Result of FASTA (omim) for pF1KB9359
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9359, 292 aa
  1>>>pF1KB9359 292 - 292 aa - 292 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6273+/-0.000309; mu= 14.8443+/- 0.019
 mean_var=80.6706+/-16.084, 0's: 0 Z-trim(118.6): 49  B-trim: 797 in 2/55
 Lambda= 0.142796
 statistics sampled from 31609 (31660) to 31609 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.371), width:  16
 Scan time:  8.200

The best scores are:                                      opt bits E(85289)
NP_001751 (OMIM: 123834) G1/S-specific cyclin-D3 i ( 292) 1949 410.5 1.9e-114
NP_001274356 (OMIM: 123834) G1/S-specific cyclin-D ( 242) 1481 314.1 1.7e-85
NP_001129489 (OMIM: 123834) G1/S-specific cyclin-D ( 211) 1373 291.8 7.8e-79
XP_011513273 (OMIM: 123834) PREDICTED: G1/S-specif ( 276) 1304 277.6 1.8e-74
NP_001750 (OMIM: 123833,615938) G1/S-specific cycl ( 289) 1173 250.7 2.5e-66
NP_001129597 (OMIM: 123834) G1/S-specific cyclin-D ( 220) 1004 215.8 6.2e-56
NP_444284 (OMIM: 168461,193300,254500) G1/S-specif ( 295)  992 213.4 4.3e-55
XP_011513274 (OMIM: 123834) PREDICTED: G1/S-specif ( 195)  728 158.9 7.3e-39
NP_001274363 (OMIM: 123834) G1/S-specific cyclin-D (  96)  613 135.0 5.6e-32
NP_001129598 (OMIM: 123834) G1/S-specific cyclin-D (  96)  613 135.0 5.6e-32
XP_011533596 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421)  349 81.0 4.3e-15
NP_001104517 (OMIM: 604036) cyclin-A1 isoform c [H ( 421)  349 81.0 4.3e-15
XP_011533598 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421)  349 81.0 4.3e-15
XP_011533597 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421)  349 81.0 4.3e-15
NP_001104516 (OMIM: 604036) cyclin-A1 isoform c [H ( 421)  349 81.0 4.3e-15
NP_001104515 (OMIM: 604036) cyclin-A1 isoform b [H ( 464)  349 81.0 4.7e-15
NP_003905 (OMIM: 604036) cyclin-A1 isoform a [Homo ( 465)  349 81.0 4.7e-15
NP_001228 (OMIM: 123835) cyclin-A2 [Homo sapiens]  ( 432)  327 76.5   1e-13
XP_016869448 (OMIM: 603775) PREDICTED: G1/S-specif ( 404)  306 72.1 1.9e-12
XP_016869447 (OMIM: 603775) PREDICTED: G1/S-specif ( 404)  306 72.1 1.9e-12
NP_477097 (OMIM: 603775) G1/S-specific cyclin-E2 [ ( 404)  306 72.1 1.9e-12
XP_016869446 (OMIM: 603775) PREDICTED: G1/S-specif ( 404)  306 72.1 1.9e-12
XP_011515668 (OMIM: 603775) PREDICTED: G1/S-specif ( 288)  297 70.2 5.3e-12
NP_001309191 (OMIM: 123837) G1/S-specific cyclin-E ( 395)  285 67.8 3.8e-11
XP_011525742 (OMIM: 123837) PREDICTED: G1/S-specif ( 407)  285 67.8 3.9e-11
NP_001229 (OMIM: 123837) G1/S-specific cyclin-E1 i ( 410)  285 67.8 3.9e-11
NP_114172 (OMIM: 123836) G2/mitotic-specific cycli ( 433)  284 67.6 4.7e-11
NP_004692 (OMIM: 602755) G2/mitotic-specific cycli ( 398)  269 64.5 3.8e-10
NP_001309188 (OMIM: 123837) G1/S-specific cyclin-E ( 365)  236 57.7 3.9e-08
NP_066970 (OMIM: 607752,615872) cyclin-O [Homo sap ( 350)  211 52.5 1.3e-06
NP_954854 (OMIM: 601578) cyclin-G1 [Homo sapiens]  ( 295)  181 46.3 8.5e-05
NP_004051 (OMIM: 601578) cyclin-G1 [Homo sapiens]  ( 295)  181 46.3 8.5e-05
NP_149020 (OMIM: 300456) G2/mitotic-specific cycli (1395)  183 47.1 0.00022
XP_016885407 (OMIM: 300456) PREDICTED: G2/mitotic- (1395)  183 47.1 0.00022
XP_016885406 (OMIM: 300456) PREDICTED: G2/mitotic- (1396)  183 47.1 0.00022
XP_016885405 (OMIM: 300456) PREDICTED: G2/mitotic- (1403)  177 45.9 0.00053
XP_016885403 (OMIM: 300456) PREDICTED: G2/mitotic- (1404)  177 45.9 0.00053
XP_016885404 (OMIM: 300456) PREDICTED: G2/mitotic- (1404)  177 45.9 0.00053
XP_016885402 (OMIM: 300456) PREDICTED: G2/mitotic- (1404)  177 45.9 0.00053
NP_004345 (OMIM: 603203) cyclin-G2 [Homo sapiens]  ( 344)  158 41.6  0.0026
XP_011530700 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344)  158 41.6  0.0026
XP_011530701 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344)  158 41.6  0.0026


