Result of FASTA (ccds) for pF1KSDA0642
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0642, 1320 aa
  1>>>pF1KSDA0642 1320 - 1320 aa - 1320 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.0429+/-0.00117; mu= -9.8761+/- 0.070
 mean_var=595.4297+/-122.630, 0's: 0 Z-trim(115.4): 130  B-trim: 105 in 1/54
 Lambda= 0.052560
 statistics sampled from 15845 (15951) to 15845 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.49), width:  16
 Scan time:  6.070

The best scores are:                                      opt bits E(32554)
CCDS46542.1 GIGYF2 gene_id:26058|Hs108|chr2        (1320) 8875 689.2 1.9e-197
CCDS33401.1 GIGYF2 gene_id:26058|Hs108|chr2        (1299) 7501 585.0 4.3e-166
CCDS46543.1 GIGYF2 gene_id:26058|Hs108|chr2        (1293) 7436 580.1 1.3e-164
CCDS34708.1 GIGYF1 gene_id:64599|Hs108|chr7        (1035)  870 82.1 8.6e-15


>>CCDS46542.1 GIGYF2 gene_id:26058|Hs108|chr2             (1320 aa)
 initn: 8875 init1: 8875 opt: 8875  Z-score: 3658.3  bits: 689.2 E(32554): 1.9e-197
Smith-Waterman score: 8875; 100.0% identity (100.0% similar) in 1320 aa overlap (1-1320:1-1320)

               10        20        30        40        50        60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD GSHNEEAKEPDKTNKKEGEKTDRVGVASEETPQTSSSSARPGTPSDHQSQEASQFERKDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GSHNEEAKEPDKTNKKEGEKTDRVGVASEETPQTSSSSARPGTPSDHQSQEASQFERKDE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD PKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNPS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD PTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQEH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD RAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KSD LGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQV
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KSD LAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTAS
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KSD QPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQE
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KSD ELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEA
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KSD LRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEE
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KSD EERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQ
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KSD SQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTT
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KSD KSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWAS
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KSD DLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEEE
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KSD KLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLG
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KSD DTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTL
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KSD HSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY
             1270      1280      1290      1300      1310      1320

>>CCDS33401.1 GIGYF2 gene_id:26058|Hs108|chr2             (1299 aa)
 initn: 7383 init1: 6178 opt: 7501  Z-score: 3095.3  bits: 585.0 E(32554): 4.3e-166
Smith-Waterman score: 8645; 98.3% identity (98.3% similar) in 1321 aa overlap (1-1320:1-1299)

               10        20        30        40        50        60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
CCDS33 SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVG--
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
                           ::::::::::::::::::::::::::::::::::::::::
CCDS33 --------------------RPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
                          180       190       200       210        

              250       260       270       280       290       300
pF1KSD GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
      220       230       240       250       260       270        

              310       320       330       340       350       360
pF1KSD DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
      280       290       300       310       320       330        

              370       380        390       400       410         
pF1KSD GSHNEEAKEPDKTNKKEGEKTDRVGV-ASEETPQTSSSSARPGTPSDHQSQEASQFERKD
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS33 GSHNEEAKEPDKTNKKEGEKTDRVGVEASEETPQTSSSSARPGTPSDHQSQEASQFERKD
      340       350       360       370       380       390        

     420       430       440       450       460       470         
pF1KSD EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
      400       410       420       430       440       450        

     480       490       500       510       520       530         
pF1KSD SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
      460       470       480       490       500       510        

     540       550       560       570       580       590         
pF1KSD HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
      520       530       540       550       560       570        

     600       610       620       630       640       650         
pF1KSD PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
      580       590       600       610       620       630        

     660       670       680       690       700       710         
pF1KSD VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
      640       650       660       670       680       690        

     720       730       740       750       760       770         
pF1KSD SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
      700       710       720       730       740       750        

     780       790       800       810       820       830         
pF1KSD EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
      760       770       780       790       800       810        

     840       850       860       870       880       890         
pF1KSD ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
      820       830       840       850       860       870        

