GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:51:30

Sequence gi568815584f:61620382_61847082 : 226701 bp : 39.66% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  15771  15937  167  1  2   22   37   365 0.541  21.90
 1.02 PlyA +  16185  16190    6                               1.05

 2.03 PlyA -  17719  17714    6                               1.05
 2.02 Term -  24610  24563   48  1  0  106   53    59 0.487   0.53
 2.01 Init -  31995  31915   81  0  0   64  119    90 0.970  10.72
 2.00 Prom -  32054  32015   40                              -6.15

 3.00 Prom +  37824  37863   40                              -3.65
 3.01 Init +  48831  48891   61  2  1   56  105    75 0.879   7.46
 3.02 Intr +  50321  50448  128  0  2    5   89   107 0.710   1.98
 3.03 Intr +  58808  58875   68  1  2   44   92    80 0.388   0.78
 3.04 Term +  65368  65488  121  1  1  106   45    81 0.608   2.57
 3.05 PlyA +  66591  66596    6                               1.05

 4.03 PlyA -  66984  66979    6                               1.05
 4.02 Term -  72011  71947   65  0  2   86   48    63 0.812  -0.83
 4.01 Init -  75425  75116  310  2  1   72   -8   289 0.847  13.34
 4.00 Prom -  87410  87371   40                              -3.65

 5.00 Prom +  88823  88862   40                              -6.35
 5.01 Init +  91947  91988   42  2  0   53   80    42 0.492   0.37
 5.02 Intr +  93489  93626  138  2  0   91   30    85 0.530   2.74
 5.03 Intr +  98715  98773   59  2  2   68   67    36 0.440  -3.74
 5.04 Intr + 100001 100191  191  2  2   49  105   193 0.829  15.41
 5.05 Intr + 101128 101273  146  2  2  121   98   141 0.999  17.48
 5.06 Intr + 107072 107274  203  1  2  108   94    93 0.998   9.06
 5.07 Intr + 112037 112143  107  2  2   78   92    33 0.996   1.64
 5.08 Intr + 113757 113904  148  1  1  122  107    81 0.998  11.77
 5.09 Intr + 116508 116728  221  0  2   69  113   145 0.999  12.12
 5.10 Intr + 117706 117992  287  2  2   96   92   225 0.995  19.84
 5.11 Intr + 120124 120246  123  0  0   42   76    91 0.897   3.16
 5.12 Intr + 120374 120807  434  1  2   77   63   295 0.998  17.42
 5.13 Intr + 124324 124432  109  1  1   76   87   118 0.998   9.87
 5.14 Intr + 125310 125436  127  2  1   82   53    91 0.987   4.33
 5.15 Term + 126553 126704  152  2  2   86   49   116 0.984   4.59
 5.16 PlyA + 127854 127859    6                               1.05

 6.05 PlyA - 130498 130493    6                               1.05
 6.04 Term - 130708 130500  209  2  2   37   48   172 0.354   4.62
 6.03 Intr - 130955 130810  146  1  2  101   -5   115 0.513   2.51
 6.02 Intr - 133649 133476  174  1  0   46   72   147 0.966   7.03
 6.01 Init - 135305 135169  137  2  2   73   86    53 0.609   3.26
 6.00 Prom - 136380 136341   40                              -8.85

 7.00 Prom + 139462 139501   40                              -6.05
 7.01 Init + 142080 142207  128  2  2   92   68   156 0.661  13.84
 7.02 Intr + 146495 146654  160  2  1   71   85    20 0.324  -0.93
 7.03 Intr + 146831 146971  141  1  0   82   76    89 0.976   6.73
 7.04 Intr + 148255 148359  105  0  0   38   84   130 0.980   7.09
 7.05 Intr + 155714 155872  159  1  0   61   91    62 0.857   3.06
 7.06 Intr + 157691 157759   69  1  0   84   55    69 0.751   1.66
 7.07 Intr + 158467 158529   63  0  0   70  111    28 0.705   1.30
 7.08 Intr + 161866 162016  151  0  1    5   88   121 0.920   2.61
 7.09 Intr + 172426 172521   96  2  0   70   92    91 0.864   6.76
 7.10 Intr + 188964 189085  122  1  2   40   93    93 0.926   4.29
 7.11 Intr + 189419 189550  132  1  0   48   67   149 0.980   8.72
 7.12 Intr + 191554 191943  390  0  0   66   85   238 0.853  15.29
 7.13 Intr + 192723 192935  213  2  0   72   61   187 0.457  12.39
 7.14 Term + 194854 194865   12  0  0  123   48     3 0.407  -2.97
 7.15 PlyA + 197691 197696    6                               1.05

