Result of FASTA (omim) for pF1KA0058
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0058, 168 aa
  1>>>pF1KA0058 168 - 168 aa - 168 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.6291+/-0.000305; mu= -0.2515+/- 0.019
 mean_var=241.4927+/-50.956, 0's: 0 Z-trim(125.4): 17  B-trim: 1902 in 2/59
 Lambda= 0.082532
 statistics sampled from 49047 (49071) to 49047 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.839), E-opt: 0.2 (0.575), width:  16
 Scan time:  6.360

The best scores are:                                      opt bits E(85289)
NP_055579 (OMIM: 607431) DAZ-associated protein 2  ( 168) 1193 153.2 1.8e-37
NP_001129741 (OMIM: 607431) DAZ-associated protein ( 153)  883 116.3 2.2e-26
NP_001129738 (OMIM: 607431) DAZ-associated protein ( 207)  723 97.4 1.5e-20
NP_001129739 (OMIM: 607431) DAZ-associated protein ( 136)  668 90.6   1e-18
NP_001129736 (OMIM: 607431) DAZ-associated protein ( 146)  635 86.7 1.6e-17
NP_001129740 (OMIM: 607431) DAZ-associated protein (  86)  341 51.5 3.9e-07


>>NP_055579 (OMIM: 607431) DAZ-associated protein 2 isof  (168 aa)
 initn: 1193 init1: 1193 opt: 1193  Z-score: 793.7  bits: 153.2 E(85289): 1.8e-37
Smith-Waterman score: 1193; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168)

               10        20        30        40        50        60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
               70        80        90       100       110       120

              130       140       150       160        
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
              130       140       150       160        

>>NP_001129741 (OMIM: 607431) DAZ-associated protein 2 i  (153 aa)
 initn: 883 init1: 883 opt: 883  Z-score: 594.7  bits: 116.3 E(85289): 2.2e-26
Smith-Waterman score: 883; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)

               10        20        30        40        50        60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
               70        80        90       100       110       120

              130       140       150       160        
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
       ::::::                                          
NP_001 TAGNIPVKEDQDHDREQGEEDNGDNNLERRGKM               
              130       140       150                  

>>NP_001129738 (OMIM: 607431) DAZ-associated protein 2 i  (207 aa)
 initn: 723 init1: 723 opt: 723  Z-score: 490.1  bits: 97.4 E(85289): 1.5e-20
Smith-Waterman score: 723; 99.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
       ::::::::::::::::::::::::::::::::::::::::.::                 
NP_001 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPASTSWMPSQCCSACSHAGSQ
               70        80        90       100       110       120

              130       140       150       160                    
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW            
                                                                   
NP_001 RPRNSAEGELLHGWFRWWLHHLVRNQGHLCAGKDITYLQHFSQCNCFSHINLKLQFRHML
              130       140       150       160       170       180

>>NP_001129739 (OMIM: 607431) DAZ-associated protein 2 i  (136 aa)
 initn: 653 init1: 653 opt: 668  Z-score: 457.1  bits: 90.6 E(85289): 1e-18
Smith-Waterman score: 903; 81.0% identity (81.0% similar) in 168 aa overlap (1-168:1-136)

               10        20        30        40        50        60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
       ::::::::::::::::::::::::::::::::::::::::::::                
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE----------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
                       ::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----------------SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
                           50        60        70        80        

              130       140       150       160        
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
       90       100       110       120       130      

>>NP_001129736 (OMIM: 607431) DAZ-associated protein 2 i  (146 aa)
 initn: 636 init1: 596 opt: 635  Z-score: 435.4  bits: 86.7 E(85289): 1.6e-17
Smith-Waterman score: 995; 86.9% identity (86.9% similar) in 168 aa overlap (1-168:1-146)

               10        20        30        40        50        60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
       ::::                      ::::::::::::::::::::::::::::::::::
NP_001 MSAA----------------------IPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
                                     70        80        90        

              130       140       150       160        
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
      100       110       120       130       140      

>>NP_001129740 (OMIM: 607431) DAZ-associated protein 2 i  (86 aa)
 initn: 394 init1: 341 opt: 341  Z-score: 249.2  bits: 51.5 E(85289): 3.9e-07
Smith-Waterman score: 463; 51.2% identity (51.2% similar) in 168 aa overlap (1-168:1-86)

               10        20        30        40        50        60
pF1KA0 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT
       ::::::::::::::::::::::::::::::::::::::::::::                
NP_001 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE----------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KA0 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

              130       140       150       160        
pF1KA0 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
             ::::::::::::::::::::::::::::::::::::::::::
NP_001 ------PPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
                 50        60        70        80      




168 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 19:28:33 2016 done: Thu Nov  3 19:28:34 2016
 Total Scan time:  6.360 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]
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