>>NP_001751 (OMIM: 123834) G1/S-specific cyclin-D3 isofo  (292 aa)
 initn: 1949 init1: 1949 opt: 1949  Z-score: 2175.6  bits: 410.5 E(85289): 1.9e-114
Smith-Waterman score: 1949; 99.7% identity (100.0% similar) in 292 aa overlap (1-292:1-292)

               10        20        30        40        50        60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
              190       200       210       220       230       240

              250       260       270       280       290  
pF1KB9 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
       ::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
              250       260       270       280       290  

>>NP_001274356 (OMIM: 123834) G1/S-specific cyclin-D3 is  (242 aa)
 initn: 1481 init1: 1481 opt: 1481  Z-score: 1655.7  bits: 314.1 E(85289): 1.7e-85
Smith-Waterman score: 1481; 99.6% identity (100.0% similar) in 226 aa overlap (67-292:17-242)

         40        50        60        70        80        90      
pF1KB9 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK
                                     ::::::::::::::::::::::::::::::
NP_001               MKSAGGSGRSLLPSPRVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK
                             10        20        30        40      

        100       110       120       130       140       150      
pF1KB9 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI
         50        60        70        80        90       100      

        160       170       180       190       200       210      
pF1KB9 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG
        110       120       130       140       150       160      

        220       230       240       250       260       270      
pF1KB9 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ
       ::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
NP_001 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQ
        170       180       190       200       210       220      

        280       290  
pF1KB9 GPSQTSTPTDVTAIHL
       ::::::::::::::::
NP_001 GPSQTSTPTDVTAIHL
        230       240  

>>NP_001129489 (OMIM: 123834) G1/S-specific cyclin-D3 is  (211 aa)
 initn: 1373 init1: 1373 opt: 1373  Z-score: 1536.3  bits: 291.8 E(85289): 7.8e-79
Smith-Waterman score: 1373; 99.5% identity (100.0% similar) in 211 aa overlap (82-292:1-211)

              60        70        80        90       100       110 
pF1KB9 IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
                                     ::::::::::::::::::::::::::::::
NP_001                               MNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
                                             10        20        30

             120       130       140       150       160       170 
pF1KB9 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
               40        50        60        70        80        90

             180       190       200       210       220       230 
pF1KB9 RDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAG
              100       110       120       130       140       150