 8.04 PlyA - 197752 197747    6                               1.05
 8.03 Term - 202305 202090  216  0  0   98   37   148 0.394   6.86
 8.02 Intr - 206871 206652  220  2  1   67   53    93 0.413   1.08
 8.01 Init - 211988 211543  446  2  2   59   51   607 0.248  49.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 188349 188430   82  2  1   86   64    70 0.891   5.58


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_1|55_aa
XWMTVEEEEEEEEEEEEERRKKKKEKEKKRKKKKKEKEKKRKKKKKKKPKMNIIN

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_1|168_bp
ncttggatgacagtggaagaagaagaagaggaagaggaagaagaagaagaagaaagaaga
aagaagaagaaggaaaaggagaagaagaggaagaagaagaagaaggaaaaggagaagaag
aggaagaagaagaagaagaagaaacccaaaatgaacatcataaattaa

>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_2|42_aa
MSSPSDGYCVQKPKEYAESDILYGMLLMPEKHPAPLDAGALF

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_2|129_bp
atgagttcacctagtgatggatactgtgtacagaaaccaaaagaatatgcagagagtgat
attctgtatggaatgctgctgatgcctgaaaaacaccctgctcctctagatgctggggcg
cttttctga

>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_3|125_aa
MKQGIEMITFAPTNNTLAAADRETRAESRDKLLAAGETSLPRAKEIRMGADAGTFVKRNA
GSQLNAGWSSAYTQLLASAMFMFYTRNVISYGTVAFKNLPIDFDVGEIPNIIFLSSQNIV
NGMFY

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_3|378_bp
atgaaacaaggaattgaaatgatcacatttgcacctacaaacaacactctggcagctgct
gatagggagacaagagcagagagcagagataagctgctggcagcaggagagacatctctt
cctagagcgaaagagataaggatgggagcagatgcaggtacatttgtcaagaggaatgca
ggaagtcaactaaatgccggctggagctctgcttacacgcagctgctggcctctgctatg
ttcatgttttacaccagaaatgtaatatcttatggaactgtggcttttaagaatcttcca
attgactttgatgttggagaaataccaaatatcattttcctttctagtcagaatatagtg
aatgggatgttttattaa

>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_4|124_aa
MVNRSPRCLHGGRPPGSLRPKRWLPPHAEKRRKGKSRGGGARRETPRETREKRAAIAGVR
ARLRASPQVACQGPARHTGRSDEEGDPPVPSDEAALCTEELRQPIHNENNGSKRVLFGRK
VRTR

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_4|375_bp
atggtgaatcggtccccgcgatgtcttcacggcgggcggcccccaggctcgctccggcct
aagcgctggctccctccacacgcggagaagagaaggaaaggcaagtccagaggtgggggt
gcgaggcgggaaacccctcgtgagactagagagaagcgggcggcaatcgccggggtccgg
gcccggctccgagcctctcctcaggtggcttgtcagggcccagcccgacacactggccga
agcgacgaagagggtgatcctcctgtcccctcagacgaggcagcactgtgcactgaggag
ctgaggcagcctattcataacgagaacaatggcagcaaaagggtattgtttggaaggaaa
gtgcgtacaagataa

