLEDIQSSSLQEEAPAQLLQLPQEVEPSTQQEAPALPP
ESSMESLAQTPLNHEVTVQPPGEDQAHYNLPKFTVKPADVEVTMTSEPKNETESTQAQQE
APIQPPEEAEPSSTALRTTDPPPEHPEVTLPPSDKGQAQHSHLTEATVQPLDLELSITTE
PTTEVKPSPTTEETSAQPPDPGLAITPEPTTEIGHSTALEKTRAPHPDQVQTLHRSLTEV
TGPPTKLESSQDSLVQSETAPEEQKASTSTNICELCTCGDETLSCVGLSPKQRLRQVPVP
EPDTYNGIFTTLILNRNPLTTVEDPYLFELPALKYLDMGTTHITLTTLKNILTMTVELEK
LDGDVISKAVTEMLARTIKYLQPNPASQAKLTMLNTVCKIQGQVKNPGYPQLEGLLSECL
IRHQKELGNESNFSDALLDAGESMKHLAEVKDSLDIEKRQGKIPDEELRQALEKFEDSKE
VAETSMHNLLETNIEQVSQLRALAEAQLNYHWQAMQILDELAEKLKRRMREASSRPKREY
KPKFWEPFDLGEPEQSNGGFPCTTVPKIAASSPFRSSDKSIWTPSRSMPPLDQPSCKVLY
DFQPENHGELGFHEGDVFTLINQINENWYQGMLDSQLGFFLLSYMDVLMPLPSDSLVPPP
RPSIHTGWHPRQVSCLPWAPAAKAVSKPAGATQARALEPGPRKPVSLWHKLPPPATYTPP
QHTSHGTTAPAVLLRAKHKGSTEEASVGNPEGAFMKMLQARKQHMSTQLTIESEAPSDSS
GINLSGFGGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRT
GLLMKLLSEQQEAKALNVEWDTDQQKTNYINENMEQNEQKEQKSSELMKEVPGDDYKNKL
IFAISVTVILIILIIIFCLIEVNSHKRASEKYKDNPSISGA

