GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:54:05

Sequence gi568815590f:125330903_125536468 : 205566 bp : 47.15% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8807   8854   48  1  0  128   97   -18 0.407   1.98
 1.02 Intr +  10725  10794   70  2  1   50   35    89 0.021  -1.45
 1.03 Intr +  26317  26417  101  2  2   96   81    82 0.688   8.13
 1.04 Intr +  26810  26916  107  1  2   45   75   177 0.640  11.11
 1.05 Term +  35866  35983  118  1  1  108   49   104 0.696   6.51
 1.06 PlyA +  36197  36202    6                               1.05

 2.00 Prom +  37736  37775   40                              -5.16
 2.01 Init +  46553  46697  145  1  1   40  105    77 0.422   4.88
 2.02 Intr +  51115  51200   86  2  2   30   81    90 0.165   2.04
 2.03 Intr +  65670  65770  101  2  2  116   72    54 0.185   5.51
 2.04 Term +  74074  74239  166  1  1  111   39   103 0.435   5.09
 2.05 PlyA +  75365  75370    6                               1.05

 3.00 Prom +  81629  81668   40                              -4.16
 3.01 Init + 100028 100360  333  1  0   68  102   584 0.646  53.10
 3.02 Intr + 102415 102707  293  0  2  136   83   428 0.998  43.03
 3.03 Term + 105104 105569  466  2  1  110   36   385 0.989  29.99
 3.04 PlyA + 105885 105890    6                               1.05

 4.00 Prom + 110174 110213   40                              -4.06
 4.01 Init + 121113 121191   79  2  1   61   44    99 0.733   4.02
 4.02 Intr + 122166 122374  209  1  2   66   94    80 0.402   5.20
 4.03 Term + 127762 127857   96  0  0   75   46    73 0.659  -0.23
 4.04 PlyA + 129611 129616    6                               1.05

 5.04 PlyA - 130657 130652    6                               1.05
 5.03 Term - 141258 141065  194  1  2   19   47   168 0.007   3.38
 5.02 Intr - 160473 160365  109  0  1   71   94    54 0.743   4.16
 5.01 Init - 161272 161180   93  1  0   64   19   194 0.538   9.75
 5.00 Prom - 162241 162202   40                              -2.46

 6.09 PlyA - 165724 165719    6                               1.05
 6.08 Term - 172540 172530   11  2  2  107   45     4 0.149  -3.64
 6.07 Intr - 176548 176467   82  1  1   36   94    86 0.305   3.21
 6.06 Intr - 177344 177197  148  1  1   79   25    72 0.314   0.24
 6.05 Intr - 178362 178299   64  1  1  138   69    25 0.498   3.38
 6.04 Intr - 185635 185573   63  2  0   30  110    50 0.034   0.09
 6.03 Intr - 190194 190030  165  1  0  115   31    70 0.022   3.93
 6.02 Intr - 200242 200206   37  1  1   97   94    23 0.445   1.64
 6.01 Init - 202039 201959   81  1  0   82  116    30 0.751   6.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 145983 145909   75  0  0   79   41    98 0.807   2.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:125330903_125536468|GENSCAN_predicted_peptide_1|147_aa
DSSHCHCASSHFKKSLYPNDTEKKKVIAYRKFDTYPPIYGGLQADREADGTEGVDEDIIV
TQSQTNFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDI
RKSDLIQDEALRRAIENHNKKRHRHSE

>gi568815590f:125330903_125536468|GENSCAN_predicted_CDS_1|444_bp
gattcctcccactgtcactgtgcctccagtcattttaagaagtccttgtatcctaatgat
acagagaagaagaaagtgatagcctacaggaaatttgacacctatcccccaatttatggt
ggtcttcaagctgacagagaagctgacggaacagaaggagtggatgaagatataattgtg
acccaaagtcagaccaacttcacctgccccattacaaaggaggaaatgaagaagccagtg
aaaaataaagtgtgtggccacacctatgaagaggacgccattgttcgcatgattgagtcc
aggcaaaagcggaagaaaaaggcctattgccctcaaattggctgtagccacacggatata
agaaagtcagatcttatccaggatgaagcacttagaagggcaattgagaaccataacaag
aaaagacatcgtcattccgagtag