>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_5|828_aa
MSKGGKVVEGEIKEVDSVRIELKDTQLVSAAELIAHLVVERTPPLPIGLQKLSSVLLIAV
IIWKEERFGVETIRYFIHRMISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSS
HLDKASVMRLTISYLRVRKLLDAGDLDIEDDMKAQMNCFYLKALDGFVMVLTDDGDMIYI
SDNVNKYMGLTQVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLD
SKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKG
QVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTE
CVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDT
ETDDQQLEEVPLYNDVMLPSPNEKLQNINLAMSPLPTAETPKPLRSSADPALNQEVALKL
EPNPESLELSFTMPQIQDQTPSPSDGSTRQSSPEPNSPSEYCFYVDSDMVNEFKLELVEK
LFAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPESASPQST
VTVFQQTQIQEPTANATTTTATTDELKTVTKDRMEDIKILIASPSPTHIHKETTSATSSP
YRDTQSRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTVPEEELNPKILALQNAQR
KRKMEHDGSLFQAVGIGTLLQQPDDHAATTSLSWKRVKGCKSSEQNGMEQKTIILIPSDL
ACRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_5|2487_bp
atgagcaaagggggcaaagtggtagaaggtgagatcaaagaggtagatagtgttagaatt
gaattgaaggacacccagttggtgtccgctgcagaactgattgctcacctggtggtggag
agaacccctcctctcccgatagggttgcagaagttgtcttctgtgttgttgattgctgtg
atcatttggaaggaggagagatttggggtggagacaattcggtacttcattcacaggatg
ataagttctgaacgtcgaaaagaaaagtctcgagatgcagccagatctcggcgaagtaaa
gaatctgaagttttttatgagcttgctcatcagttgccacttccacataatgtgagttcg
catcttgataaggcctctgtgatgaggcttaccatcagctatttgcgtgtgaggaaactt
ctggatgctggtgatttggatattgaagatgacatgaaagcacagatgaattgcttttat
ttgaaagccttggatggttttgttatggttctcacagatgatggtgacatgatttacatt
tctgataatgtgaacaaatacatgggattaactcaggtattgcactgcacaggccacatt
cacgtatatgataccaacagtaaccaacctcagtgtgggtataagaaaccacctatgacc
tgcttggtgctgatttgtgaacccattcctcacccatcaaatattgaaattcctttagat
agcaagactttcctcagtcgacacagcctggatatgaaattttcttattgtgatgaaaga
attaccgaattgatgggatatgagccagaagaacttttaggccgctcaatttatgaatat
tatcatgctttggactctgatcatctgaccaaaactcatcatgatatgtttactaaagga
caagtcaccacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaa
actcaagcaactgtcatatataacaccaagaattctcaaccacagtgcattgtatgtgtg
aattacgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaa
tgtgtccttaaaccggttgaatcttcagatatgaaaatgactcagctattcaccaaagtt
gaatcagaagatacaagtagcctctttgacaaacttaagaaggaacctgatgctttaact
ttgctggccccagccgctggagacacaatcatatctttagattttggcagcaacgacaca
gaaactgatgaccagcaacttgaggaagtaccattatataatgatgtaatgctcccctca
cccaacgaaaaattacagaatataaatttggcaatgtctccattacccaccgctgaaacg
ccaaagccacttcgaagtagtgctgaccctgcactcaatcaagaagttgcattaaaatta
gaaccaaatccagagtcactggaactttcttttaccatgccccagattcaggatcagaca
cctagtccttccgatggaagcactagacaaagttcacctgagcctaatagtcccagtgaa
tattgtttttatgtggatagtgatatggtcaatgaattcaagttggaattggtagaaaaa
ctttttgctgaagacacagaagcaaagaacccattttctactcaggacacagatttagac
ttggagatgttagctccctatatcccaatggatgatgacttccagttacgttccttcgat
cagttgtcaccattagaaagcagttccgcaagccctgaaagcgcaagtcctcaaagcaca
gttacagtattccagcagactcaaatacaagaacctactgctaatgccaccactaccact
gccaccactgatgaattaaaaacagtgacaaaagaccgtatggaagacattaaaatattg
attgcatctccatctcctacccacatacataaagaaactactagtgccacatcatcacca
tatagagatactcaaagtcggacagcctcaccaaacagagcaggaaaaggagtcatagaa
cagacagaaaaatctcatccaagaagccctaacgtgttatctgtcgctttgagtcaaaga
actacagttcctgaggaagaactaaatccaaagatactagctttgcagaatgctcagaga
aagcgaaaaatggaacatgatggttcactttttcaagcagtaggaattggaacattatta
cagcagccagacgatcatgcagctactacatcactttcttggaaacgtgtaaaaggatgc
aaatctagtgaacagaatggaatggagcaaaagacaattattttaataccctctgattta
gcatgtagactgctggggcaatcaatggatgaaagtggattaccacagctgaccagttat
gattgtgaagttaatgctcctatacaaggcagcagaaacctactgcagggtgaagaatta
ctcagagctttggatcaagttaactga