>gi568815581f_30632048|GENSCAN_predicted_CDS_3|3726_bp
atggaggaggacgacgatgactccgattatccggaggagctggaagatgacgacgaggac
gccagttactccacggaaagcagcttcagcagcactccagaaagtggtaaaatagctgtg
gagtgcagacccagtgaagagattgtagatgtcagatgggaagaactacacagtttaatt
caagtatgtggagataaaaactcaaaggtcagttgctctcccctgaaggaagagtattct
cggatttcacctcagaggaggaagaattcaggctgccagaactggactagcacttctgaa
gatcccaaggccaggtcccgtgacttccttgggaagctctgccgtgcccccaccccaccc
caccccaccacagcaggccgctggagtcctgggaccaccccgatgtcagccctgcctcag
gaaccaactgaaaatttggctccattcctgaaggaattggattcagctggagagctgccc
ctggggccagagccgttcttggctgcacatcaggacttaaatgacaagcggactccagaa
gaaaggctcccagaggtggttccgcttctcaaccgggatcagaaccaggccctagttcag
cttcctcgcctcaagtgggttcaaactacagatctagatcgggctgcaggtcatcaggca
gatgaaatacttgttccactagacagtaaggtttcaagaccaaccaaatttgttgtttcg
cccaagaacctgaagaaagatctagctgaacgttggagccttcctgagattgttgggatt
ccacaccaattatccaaacctcagcgtcagaaacagactttgccagatgattatttgagt
atggacacactgtatcccggcagcctacctccagaactccgggtgaacgcagatgagcct
ccagggcctcctgagcaagttggactttctcaattccatctagagcccaaaagtcaaaat
ccagagacccttgaagacatccagtcctcttcactccaggaagaagccccagcgcagctt
ctacagctccctcaggaggtagaaccttcaacccagcaggaggccccagctctgcctcca
gagtcctctatggagagtctagctcaaactccactgaatcatgaagtgacagttcaacct
ccaggtgaggatcaagctcattataatttgcccaagtttacagtcaaacctgcagatgtg
gaggttaccatgacttcagagcctaaaaatgagacagaatctacccaagcccagcaggag
gccccaattcagcctcccgaggaggcggaaccttcttctacagccctgaggactacagat
cctcctccagaacaccctgaggtgacacttccaccttcagacaagggtcaggctcagcat
tcacacctgactgaagccacagttcaacctctggacctggagcttagcataactacagag
cctactacagaggttaaaccgtctccaaccacggaggaaacctcagctcagcctccagac
ccggggcttgccataactccagaacccactacagagattggacattccacagccctggag
aagactagagctcctcatccagaccaggttcagactctgcatcgaagcctgactgaagtc
acaggtccacctacaaagttagaatcttcgcaggattcattggtgcagtctgaaactgca
ccagaggaacagaaggcctccacaagcaccaacatatgtgagctctgcacctgcggagat
gagactctgtcatgtgttggtctcagcccaaagcagaggctccgccaagtgcctgtgcca
gagcccgacacctacaatggcatcttcaccaccttaattctcaatcgcaatcctctgact
actgtcgaagatccatatctctttgaactgccggcattaaaatatctagacatgggaaca
acacacatcacacttacaacacttaagaacattctcacgatgactgttgaactggaaaaa
ctagatggagatgtcatcagcaaggcggtgacggaaatgctggcaaggaccatcaagtac
ctgcagcccaacccagcctcacaggctaagctgaccatgctcaacacagtgtgcaagatc
cagggccaggtgaagaaccccggctacccgcagttggaggggctcctgagcgagtgcctg
atccgccaccagaaggagctgggcaacgagtccaacttcagtgacgcactgctggatgcc
ggcgagtccatgaagcacctggcagaggtgaaggactccctggacatagagaagcggcag
ggcaagatccccgatgaggagctgcgtcaggcgctggagaagtttgaggactccaaggag
gtagcagaaaccagcatgcacaacctcctggagaccaacattgagcaggtgagtcaactc
cgggccctggcggaggcgcagctgaactaccactggcaggccatgcagatcctggacgag
ctggcagagaagctcaagcgcaggatgcgggaagcttcctcacgccccaagcgggagtat
aagcccaagttctgggagccctttgacctcggagagcctgagcagtccaatgggggcttc
ccctgcaccacagtccccaagattgcagcttcatcccctttccgatcttccgacaagtcc
atctggactcctagcaggagcatgccgcccctagaccagccaagctgcaaggtgctgtat
gacttccagcctgagaaccatggggagctgggcttccatgagggtgacgtcttcacgctg
atcaaccagatcaacgagaactggtaccagggcatgctggacagccagttgggcttcttc
ctgctcagctacatggacgtgctcatgcctctgcccagtgactcactggtgcccccgccc
cgcccctccatccacactgggtggcacccccgccaggtctcctgccttccatgggctcct
gctgccaaggcggtgtccaagcctgccggcgccacccaggcccgggcccttgagccaggc
ccacggaagcctgtgtcactctggcacaagctgccaccaccagccacctacacacccccc
cagcacacctcgcacgggaccacagccccagccgtgctgctaagggccaagcacaaaggc
tccactgaagaagcatctgtagggaatccagaaggagcgttcatgaagatgttacaagcc
cggaagcagcacatgagcactcagctgactattgagtcggaggcgccctcagacagcagt
ggcatcaacttgtcaggctttgggggtgatcagcttgaaattcagctaaccgagcagcta
cggtccctcatccccaacgaggatgtgagaaagttcatgtctcatgttatccggaccttg
aaaatggaatgttcagaaacacatgtgcaagggagctgtgccaagctcatgttgcgaaca
ggcctcctgatgaagcttctcagcgagcagcaggaagcaaaggcattgaatgtagaatgg
gatacggaccaacaaaaaacaaattatattaatgagaacatggaacagaatgaacagaaa
gagcagaagtcaagtgagctcatgaaagaagttccaggagatgactataagaacaaactc
atcttcgcaatatctgtgactgtaatactaataattttgattataattttttgtcttata
gaggtgaattcacataaaagggcatcagaaaaatacaaagacaacccatcaatatcagga
gcctga

>gi568815581f_30632048|GENSCAN_predicted_peptide_4|133_aa
XSWIREPKILSSARCEGQWLILKFLSYSLIRFLPKLWFQLTPLSEAASEFSCYGNGAAEI
PRNLLVRLIASPSCFTFCHELKLPEIFPEAKQMPALCLYSPQNLTQRPHKTLFVQPEDAK
EELEGAEADNDKG

>gi568815581f_30632048|GENSCAN_predicted_CDS_4|402_bp
ngttcttggattcgagagcctaagatcctgagttcagctcggtgtgagggccagtggttg
atcttgaagtttctttcctactccctcatccgtttcctgcccaagctgtggttccagctg
actcccctatcagaggctgcgagtgagttcagttgttatggcaacggggctgcggagatc
cccaggaacctgctggtccgcctcattgcctcaccttcctgcttcaccttctgccatgag
ttaaagctccctgagatctttccagaagccaagcagatgccagcactgtgcttgtacagc
ccgcagaacttgactcagaggccccacaagaccctctttgtccagccagaagatgcaaag
gaagaattagaaggtgcagaagcagataatgataaaggttag