             240       250       260       270       280       290 
pF1KB9 ITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIH
       :::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
NP_001 ITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIH
              160       170       180       190       200       210

        
pF1KB9 L
       :
NP_001 L
        

>>XP_011513273 (OMIM: 123834) PREDICTED: G1/S-specific c  (276 aa)
 initn: 1302 init1: 1302 opt: 1304  Z-score: 1457.8  bits: 277.6 E(85289): 1.8e-74
Smith-Waterman score: 1310; 75.5% identity (80.6% similar) in 278 aa overlap (1-278:1-268)

               10        20        30        40        50        60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
       :::::::::::       : ..  .:.  . .::    :.: :.:     .  : .    
XP_011 HAQTFLALCATGL-----PAGL--SGADRSCTQGEPQGSLS-DQLQPSAQSPPGLQQP--
              190              200       210        220       230  

              250       260       270       280       290  
pF1KB9 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
       ::  .:     .     : .  :. : :  ::     :              
XP_011 RAQPDQHSYRCHSHTPVALERPSGVATKQRRGRCHPPPCLQEPHHI      
              240       250       260       270            

>>NP_001750 (OMIM: 123833,615938) G1/S-specific cyclin-D  (289 aa)
 initn: 1170 init1: 977 opt: 1173  Z-score: 1311.7  bits: 250.7 E(85289): 2.5e-66
Smith-Waterman score: 1173; 61.6% identity (81.8% similar) in 297 aa overlap (1-292:1-289)

               10        20        30        40        50        60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
       ::::: : .  . ::  :  :: :.::::.:: .::::.:. :::.:::..:.:.::.:.
NP_001 MELLCHE-VDPVRRAVRDRNLLRDDRVLQNLLTIEERYLPQCSYFKCVQKDIQPYMRRMV
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
       : :::::::::.:::::::::::::::.:. ::: :..:::::::::.:::::.::.:::
NP_001 ATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCMFLASKLKETSPLT
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
        ::::::::....:..: .::..:::::::.::::  :::.  ::..:   :.. .:..:
NP_001 AEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRK
     120       130       140       150       160       170         

              190       200       210           220       230      
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG----ACSMSGDELTELLAGITGTE
       :::::.::::::. :::::::::::::.:::. ::     . :.. : :::::: ::.:.
NP_001 HAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEVSSLTCDALTELLAKITNTD
     180       190       200       210       220       230         

        240       250       260       270        280       290  
pF1KB9 VDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGP-SQTSTPTDVTAIHL
       ::::.::::::::.: .::..  : . .       ::.:.   .:.::::::  : :
NP_001 VDCLKACQEQIEAVLLNSLQQYRQDQRD-------GSKSEDELDQASTPTDVRDIDL
     240       250       260              270       280         

>>NP_001129597 (OMIM: 123834) G1/S-specific cyclin-D3 is  (220 aa)
 initn: 1004 init1: 1004 opt: 1004  Z-score: 1125.2  bits: 215.8 E(85289): 6.2e-56
Smith-Waterman score: 1313; 75.0% identity (75.3% similar) in 292 aa overlap (1-292:1-220)

               10        20        30        40        50        60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
       ::::::                                                      
NP_001 AYWMLE------------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
                         ::::::::::::::::::::::::::::::::::::::::::
NP_001 ------------------DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
                           70        80        90       100        

              190       200       210       220       230       240
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
      110       120       130       140       150       160        

              250       260       270       280       290  
pF1KB9 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
       ::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
      170       180       190       200       210       220

>>NP_444284 (OMIM: 168461,193300,254500) G1/S-specific c  (295 aa)
 initn: 992 init1: 809 opt: 992  Z-score: 1110.0  bits: 213.4 E(85289): 4.3e-55
Smith-Waterman score: 992; 51.9% identity (75.6% similar) in 295 aa overlap (2-292:4-295)

                 10        20        30        40        50        
pF1KB9   MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRK
          .::::: ..   :: ::  ::.: :::...:. ::  .: .:::.:::.:. : :::
NP_444 MEHQLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRK
                10        20         30        40        50        