>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_6|221_aa
MRESLEFPKDWLNGCDQNAHSPLLGFGRRRSPIFLAIPTCVELSSRGTAEKKIIHELTPV
KACTVGDIVMTHRCLRNEPLTLQAAGSAAEDGLQLSALSGDCLRPGAARASRMRSHTYAQ
RAAATPQRTRKSPCAAGALEPTAGAAGGARDCAPATPGTEGCRVPSACLVFSPRGSDRCR
SQAPVFPLRPRMEPRQGNKRNSIVHGDRVSGQRLGKTIHYR

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_6|666_bp
atgagggaaagtttggaatttcctaaagactggttaaatggttgtgaccaaaatgctcat
agtcctctactgggatttgggagaagaaggagccccatcttcttggccatacccacctgt
gtggaactttcctcaagaggtacagctgaaaaaaagatcatccatgagttgacccctgtt
aaagcttgcactgtgggtgatattgtgatgacacacagatgtctcaggaatgaaccactt
actctccaagctgctggaagtgcagcagaagatggtcttcagctgtcagccctttctggg
gattgtctcaggccaggagcggccagggcctcccgcatgcgctcccacacgtacgcgcag
cgggcagcagccaccccacagcgtacacgaaagtcgccttgcgcggctggagccctggag
cccacggccggggccgcgggcggggcccgggactgcgcgccagccacaccaggaacagaa
gggtgccgggtaccttccgcatgcttggtattctccccgcggggctctgaccgctgccgc
tctcaggcacctgtctttcctctccgtcccagaatggagccaagacaagggaataaacga
aattcaatagtacacggagatcgggtgtctgggcagcgtcttggaaaaactatccactac
aggtaa

>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_7|646_aa
MGTPPGLQTDCEALLSRFQETDSVRFEDFTELWRNMKFGTIFCGRMRNLEKNMFTKEALA
LAWRYFLPPYTFQIRVGALYLLYGLYNTQLCQPKQKIRVALKDWDEVLKFQQDLVNAQHF
DAAYIFRKLRLDRAFHFTAMPKLLSYRMKKKIHRAEVTEEFKDPSDRVMKLITSDVLEEM
LNVHDHYQNMKHVISVDKSKPDKALSLIKDDFFDNIKNIVLEHQQWHKDRKNPSLKSKTN
DGEEKMEGNSQETERCERAESLAKIKSKAFSVVIQASKSRRHRQVKLDSSDSDSASGQGQ
VKATRKKEKKERLKPAGRKMSLRNKGNVQNIHKEDKPLSLSMPVITEEEENESLSGTDLG
DFVLQQPYCRGGKWGVQVLMGVVEMLNQPRVDPLIYNKSNRKVKEKKSDLKGLWCGGEDR
VVAATHTHGCGGLTSSEVQTEERPSLVSGRAVVGYDHVSVAHPVDVQSVSWPFIHSFMQA
SSYKDIHSPTQQKSAESLLRAGNYFHIGDKTEGDMKSTAHLEPTEMALSGFAGELLPRRI
NAQHLAHPPHTPSSSPALLLPAGAEHGVPTPLAQSQPSASRANEGTARFWRCEFKVRLEF
WVGFVRLPFGDQGGLHGSAARWPTGCIRSGQHKAGWRPHLVTMVRK

