GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:27:01

Sequence gi568815590f:66329132_66530226 : 201095 bp : 42.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2407   2446   40                              -2.75
 1.01 Init +   7882   8079  198  0  0   73   47   136 0.510   6.95
 1.02 Intr +   9781   9885  105  0  0   45  100    77 0.686   4.09
 1.03 Term +  16231  16431  201  0  0   21   34   196 0.717   3.91
 1.04 PlyA +  16486  16491    6                               1.05

 2.09 PlyA -  17430  17425    6                               1.05
 2.08 Term -  22677  22519  159  0  0   69   42   111 0.297   1.56
 2.07 Intr -  39470  39361  110  0  2   79   62   122 0.210   7.78
 2.06 Intr -  49637  49463  175  2  1   96   28   186 0.825  11.99
 2.05 Intr -  52500  52320  181  2  1   -3   54   104 0.431  -3.15
 2.04 Intr -  53798  53661  138  1  0   48   93    64 0.661   1.56
 2.03 Intr -  56577  56446  132  2  0   13  101   155 0.855   8.14
 2.02 Intr -  57732  57707   26  0  2  112   77    12 0.515  -1.59
 2.01 Init -  62443  62378   66  1  0   85  119    27 0.761   6.62
 2.00 Prom -  69553  69514   40                              -6.45

 3.00 Prom +  70100  70139   40                              -8.85
 3.01 Init +  71786  71907  122  1  2   36   56   152 0.175   6.51
 3.02 Intr +  84470  84574  105  2  0   88   70    34 0.005   0.01
 3.03 Term +  99772 101098 1327  1  1   57   38  1426 0.767 124.53
 3.04 PlyA + 101571 101576    6                               1.05

 4.00 Prom + 102581 102620   40                              -6.65
 4.01 Init + 103386 103444   59  2  2  106   75   132 0.966  12.55
 4.02 Intr + 116087 116283  197  2  2   50  103   216 0.993  17.44
 4.03 Intr + 119734 119839  106  2  1   59  111   100 0.489   7.75
 4.04 Intr + 122822 122974  153  2  0   68   87   130 0.714   9.17
 4.05 Intr + 124928 125026   99  2  0   55   77   101 0.625   4.01
 4.06 Intr + 127686 127764   79  0  1   87   43    33 0.377  -2.67
 4.07 Intr + 127939 128035   97  0  1   83   51   113 0.909   5.76
 4.08 Intr + 131177 131334  158  0  2   80  110   276 0.476  27.81
 4.09 Term + 131465 131542   78  1  0   58   51    68 0.613  -3.12
 4.10 PlyA + 132835 132840    6                              -0.45

 5.05 PlyA - 133146 133141    6                              -0.45
 5.04 Term - 134803 134640  164  2  2  101   42    97 0.525   3.52
 5.03 Intr - 138109 137970  140  0  2   35   66   150 0.722   6.69
 5.02 Intr - 138938 138843   96  1  0  111   68    66 0.816   5.11
 5.01 Init - 143260 143139  122  1  2   70   51   143 0.466   8.52
 5.00 Prom - 147254 147215   40                              -3.95

 6.04 PlyA - 147302 147297    6                               1.05
 6.03 Term - 151084 150925  160  0  1   59   49   127 0.183   2.33
 6.02 Intr - 155468 155411   58  0  1   89   97    46 0.169   2.62
 6.01 Init - 163219 163153   67  1  1   60   96    23 0.172   1.59
 6.00 Prom - 163788 163749   40                              -6.85

 7.00 Prom + 169300 169339   40                              -5.75
 7.01 Init + 173147 173284  138  1  0   27   61   123 0.447   3.69
 7.02 Intr + 176244 176397  154  2  1   93  104   182 0.943  19.02
 7.03 Intr + 181999 182124  126  2  0  131   78    94 0.383  12.43
 7.04 Intr + 182996 183291  296  0  2  -14   44   181 0.135  -0.70
 7.05 Intr + 184339 184506  168  0  0   62  110   113 0.501  10.12
 7.06 Term + 186839 187015  177  1  0   21   47   188 0.528   4.70
 7.07 PlyA + 188376 188381    6                               1.05

 8.03 PlyA - 189201 189196    6                               1.05
 8.02 Term - 192590 192447  144  2  0   72   41   142 0.375   4.83
 8.01 Init - 196115 196053   63  2  0   66   96    50 0.724   4.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 115475 115617  143  1  2   76   61   117 0.851   7.45


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_1|167_aa
MAKATGQNENEHPMLQQELFNDYRRQRQGDKSRNSADGGWNKISLFLLTPIIFTQETNWG
KSGRHMGHNNSMIDTTSNPVLQMGKLEGTEQLNNLPKVTQPTLKSRDPFQLRREKDRMTE
GGAERGNKRKALPATRRKGPWAKDTGKGIETDSPPGPSELKVVLPTA