     900       910       920       930       940       950         
pF1KSD EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
      880       890       900       910       920       930        

     960       970       980       990      1000      1010         
pF1KSD QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
      940       950       960       970       980       990        

    1020      1030      1040      1050      1060      1070         
pF1KSD TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
     1000      1010      1020      1030      1040      1050        

    1080      1090      1100      1110      1120      1130         
pF1KSD SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
     1060      1070      1080      1090      1100      1110        

    1140      1150      1160      1170      1180      1190         
pF1KSD EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
     1120      1130      1140      1150      1160      1170        

    1200      1210      1220      1230      1240      1250         
pF1KSD GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
     1180      1190      1200      1210      1220      1230        

    1260      1270      1280      1290      1300      1310         
pF1KSD LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
     1240      1250      1260      1270      1280      1290        

    1320
pF1KSD Y
       :
CCDS33 Y
        

>>CCDS46543.1 GIGYF2 gene_id:26058|Hs108|chr2             (1293 aa)
 initn: 7383 init1: 6178 opt: 7436  Z-score: 3068.7  bits: 580.1 E(32554): 1.3e-164
Smith-Waterman score: 8580; 97.8% identity (97.8% similar) in 1321 aa overlap (1-1320:1-1293)

               10        20        30        40        50        60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
CCDS46 SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVG--
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
                           ::::::::::::::::::::::::::::::::::::::::
CCDS46 --------------------RPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
                          180       190       200       210        

              250       260       270       280       290       300
pF1KSD GWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
       :::::::::::::::::::      :::::::::::::::::::::::::::::::::::
CCDS46 GWRLAGSRRDGERWRPHSP------GWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSI
      220       230             240       250       260       270  

              310       320       330       340       350       360
pF1KSD DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSE
            280       290       300       310       320       330  

              370       380        390       400       410         
pF1KSD GSHNEEAKEPDKTNKKEGEKTDRVGV-ASEETPQTSSSSARPGTPSDHQSQEASQFERKD
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS46 GSHNEEAKEPDKTNKKEGEKTDRVGVEASEETPQTSSSSARPGTPSDHQSQEASQFERKD
            340       350       360       370       380       390  

     420       430       440       450       460       470         
pF1KSD EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNP
            400       410       420       430       440       450  

     480       490       500       510       520       530         
pF1KSD SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERLASKLQE
            460       470       480       490       500       510  

     540       550       560       570       580       590         
pF1KSD HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESFQ
            520       530       540       550       560       570  

     600       610       620       630       640       650         
pF1KSD PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQ
            580       590       600       610       620       630  

     660       670       680       690       700       710         
pF1KSD VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTA
            640       650       660       670       680       690  

     720       730       740       750       760       770         
pF1KSD SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQ
            700       710       720       730       740       750  

     780       790       800       810       820       830         
pF1KSD EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEE
            760       770       780       790       800       810  

     840       850       860       870       880       890         
pF1KSD ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHE
            820       830       840       850       860       870  

     900       910       920       930       940       950         
pF1KSD EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTAC
            880       890       900       910       920       930  

     960       970       980       990      1000      1010         
pF1KSD QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGT
            940       950       960       970       980       990  

    1020      1030      1040      1050      1060      1070         
pF1KSD TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWA
           1000      1010      1020      1030      1040      1050  

    1080      1090      1100      1110      1120      1130         
pF1KSD SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEE
           1060      1070      1080      1090      1100      1110  

    1140      1150      1160      1170      1180      1190         
pF1KSD EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYL
           1120      1130      1140      1150      1160      1170  

    1200      1210      1220      1230      1240      1250         
pF1KSD GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHST
           1180      1190      1200      1210      1220      1230  

    1260      1270      1280      1290      1300      1310         
pF1KSD LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDD
           1240      1250      1260      1270      1280      1290  

    1320
pF1KSD Y
       :
CCDS46 Y
        

>>CCDS34708.1 GIGYF1 gene_id:64599|Hs108|chr7             (1035 aa)
 initn: 2361 init1: 713 opt: 870  Z-score: 379.0  bits: 82.1 E(32554): 8.6e-15
Smith-Waterman score: 2973; 42.8% identity (61.8% similar) in 1363 aa overlap (1-1320:1-1035)

