Result of FASTA (omim) for pF1KSDA0679
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0679, 916 aa
  1>>>pF1KSDA0679 916 - 916 aa - 916 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7985+/-0.000367; mu= 15.3969+/- 0.023
 mean_var=112.9641+/-22.570, 0's: 0 Z-trim(116.1): 7  B-trim: 24 in 1/53
 Lambda= 0.120671
 statistics sampled from 26955 (26959) to 26955 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.316), width:  16
 Scan time: 14.000

The best scores are:                                      opt bits E(85289)
NP_036347 (OMIM: 604039) protein O-GlcNAcase isofo ( 916) 6144 1081.0       0
XP_016871074 (OMIM: 604039) PREDICTED: protein O-G ( 801) 5353 943.3       0
XP_016871075 (OMIM: 604039) PREDICTED: protein O-G ( 778) 5086 896.8       0
NP_001135906 (OMIM: 604039) protein O-GlcNAcase is ( 863) 3477 616.7 1.5e-175


>>NP_036347 (OMIM: 604039) protein O-GlcNAcase isoform a  (916 aa)
 initn: 6144 init1: 6144 opt: 6144  Z-score: 5781.6  bits: 1081.0 E(85289):    0
Smith-Waterman score: 6144; 100.0% identity (100.0% similar) in 916 aa overlap (1-916:1-916)

               10        20        30        40        50        60
pF1KSD MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KSD SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KSD LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KSD FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KSD LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KSD SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA
              850       860       870       880       890       900

              910      
pF1KSD KMEGFPKDVVILGRSL
       ::::::::::::::::
NP_036 KMEGFPKDVVILGRSL
              910      

>>XP_016871074 (OMIM: 604039) PREDICTED: protein O-GlcNA  (801 aa)
 initn: 5353 init1: 5353 opt: 5353  Z-score: 5038.2  bits: 943.3 E(85289):    0
Smith-Waterman score: 5353; 100.0% identity (100.0% similar) in 800 aa overlap (117-916:2-801)

         90       100       110       120       130       140      
pF1KSD KWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFS
                                     ::::::::::::::::::::::::::::::
XP_016                              MEQLMTLISAAREYEIEFIYAISPGLDITFS
                                            10        20        30 

        150       160       170       180       190       200      
pF1KSD NPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYL
              40        50        60        70        80        90 

        210       220       230       240       250       260      
pF1KSD GEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEE
             100       110       120       130       140       150 

        270       280       290       300       310       320      
pF1KSD VSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIH
             160       170       180       190       200       210 

        330       340       350       360       370       380      
pF1KSD TLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTE
             220       230       240       250       260       270 

        390       400       410       420       430       440      
pF1KSD WLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSG
             280       290       300       310       320       330 

        450       460       470       480       490       500      
pF1KSD EPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESI
             340       350       360       370       380       390 

        510       520       530       540       550       560      
pF1KSD AESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFY
             400       410       420       430       440       450 

        570       580       590       600       610       620      
pF1KSD LPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFT
             460       470       480       490       500       510 

        630       640       650       660       670       680      
pF1KSD RLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLA
             520       530       540       550       560       570 

        690       700       710       720       730       740      
pF1KSD GEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQS
             580       590       600       610       620       630 

        750       760       770       780       790       800      
pF1KSD QPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYT
             640       650       660       670       680       690 

        810       820       830       840       850       860      
pF1KSD KPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLS
             700       710       720       730       740       750 

        870       880       890       900       910      
pF1KSD SLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL
             760       770       780       790       800 

>>XP_016871075 (OMIM: 604039) PREDICTED: protein O-GlcNA  (778 aa)
 initn: 5082 init1: 5082 opt: 5086  Z-score: 4787.2  bits: 896.8 E(85289):    0
Smith-Waterman score: 5086; 99.7% identity (99.7% similar) in 761 aa overlap (156-916:20-778)

         130       140       150       160       170       180     
pF1KSD AREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADK
                                     :::  :::::::::::::::::::::::::
XP_016            MPQKMTTNIGCFGERCIQWRKL--VSQFGCRSFALLFDDIDHNMCAADK
                          10        20          30        40       

         190       200       210       220       230       240     
pF1KSD EVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGI
        50        60        70        80        90       100       

         250       260       270       280       290       300     
pF1KSD EVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIP
       110       120       130       140       150       160       

         310       320       330       340       350       360     
pF1KSD RLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSD
       170       180       190       200       210       220       

         370       380       390       400       410       420     
pF1KSD EDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNA
       230       240       250       260       270       280       

         430       440       450       460       470       480     
pF1KSD TTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILS
       290       300       310       320       330       340       

         490       500       510       520       530       540     
pF1KSD EIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVPGPNEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVPGPNEK
       350       360       370       380       390       400       

         550       560       570       580       590       600     
pF1KSD PLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIE
       410       420       430       440       450       460       

         610       620       630       640       650       660     
pF1KSD EWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRS
       470       480       490       500       510       520       

         670       680       690       700       710       720     
pF1KSD HSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDE
       530       540       550       560       570       580       

         730       740       750       760       770       780     
pF1KSD ASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVD
       590       600       610       620       630       640       

         790       800       810       820       830       840     
pF1KSD VTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKM
       650       660       670       680       690       700       

         850       860       870       880       890       900     
pF1KSD DIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGF
       710       720       730       740       750       760       

         910      
pF1KSD PKDVVILGRSL
       :::::::::::
XP_016 PKDVVILGRSL
       770        

>>NP_001135906 (OMIM: 604039) protein O-GlcNAcase isofor  (863 aa)
 initn: 3477 init1: 3477 opt: 3477  Z-score: 3272.7  bits: 616.7 E(85289): 1.5e-175
Smith-Waterman score: 5687; 94.2% identity (94.2% similar) in 916 aa overlap (1-916:1-863)

               10        20        30        40        50        60
pF1KSD MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLE
       :::::::::::::::::::::::::::::::::::::::::::::               
NP_001 TELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVM---------------
              310       320       330       340                    

              370       380       390       400       410       420
pF1KSD NEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAA
                                             ::::::::::::::::::::::
NP_001 --------------------------------------SRQVAHSGAKASVVDGTPLVAA
                                               350       360       

              430       440       450       460       470       480
pF1KSD PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKND
       370       380       390       400       410       420       

              490       500       510       520       530       540
pF1KSD NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVP
       430       440       450       460       470       480       

              550       560       570       580       590       600
pF1KSD GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKD
       490       500       510       520       530       540       

              610       620       630       640       650       660
pF1KSD SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQW
       550       560       570       580       590       600       

              670       680       690       700       710       720
pF1KSD LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPY
       610       620       630       640       650       660       

              730       740       750       760       770       780
pF1KSD FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYA
       670       680       690       700       710       720       

              790       800       810       820       830       840
pF1KSD LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFP
       730       740       750       760       770       780       

              850       860       870       880       890       900
pF1KSD SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIA
       790       800       810       820       830       840       

              910      
pF1KSD KMEGFPKDVVILGRSL
       ::::::::::::::::
NP_001 KMEGFPKDVVILGRSL
       850       860   




916 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 18:38:55 2016 done: Thu Nov  3 18:38:57 2016
 Total Scan time: 14.000 Total Display time:  0.120

Function used was FASTA [36.3.4 Apr, 2011]
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