>gi568815590f:125330903_125536468|GENSCAN_predicted_peptide_2|165_aa
MKGSNSRIIFCHKHHSAVKKRVRMLLECMEKAAVQSGRQAMRLCVRPRVHKSSQQLWVQM
KKLMPKEDQVLPKIPEPGPIEQSRESAGKLSLCPQRCSCDPGDESLWPQMGQGGALPSWL
RKDTSYSPTHVCASTRELPPSTAFLFRSYSHGFLCWVNDNGPQPT

>gi568815590f:125330903_125536468|GENSCAN_predicted_CDS_2|498_bp
atgaaaggaagcaactcaaggatcatcttttgtcacaaacaccacagtgctgttaagaaa
cgagtccgcatgctgctggaatgtatggaaaaggctgccgtgcagtcaggaagacaggcc
atgaggctctgcgtgaggcccagagtccataaatcctcccaacagctgtgggtgcagatg
aagaaactgatgcccaaagaagatcaagtcttgcccaagatccctgagccaggccccata
gagcagagccgagagagtgccggcaagctctcactttgcccccagcgctgctcctgtgat
cctggagatgaaagcttgtggccccaaatgggacaaggtggagctctgccctcctggctc
cggaaagacacctcatattccccaacccacgtctgtgcctctacccgggaactgccccct
tcaacagcctttctgttccgcagttactcacacggattcctgtgctgggtgaacgacaat
gggccacaacccacctag

>gi568815590f:125330903_125536468|GENSCAN_predicted_peptide_3|363_aa
MSGASQPRGPALLFPATRGVPAKRLLDADDAAAVAAKCPRLSECSSPPDYLSPPGSPCSP
QPPPAAPGAGGGSGSAPGPSRIADYLLLPLAEREHVSRALCIHTGRELRCKVFPIKHYQD
KIRPYIQLPSHSNITGIVEVILGETKAYVFFEKDFGDMHSYVRSRKRLREEEAARLFKQI
VSAVAHCHQSAIVLGDLKLRKFVFSTEERTQLRLESLEDTHIMKGEDDALSDKHGCPAYV
SPEILNTTGTYSGKAADVWSLGVMLYTLLVGRYPFHDSDPSALFSKIRRGQFCIPEHISP
KARCLIRSLLRREPSERLTAPEILLHPWFESVLEPGYIDSEIGTSDQIVPEYQEDSDISS
FFC

>gi568815590f:125330903_125536468|GENSCAN_predicted_CDS_3|1092_bp
atgagcggcgcctcgcagccccgcggcccggccctgctcttcccagccacccgaggcgtc
ccggccaaacgcctgctggacgccgacgacgcggcggctgtggcggccaagtgcccgcgc
ctctccgagtgctccagccccccggactacctcagcccccccggctcgccctgcagcccg
cagcccccgcctgccgctccgggggccggcggaggctccgggagcgcgccggggcccagc
cgcatcgccgactacctgctgctgcccctagccgagcgcgagcatgtgtcccgggcgctg
tgcatccacactggacgcgagctgcgctgcaaggtgtttcccattaaacactaccaggac
aaaatcaggccttacatccagctgccatcgcacagcaacattactggcattgtggaagtg
atccttggggaaaccaaggcctatgtcttctttgagaaggactttggggacatgcactcc
tatgtgcgaagccggaagaggctgcgggaagaggaagccgcccggctcttcaagcagatt
gtctccgccgtcgcccactgccaccagtcagccatcgtgctgggggacctgaagcttagg
aagttcgtcttctccacggaggagagaacccagcttagactagaaagtctagaagacaca
cacataatgaagggggaagatgatgctttgtcagacaaacatggctgcccagcctacgtg
agccctgagatcctcaacaccactgggacctactccggaaaggctgcggacgtttggagc
ctgggggtgatgctctacacccttctggttggacgataccccttccatgactcagacccc
agtgcccttttctccaaaattcggcgtggacagttctgcattcctgagcacatttccccc
aaagccaggtgcctcattcgcagcctcttgagacgggagccctccgagagactcactgcc
cccgagatcctactgcacccctggtttgagtccgtcttggaacccgggtacatcgactca
gaaataggaacttcagaccagattgttccagagtaccaggaggacagtgacattagttcc
ttcttctgctaa