               10        20        30        40        50        60
pF1KSD MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
       :::::  ::::::::::::.:::..::: :::.::::::::::::::::::..:.::.: 
CCDS34 MAAET--LNFGPEWLRALSGGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKENKVPE
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KSD DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
       .: ::::  .::.::: :::: :.:::::::::.::::.::::: :.:.:  ..:. :::
CCDS34 ELQDKEFAAVLQDEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLAGTSRGR
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KSD SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKK
       .:.:.::::::.  :::::..: .:.:::.  ::..:::::..::.::::: .:.:    
CCDS34 GSTRSRGRGRGDSCFYQRSIEEGDGAFGRSP-REIQRSQSWDDRGERRFEKSARRD----
      120       130       140        150       160       170       

              190       200       210       220       230       240
pF1KSD NGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRKHEFIRSESENWRIFREEQNGEDEDG
        :  :                 .:::::   .: ..:  ::.::::: .::::. :.:.:
CCDS34 -GARC-----------------GFEEGG---AGPRKEHARSDSENWRSLREEQE-EEEEG
                             180          190       200        210 

               250       260        270       280                  
pF1KSD GWRL-AGSRRDGERWRPHSPDG-PRSAGWREHMERRRRFEFDFR-DR-----DDERG---
       .::: :: ::::.:::  :::: ::::::::: ::::.::::.: ::     .. ::   
CCDS34 SWRLGAGPRRDGDRWRSASPDGGPRSAGWREHGERRRKFEFDLRGDRGGCGEEEGRGGGG
             220       230       240       250       260       270 

        290       300       310       320       330       340      
pF1KSD ---YRRVRSGSGSIDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMD
           :: :.  : ...:.:.::::::.: .:::::::.::::: :::  :::::::::.:
CCDS34 SSHLRRCRAPEG-FEEDKDGLPEWCLDDEDEEMGTFDASGAFLPLKKGPKEPIPEEQELD
             280        290       300       310       320       330

        350       360       370       380       390       400      
pF1KSD FRPVDEGEECSDSEGSHNEEAKEPDKTNKKEGEKTDRVGVASEETPQTSSSSARPGTPSD
       :. ..: ::   ::: .                         :: :.....   :  :..
CCDS34 FQGLEEEEE--PSEGLE-------------------------EEGPEAGGKELTPLPPQE
                340                                350       360   

        410       420       430       440       450       460      
pF1KSD HQSQEASQFERKDEPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTA
       ..:                            : :. .:. :         ::    .:  
CCDS34 EKS----------------------------SSPSPLPTLG---------PLWGTNGDGD
                                       370                380      

        470       480       490       500          510       520   
pF1KSD SPLLILPPPVPNPSPTLRPVETPVVGAPGMGSVSTEP---DDEEGLKHLEQQAEKMVAYL
             :: . .    .: ..     .::.:: .  :   .:.::::::.:.:::.:: :
CCDS34 ETAEKEPPAAEDD---IRGIQL----SPGVGSSAGPPGDLEDDEGLKHLQQEAEKLVASL
        390          400           410       420       430         

           530           540       550       560       570         
pF1KSD QDSALDDERLASKLQ----EHRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWF
       :::.:..:.... .:    .: : ....:: : : .::.::::::::::::..:::::::
CCDS34 QDSSLEEEQFTAAMQTQGLRHSAAATALPLSHGAARKWFYKDPQGEIQGPFTTQEMAEWF
     440       450       460       470       480       490         

     580       590       600       610       620       630         
pF1KSD QAGYFTMSLLVKRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTA
       :::::.:::::::.:::.:::::...::::::::.:::.::: .:..::::: .::::.:
CCDS34 QAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGNMDQERLKKQQELAA
     500       510       520       530       540       550         