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_1|504_bp
atggctaaggccacaggtcagaatgaaaatgagcacccaatgttacagcaagagctcttt
aatgactaccgaagacaaagacagggagacaagtctagaaattctgctgatggaggctgg
aacaaaatatcgctgtttttactcacacccatcatcttcacccaggaaactaactgggga
aagtcagggagacacatgggacataacaactctatgatagatacaacttctaatcccgtt
ttacagatgggcaagctagaaggcactgagcagttaaataatttgcccaaggtcacacag
ccaacccttaaaagtagagaccctttccaactgcggagagagaaagacaggatgacagaa
ggaggtgcagagagaggcaacaagaggaaggctctgccagccacacggaggaaggggcca
tgggccaaggacactggaaaagggatagaaacagattctcccccggggccttcagaactg
aaagtagttctgccaacagcttga

>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_2|328_aa
MATDLLALCGPIHPEQGDVFYLRWSFAMLPRETSRGGGALEDLRVVMEVPTAMKLTTSCG
SNLDFELLIEQFFLWSRHEALPCFSSKNLCGCELLMANRASCGLLDREETEIRSDLWKYS
WRGKKQIWTERGAEDSAKLQVTPWGDLDCVKPILTVLQRAPKVRPLYLCCNQPSVWAVLG
MCILSCGCLREALSKTLYGITSLKKQVPAGAGAQAIAGGAPATATSATRTACIHYTDVTV
CAEEVQHSSVRELKIKDEEARGTVARSLDEVIPMPKDCFNSKIMKWAVFLLVTKTLHPVT
GKGSRSRPQERVLGSRARKNSGRVLSAK

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_2|987_bp
atggctactgatctcttagctctgtgtgggccaatacatcctgaacagggggatgtcttc
tatctgagatggagttttgccatgttgcccagagagacttcacggggtggaggagcattg
gaggatctcagggtagttatggaagtccccactgctatgaaactcaccacttcctgtggc
agcaacttagattttgagctcctcattgaacaattcttcctatggtcaagacatgaagca
ttaccctgtttctcatcaaagaatctctgtgggtgtgaactcctgatggcgaacagagcc
agctgtgggctccttgacagagaggagacagaaataagaagtgacttgtggaaatactcc
tggagaggaaagaagcagatttggacagagagaggagcagaagattcagcaaagcttcag
gtcactccgtggggagacctggattgtgtaaaacccattttaactgttctccagagagcc
ccaaaagtcagacctttatatctctgctgtaatcagccatctgtttgggctgtcctggga
atgtgcatcttgtcttgtggctgtttgagagaagccttgtcaaagaccctttatggaatc
acttccctgaagaaacaagttcctgcgggggcaggagctcaggccattgctggcggtgct
cctgccactgcgacatctgctacccgcacagcttgtattcattatactgatgtgacagtc
tgtgctgaagaagttcagcatagcagtgtaagagaattgaagattaaggatgaggaagca
agggggactgttgccaggtccctggatgaagtcatccctatgccaaaggattgctttaat
tcaaaaattatgaagtgggctgtgtttcttctggtgactaaaactcttcatcctgttacc
ggaaaggggtcccgatccagaccccaagagagggttcttggatctcgtgcaagaaagaat
tcagggcgagtcctcagtgcgaagtaa