>gi568815590f:125330903_125536468|GENSCAN_predicted_peptide_4|127_aa
MVANSEHLRDETTNPKTARRSAREVPVEDVTSTCIECGKKLTFTEGLCCLRHCPQSSDIV
GFILTATLQEWDGHPHSLCGNWNSERLSNLPIVAQLPAMPSETGCTVQLGSRVTMGEQNS
SQPVVDM

>gi568815590f:125330903_125536468|GENSCAN_predicted_CDS_4|384_bp
atggtagccaacagcgagcacctccgtgatgaaaccaccaacccgaaaacagcacgcagg
tcggccagggaggtgcctgtggaagatgtgacttcaacatgtattgaatgtggaaagaag
ctaaccttcaccgagggcctctgctgcctcagacactgtccacagtcttcagatattgtc
ggatttattctcacagcaactctgcaagagtgggatgggcatcctcattccttatgtgga
aattggaactcagagaggttaagtaacttacccatagttgcacagctaccagcaatgccc
tcagaaacaggctgcactgttcaattgggctccagagtgacgatgggtgaacagaacagc
agtcaacctgtggtggacatgtag

>gi568815590f:125330903_125536468|GENSCAN_predicted_peptide_5|131_aa
MVVVMMVMVMVVVVVVVVTVVVTQIFAKREGTQGPQNGYCHKCKQKMLRTVGASGHLQNE
ASKDQQAEMDTQRSLGGISLAVITMKLAMKLNGKDILVTLVFIMDIKANNTRSKRLRRSP
TTLTGQSPYSD

>gi568815590f:125330903_125536468|GENSCAN_predicted_CDS_5|396_bp
atggtggtggtgatgatggtgatggtgatggtggtggtggtggtggtggtggtgacggtg
gttgtaactcagatcttcgccaagagggaagggacccaagggccacagaacggatattgt
cacaaatgcaaacagaagatgctgaggacagttggagcctcgggtcacctacaaaatgag
gcttccaaagaccaacaggcagaaatggacacacagaggtccctaggaggaataagctta
gccgttattaccatgaagttggccatgaagctcaatggcaaggacatactggtcacatta
gtgttcatcatggacatcaaggccaacaacaccagatcaaagaggctacgaaggagccct
acgaccttgactggccaaagcccatactctgattag

>gi568815590f:125330903_125536468|GENSCAN_predicted_peptide_6|216_aa
MGKTCPHDSGISHWIPLTKHGNYGSYKCPERAGILTHLTGKAGNRESDGGDRWKSTMAGG
ITEVVIRCQDLMSVQGCGFKDEMQADIQPIRTCKGSSLEDLSLSDPNKAITDTVAGSNQN
THTTTITTILAKVLAAKSKEYHVQDCLNSMSTLDTFCKSGLLNHLIFIIAFDIFVRPHDI
QLWIQKSVISPLSADCLPGLGDANEKNTRLCPPGPL

>gi568815590f:125330903_125536468|GENSCAN_predicted_CDS_6|651_bp
atggggaagacctgcccccatgattcaggcatctcccactggatccctctcacaaaacat
gggaattatgggagctacaagtgtcctgaaagagctggcatccttacccacttgacaggc
aaagctggcaatagagaatctgatgggggtgatcgttggaaatctacaatggcaggtggc
atcacggaggttgtgatcagatgccaagacctcatgtcggttcagggatgtggatttaag
gatgagatgcaggctgatattcaaccaatacgcacctgtaaaggctcatctctggaagac
ctctcactgagtgacccaaataaggcaattacagacactgtggcaggctcaaaccagaac
acacacaccaccaccatcaccaccatcttggccaaggtcttagccgcaaagagtaaggag
taccacgtgcaggactgcctcaactcaatgtccacactggatactttctgtaaaagtggt
ttattgaatcatctcatcttcataattgcatttgatatctttgttaggccacacgacata
caactttggattcagaaatcagtcatcagcccgctaagcgccgactgtctgccaggcctt
ggggatgccaacgagaaaaacacaaggctctgtcctccaggacccttgtga