       640        650       660       670                 680      
pF1KSD --LYQ-MQHLQYQQFLIQQQYAQVLAQQQKAALSS----------QQQQQLALLLQQFQT
         ::: .:: :. :.. ..:  :  : ..::::..          ::::::. .:::.:.
CCDS34 AALYQQLQHQQFLQLVSSRQLPQC-ALREKAALGDLTPPPPPPPQQQQQQLTAFLQQLQA
     560       570       580        590       600       610        

         690       700       710       720       730       740     
pF1KSD LKM-RISDQNIIPSVTRSVSVPDTGSIWELQPTASQPTVWEGGSVWDLPLDTTTPGPALE
       ::  : .:::..:...::.::::.: .:... .::. .  :. :.::.:....: :: ::
CCDS34 LKPPRGGDQNLLPTMSRSLSVPDSGRLWDVHTSASSQSGGEA-SLWDIPINSSTQGPILE
      620       630       640       650       660        670       

         750       760       770       780       790       800     
pF1KSD QLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEE
       :::  .:       :::::.:.:::::::::::.:: ::::      ::::...:.::::
CCDS34 QLQLQHKF------QERREVELRAKREEEERKRREEKRRQQ------QQEEQKRRQEEEE
       680             690       700       710             720     

         810       820       830       840       850       860     
pF1KSD LARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQE
       : :::.                                                      
CCDS34 LFRRKHV-----------------------------------------------------
         730                                                       

         870       880       890       900       910       920     
pF1KSD EEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQE
                                                     ::.::.        
CCDS34 ----------------------------------------------RQQELL--------
                                                                   

         930       940       950       960       970       980     
pF1KSD ALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQLREEQ
        :. :::::       . .: . .           :   :                    
CCDS34 -LKLLQQQQA------VPVPPAPS-----------SPPPL--------------------
       740             750                  760                    

         990      1000      1010      1020      1030      1040     
pF1KSD RRQQRELMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQ
                               :....: . . :.:::.: :  ::..::   ..   
CCDS34 ------------------------WAGLAKQGLSMKTLLELQLEGERQLHKQPPPRE---
                                      770       780       790      

        1050      1060      1070      1080      1090         1100  
pF1KSD QPNRARNNTHSNLHTSIGNSVWGSINTGPPNQWASDLVSSIWSNADTK---NSNMGFWDD
        : ::.  .:   ....     :...:.: :::.:. .. .:.. : .   .:..:.:.:
CCDS34 -PARAQAPNH---RVQL-----GGLGTAPLNQWVSE-AGPLWGGPDKSGGGSSGLGLWED
            800               810       820        830       840   

             1110       1120       1130       1140      1150       
pF1KSD AVKEVGP--RNSTNKN-KNNASLSKSVG-VSNRQ-NKKVEEEEKLLKLFQGVNKAQDGFT
       . :  :   :.   :: ... ::: : . .:.:   ::.:::::::::.::. . :::::
CCDS34 TPKSGGSLVRGLGLKNSRSSPSLSDSYSHLSGRPIRKKTEEEEKLLKLLQGIPRPQDGFT
           850       860       870       880       890       900   

      1160      1170      1180      1190      1200      1210       
pF1KSD QWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLGDTSEAKEFAKQFLERRA
       ::::::::.:.....::::  :..::::::::.::::::. :::: ::::::::::::::
CCDS34 QWCEQMLHTLSATGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRA
           910       920       930       940       950       960   

      1220      1230      1240      1250      1260      1270       
pF1KSD KQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTLHSVFQTNQSNNQQSNFE
       ::::.:::::::                      .: .. ..:...::.:.:    ... 
CCDS34 KQKASQQRQQQQ---------------------EAW-LSSASLQTAFQANHS----TKLG
           970                             980       990           

      1280      1290      1300      1310      1320
pF1KSD AVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY
         ...: :..  :...:::.::.:...::     ::::..:::
CCDS34 PGEGSKAKRRALMLHSDPSILGYSLHGSS-----GEIESVDDY
      1000      1010      1020           1030     




1320 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 18:35:10 2016 done: Thu Nov  3 18:35:11 2016
 Total Scan time:  6.070 Total Display time:  0.290

Function used was FASTA [36.3.4 Apr, 2011]
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