>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_3|517_aa
MKKERIKDDSKFFGLAPWKNDVAIDKTGKTTDEADSEGGLWSKVVLHDRVLLDNNFGVFI
KTKYGVPFDPTILLLSLKVPLLIPSSLHTALCRPFLWSPGLRAASGRSGSEPFFSGLGIP
ASARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHK
ELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAI
VARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQR
ARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLH
PTGHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQ
LELLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPP
SQGGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_3|1554_bp
atgaaaaaagaaagaatcaaggatgactccaagttttttggcttggctccctggaaaaat
gatgttgccattgacaaaacagggaaaaccacagatgaagcggactcggagggaggatta
tggagtaaggtggtattgcatgatagggtccttttggataataattttggagtgttcatc
aaaactaaatatggagtaccctttgatcccactattctattactcagcctaaaggtcccg
cttctaatcccatcatctctccataccgccctctgccggcctttcctctggtcgcccgga
ttgcgagccgcttccggacgctccggaagcgaacctttcttttccggattgggcatcccg
gcatctgcacgtggttatgctgccggagtttgggccgccactgtaggaaaagtaacttca
gctgcagccccaaagcgagtgagccgagccggagccatggagggccagagcgtggaggag
ctgctcgcaaaggcagagcaggacgaggcagagaagttgcaacgcatcacggtgcacaag
gagctggagctgcagtttgacctgggcaacctgctggcgtcggaccggaaccccccgacc
gggctgcggtgcgccggacccacgccggaggccgagctacaggccctggcgcgggacaac
acgcaactgctcatcaaccagctgtggcagctgcccacggagcgcgtggaagaggcgata
gtggcgcggctgccggagcccaccacacgcctgccgcgagagaagcctctgccccgaccg
cggccacttacacgctggcagcagttcgcgcgcctcaagggcatccgtcccaagaagaag
accaacctggtgtgggacgaggtgagtggccagtggcggcggcgctggggctaccagcgc
gcccgggacgacaccaaagaatggctgattgaggtgcccggcaatgccgaccccttggag
gaccagttcgccaagcggattcaggccaagaaggaaagggtggccaagaacgagctgaac
cggctgcgtaacctggcccgcgcgcacaagatgcagctgcccagcgcggccggcttgcac
cctaccggacaccagagtaaggaggagctgggccgcgccatgcaagtggccaaggtctcc
accgcctctgtggggcgctttcaggagcgcctccccaaggagaaggtgccccggggctcc
ggcaagaaaaggaagtttcaaccccttttcggggactttgcagccgagaaaaagaaccag
ttggagctgcttcgtgtcatgaacagcaagaagcctcagctggatgtgactagggccacc
aataagcagatgagggaggaggaccaggaggaggccgccaagaggaggaaaatgagccag
aagggcaagagaaagggaggccggcaggggcctgggggcaagaggaaagggggcccgccc
agccagggagggaagaggaaagggggcttgggaggcaagatgaattctgggccgcctggc
ttgggtggcaagagaaaaggaggacagcgcccaggaggaaagaggaggaagtaa

>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_4|341_aa
MAAAARARVAYLLRQLQRAAFMEAIEFAQKGAFDAYVAVGGGSTMDTCKAANLYASSPHS
DFLDYVSAPIGKGKPVSVPLKPLIAGITSRAIKPTLGLIDPLHTLHMPARVVANSGFDVL
CHALESYTTLPYHLRSPCPSNPITRPAYQGSNPISDIWAIHALRIVAKYLKRAVRNPDDL
EARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNVDHPLVPHGLSVVLT
SPAVFTFTAQMFPERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGLAAVG
YSKADIPALVKGTLPQQTAVLSFPGATGPGPRLSVHPYSCS

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_4|1026_bp
atggccgctgccgcccgagcccgggtcgcgtacttgctgaggcaactgcaacgcgcagcc
ttcatggaagctattgagtttgcccaaaagggagcttttgatgcctatgttgctgtcggt
ggtggctctaccatggacacctgtaaggctgctaatctgtatgcatccagccctcattct
gatttcctagattatgtcagtgcccccattggcaagggaaagcctgtgtctgtgcctctt
aagcctctgattgcaggcatcacttcgagagccatcaaacccacactgggactgattgat
cctctgcacaccctccacatgcctgcccgagtggtcgccaacagtggctttgatgtgctt
tgccatgccctggagtcatacaccaccctgccctaccacctgcggagcccctgcccttca
aatcccatcacacggcctgcgtaccagggcagcaacccaatcagtgacatttgggctatc
cacgcgctgcggatcgtggctaagtatctgaagagggctgtcagaaatcccgatgatctt
gaagcaaggtctcatatgcacttggcaagtgcttttgctggcatcggctttggaaatgct
ggtgttcatctgtgccatggaatgtcttacccaatttcaggtttagtgaagatgtataaa
gcaaaggattacaatgtggatcacccactggtgccccatggcctttctgtggtgctcacg
tccccagcggtgttcactttcacggcccagatgtttccagagcgacacctggagatggca
gaaatactgggagccgacacccgcactgccaggatccaagatgcagggctggtgttggca
gacacgctccggaaattcttattcgatctggatgttgatgatggcctagcagctgttggt
tactccaaagctgatatccccgcactagtgaaaggaacgctgccccagcagacagcagtt
ctgtcctttcctggtgcaacagggccaggccctcgcctttctgttcatccatacagctgt
agctga

>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_5|173_aa
MAWSPQQLPEDQALTGRARAAVWSGVAGRQRLAACATMTWRAFESHCPLPYALATAFCRN
QSWGKHPYHDKTSSTHQQECQSYFQNEAPVRALLTSCGTTTGIQDTAITRLSSLRSFLKA
WLWQLKASVHRAAISCHQYGLCLVKNTGLVVSSRENQSFTAEQKRTFIKCQLH