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_7|1941_bp
atggggactcctcccggcctgcagaccgactgcgaggcgctgctcagccgcttccaggag
acggacagtgtacgcttcgaggacttcacggagctctggagaaacatgaagttcgggact
atcttctgtggcagaatgagaaatttagaaaagaacatgtttacaaaagaagctttagct
ttggcttggcgatattttttacctccatacaccttccagatcagagttggtgctttgtat
ctgctatatggattatataatacccaactgtgtcaaccaaaacaaaagatcagagttgcc
ctgaaggattgggatgaagttttaaaatttcagcaagatttagtaaatgcacagcatttt
gatgcagcttatatttttaggaagctacgactagacagagcatttcactttacagcaatg
cccaaattgctgtcatataggatgaagaaaaaaattcaccgagctgaagttacagaagaa
tttaaggacccaagtgatcgtgtgatgaaacttatcacttctgatgtattagaggaaatg
ctgaatgttcatgatcattatcagaacatgaaacatgtaatttcagttgataagtccaag
ccagataaagccctcagcttgataaaggatgatttttttgacaatattaagaacatagtt
ttggagcatcagcagtggcacaaagacagaaagaatccatccttaaagtcaaaaactaat
gatggagaagaaaaaatggaaggaaattcacaagaaacggagagatgtgaaagggcagaa
tcattagcgaaaataaaatcaaaggccttttcagttgtcatacaggcatccaaatcaaga
aggcatcgtcaagtcaaactcgactcttctgactctgattctgcatctggtcaagggcaa
gtcaaagcaactaggaaaaaagagaagaaagaaagattgaaaccagcaggaaggaagatg
tctctcagaaacaaaggcaatgtgcagaatatacacaaggaagataaacctttaagtctg
agtatgcctgtaattacagaagaagaagagaatgaaagtttgagtggaacagatttggga
gattttgtgctgcagcagccttactgccgaggaggaaagtggggagtccaagttcttatg
ggcgttgtggagatgctaaatcaaccacgggtggatcccttgatatataacaagagcaac
aggaaagtcaaggagaaaaagtcagacctgaaggggctttggtgtggaggagaagacaga
gtggtggctgccacccacactcatggctgtggaggtctgacgagctctgaggtccagaca
gaagagcgtccatccctagtcagtggcagggctgtagttggctatgatcatgtatcagtt
gctcatccagtggacgtccaatcagttagttggccattcattcattcattcatgcaggca
tccagttataaagacatccattcacccactcaacagaaatctgctgagagcctactacgt
gctgggaactattttcacatcggagacaaaacagagggtgacatgaagagcacggcccac
ttggagcctacggagatggcgttgagcggtttcgcaggagagctcctgccccggaggatt
aatgcccagcacctggctcatcctccccacacccctagctcttctcccgctttgctcctt
ccagctggggctgagcatggggtcccaaccccgctggcccagagccagccttcagcgagc
cgggcaaacgaaggcactgcgcgtttttggcgctgtgagttcaaggttcgcctcgagttc
tgggtcgggtttgtgcgtctgccttttggggatcagggtggcttgcatggctcggctgcc
cggtggcccacgggctgtattcgcagcgggcagcacaaggccggctggagaccgcatctg
gttaccatggtgaggaagtga

>gi568815584f:61620382_61847082|GENSCAN_predicted_peptide_8|293_aa
MLATRVVSLVGKRAISTLVSVRAHGNVVKSDDYALPAYVDRRDYPVPDVAHVKHLSARQK
AVKKKEKASWSNRSTDGKVELYHIQFKESFAEMNRGVNEWKTVVGAAMFFLGFTAFIIIW
EKRCVYGPIPHTFDKEWVPMQTKRMLDMRRWGTEIGLKTGELAERMYREPSLHQIQQPTM
KPEDYSLPKCHGLNYVPQNSYVEALTPLPPNTTVFRDGAFKESSPQQPLIQMDFPNSSSN
TKNYPSSAIVSTVQQLSGWKEENNFFSDGGSYFRLYHLQWLTVGVNLTGLKDA

>gi568815584f:61620382_61847082|GENSCAN_predicted_CDS_8|882_bp
atgttggctaccagggtagttagcctagttggcaagcgagcaatttccaccttggtgtct
gtacgagcacacggaaatgttgtgaagagcgatgactatgcgctcccagcttatgtggat
cgacgtgactatcccgtacccgatgtggcccatgtcaagcacctgtctgccagacagaaa
gccgtgaagaagaaggagaaggcctcctggagcaaccgctccacggatgggaaagtcgag
ttgtatcacattcagttcaaggagagctttgctgagatgaacaggggcgtgaacgagtgg
aagacggttgtgggcgctgccatgttcttccttggcttcacggcgttcattatcatctgg
gagaagcgctgtgtgtacggccccatcccgcacacctttgacaaagagtgggtgcccatg
cagaccaagaggatgctggacatgagaaggtggggaacagagatagggctgaaaacagga
gaactggcagaaaggatgtacagagagccaagcctccaccagatccagcagccaacaatg
aagccagaggactattcccttcctaagtgtcatggattgaattatgttccccaaaattca
tatgttgaggccctgactccactacctccgaatacaactgtatttagagatggggccttt
aaagagagctcaccacagcagcctcttattcagatggacttccccaatagcagctcaaac
accaaaaattacccttccagcgccattgtttctacagtgcaacagctctcaggttggaaa
gaagagaacaatttcttctctgacggaggcagttatttcaggctttaccacctgcaatgg
ttaacagtaggtgtcaacttgactggattgaaggatgcctag