       60        70        80        90       100       110        
pF1KB9 MLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTP
       ..: :::::::::.:::::::::::::::.::  :..:..::::::.::..:::..:: :
NP_444 IVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIP
       60        70        80        90       100       110        

      120       130       140       150       160       170        
pF1KB9 LTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALV
       :: ::::::::... :..: . :.:...::::.:::.  :::.  .: ..   .. . ..
NP_444 LTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQII
      120       130       140       150       160       170        

      180       190       200       210           220       230    
pF1KB9 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITG
       .::::::.::::::  :   ::::.:.::. ::::::.  :    .:  .::..:. .  
NP_444 RKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIK
      180       190       200       210       220       230        

          240       250       260       270       280       290  
pF1KB9 TEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
        . :::::::::::: :. :::.: : . .:     .    .  . . :::::  . .
NP_444 CDPDCLRACQEQIEALLESSLRQA-QQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
      240       250       260        270       280       290     

>>XP_011513274 (OMIM: 123834) PREDICTED: G1/S-specific c  (195 aa)
 initn: 726 init1: 726 opt: 728  Z-score: 818.7  bits: 158.9 E(85289): 7.3e-39
Smith-Waterman score: 734; 65.5% identity (72.6% similar) in 197 aa overlap (82-278:1-187)

              60        70        80        90       100       110 
pF1KB9 IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
                                     ::::::::::::::::::::::::::::::
XP_011                               MNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
                                             10        20        30

             120       130       140       150       160       170 
pF1KB9 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
               40        50        60        70        80        90

             180       190       200       210       220       230 
pF1KB9 RDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAG
       ::::::::::::::::::::       : ..  .:.  . .::    :.: :.:     .
XP_011 RDRQALVKKHAQTFLALCATGL-----PAGL--SGADRSCTQGEPQGSLS-DQLQPSAQS
              100       110              120       130        140  

             240       250       260       270       280       290 
pF1KB9 ITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIH
         : .    ::  .:     .     : .  :. : :  ::     :             
XP_011 PPGLQQP--RAQPDQHSYRCHSHTPVALERPSGVATKQRRGRCHPPPCLQEPHHI     
              150       160       170       180       190          

        
pF1KB9 L

>>NP_001274363 (OMIM: 123834) G1/S-specific cyclin-D3 is  (96 aa)
 initn: 613 init1: 613 opt: 613  Z-score: 695.1  bits: 135.0 E(85289): 5.6e-32
Smith-Waterman score: 613; 99.0% identity (100.0% similar) in 96 aa overlap (197-292:1-96)

        170       180       190       200       210       220      
pF1KB9 RLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELT
                                     ::::::::::::::::::::::::::::::
NP_001                               MYPPSMIATGSIGAAVQGLGACSMSGDELT
                                             10        20        30

        230       240       250       260       270       280      
pF1KB9 ELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTD
       ::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
NP_001 ELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTD
               40        50        60        70        80        90

        290  
pF1KB9 VTAIHL
       ::::::
NP_001 VTAIHL
             

>>NP_001129598 (OMIM: 123834) G1/S-specific cyclin-D3 is  (96 aa)
 initn: 613 init1: 613 opt: 613  Z-score: 695.1  bits: 135.0 E(85289): 5.6e-32
Smith-Waterman score: 613; 99.0% identity (100.0% similar) in 96 aa overlap (197-292:1-96)

        170       180       190       200       210       220      
pF1KB9 RLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELT
                                     ::::::::::::::::::::::::::::::
NP_001                               MYPPSMIATGSIGAAVQGLGACSMSGDELT
                                             10        20        30

        230       240       250       260       270       280      
pF1KB9 ELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTD
       ::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
NP_001 ELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTD
               40        50        60        70        80        90

        290  
pF1KB9 VTAIHL
       ::::::
NP_001 VTAIHL
             




292 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 18:22:56 2016 done: Thu Nov  3 18:22:58 2016
 Total Scan time:  8.200 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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