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_5|522_bp
atggcctggtcccctcaacagctcccggaggaccaggcacttactggcagagcccgggca
gctgtctggagtggtgttgcgggtcgtcagagactcgcagcctgtgcaacgatgacctgg
agagctttcgaaagccactgccccttgccttacgccctggcaacagccttctgccgaaac
caatcttggggaaaacacccttatcatgacaaaactagttcaactcatcagcaggagtgt
cagtcctacttccaaaatgaagccccagtcagagcgcttctcacctcctgtggtaccaca
accggaatccaggacactgctatcactcgcctgtccagcttgagaagcttcctgaaagcc
tggctatggcagttgaaagcctctgtacacagggctgctattagctgccaccagtatggg
ctgtgtttggtcaagaatactggcctggttgtttcttccagagaaaaccaatccttcact
gctgaacagaaaagaaccttcatcaaatgtcaactacattga

>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_6|94_aa
MHQIYSCSDENIEVFTTVIPSKGCVAASLAFILRETGDKQDNPERTQQMGNFMATNGIVY
PLIVPVSAIKLNPLPTNKKISLLPVQLWKGPKLC

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_6|285_bp
atgcatcagatttacagctgcagtgacgagaacatagaagttttcaccaccgtgattcct
tccaagggatgtgtagcagcatccctggcctttatcttgagggagacaggtgataaacaa
gataatcctgaacgcactcaacagatgggaaatttcatggccacaaatggaattgtttat
cctctcattgttcccgtgtcagcaatcaaactaaatccattacccaccaataaaaagatc
agcctgctgccagttcagctgtggaaggggccaaagctatgttga

>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_7|352_aa
MSQLSLLAWSHDNEDSWPLQNKQAVSHQKRWINEIAKVTFFSDFKLVVIESDLYTHQPLE
LLPHRGDRRDPGDRRRFGRLQTARPPTAHPAKASARPAGQLSFLEGDGVAHFQAYQYISL
ISGQECRVPSWLAESAVAGGLEIVGLGSHSLSEICDTSMGEQSRAHTAKSKSVQSVLGEI
GLRKGEKSGNKSFHPEIRGCKCSPAHGIMGRKRLHGPQGGTAALPTVGQLGMGGGVKKTA
SVRARVGRQMHPHTPSRFLMTDTASAPDLSENFSLCLIGGDSHGHREGSCSDERAVLPAA
SPASSGKCGQGTRRSLNMWEPPTAPLRPTKGDPLQVPCVGQGSPDKRKNLQD

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_7|1059_bp
atgagtcagttaagccttctggcatggagccacgacaatgaagattcgtggccccttcag
aataagcaggcggtcagccatcagaaaagatggataaatgagattgcaaaggtcacattc
ttctcagatttcaagcttgtggtgatcgagtcggacctgtacacgcaccagcccctggag
ctgctgccccaccgcggagaccgcagggaccctggcgaccgccgcaggtttgggcggctc
cagaccgcgcggccgcccacagcccacccggccaaagcctctgccagacccgctgggcag
ctgtccttccttgaaggggatggggtggcacattttcaggcctatcagtacatctccctc
atctctgggcaggaatgtcgggttccctcttggttagcagagtcagcagtggctggaggc
ctggagatagtggggctagggtctcacagcttatcagaaatctgtgacaccagcatggga
gagcaatccagggcccacacagctaaatccaagtccgtgcaaagtgtgctgggtgagatt
ggcctaaggaaaggggaaaagagtgggaacaagtcctttcacccagagataagggggtgc
aagtgttcaccggcccatggcataatgggaaggaagcgtttgcacggaccacaaggtggc
acagcagctctgcccacagtcggccagcttgggatgggaggaggggtgaagaagacagcc
tcagtcagggccagagtgggaaggcagatgcatcctcacactccctcccgcttcctcatg
acagataccgccagtgccccggatctcagtgaaaacttcagcctctgcctcattggaggc
gacagccatgggcacagagaagggagctgttctgatgagagggcagtgcttcctgcggcg
tccccggcatcctccggaaaatgtggacaaggcacaagaagaagtctgaatatgtgggag
ccaccaacagcgcctttgaggccgactaaaggtgaccctcttcaagtgccctgtgttggc
caaggttccccggacaagaggaaaaaccttcaggattga

>gi568815590f:66329132_66530226|GENSCAN_predicted_peptide_8|68_aa
MGKIFVAFVLSQERPKTIQEQGPLSHPSTLSWVSVVSVAGEWDSAAPPVGPISLLLHGGH
LLPGSIAP

>gi568815590f:66329132_66530226|GENSCAN_predicted_CDS_8|207_bp
atggggaaaatatttgtggcctttgtcctgagtcaagagagacctaaaacaattcaagag
cagggtccattgtcccacccgtctacactgtcctgggtgtccgtggtgtccgtggctggc
gagtgggactctgcagcaccacctgtggggcccatttcccttcttcttcatggaggacat
ctgcttccagggagtattgcaccttga