GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:41:11

Sequence gi568815596f:205583291_205895055 : 311765 bp : 44.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   2219   2214    6                               1.05
 1.02 Term -   6166   6081   86  2  2   85   50    72 0.382   0.92
 1.01 Init -  17575  17443  133  1  1   78  110    86 0.781  10.10
 1.00 Prom -  18339  18300   40                              -1.86

 2.05 PlyA -  18455  18450    6                               1.05
 2.04 Term -  24921  24865   57  0  0   95   50    35 0.271  -1.91
 2.03 Intr -  32216  32078  139  1  1   69   38   148 0.861   8.37
 2.02 Intr -  39865  39780   86  1  2   72   98    60 0.165   4.02
 2.01 Init -  71560  71522   39  1  0   62   95    53 0.114   3.59
 2.00 Prom -  73063  73024   40                              -5.16

 3.00 Prom +  85652  85691   40                              -2.56
 3.01 Init +  96940  97002   63  0  0   56  100    21 0.212   1.25
 3.02 Intr +  97225  97311   87  0  0  107  105     6 0.259   4.37
 3.03 Intr + 100051 100073   23  0  2   65  115    -2 0.251  -3.46
 3.04 Intr + 102953 103111  159  2  0  106   57   114 0.532   9.20
 3.05 Intr + 111118 111197   80  1  2  110   61    22 0.070   0.89
 3.06 Intr + 114254 114431  178  0  1   75   82   279 0.809  24.98
 3.07 Intr + 116126 116250  125  2  2   39   68    57 0.516  -0.97
 3.08 Intr + 122788 122963  176  2  2  113   84   131 0.888  14.86
 3.09 Intr + 123547 123662  116  0  2   26   31    99 0.141  -2.75
 3.10 Intr + 132903 133084  182  0  2   73   82   363 0.752  33.71
 3.11 Intr + 139188 139418  231  1  0   55  101   296 0.986  25.34
 3.12 Intr + 140495 140650  156  0  0   61   70   183 0.999  13.78
 3.13 Intr + 142623 142792  170  1  2   98   80   124 0.822  12.27
 3.14 Intr + 144601 144756  156  0  0   99   94   205 0.797  22.41
 3.15 Intr + 157229 157373  145  1  1   73   94   173 0.947  16.26
 3.16 Intr + 159913 160262  350  2  2  138  102   312 0.971  32.68
 3.17 Intr + 162456 162600  145  2  1   71  110   185 0.996  18.86
 3.18 Intr + 163752 163838   87  1  0  129   63    27 0.948   4.24
 3.19 Intr + 166435 166551  117  2  0   86  103   138 0.888  15.54
 3.20 Intr + 169545 169685  141  1  0   85  115   126 0.982  15.32
 3.21 Intr + 179385 179507  123  1  0   64   18    92 0.323   0.36
 3.22 Intr + 180384 180646  263  1  2   53   75   439 0.810  36.31
 3.23 Intr + 182184 182280   97  2  1   84   71   123 0.940   9.78
 3.24 Term + 192956 193236  281  0  2   82   55   466 0.930  38.31
 3.25 PlyA + 196398 196403    6                               1.05

 4.00 Prom + 199691 199730   40                              -4.06
 4.01 Init + 201214 201217    4  0  1  109   57     0 0.275  -0.84
 4.02 Intr + 208945 209019   75  2  0   78   89    72 0.700   5.79
 4.03 Term + 211464 211768  305  1  2   80   49   425 0.931  33.13
 4.04 PlyA + 212256 212261    6                               1.05

 5.00 Prom + 220135 220174   40                              -3.06
 5.01 Init + 221496 221563   68  2  2   59   91    76 0.405   5.54
 5.02 Intr + 223823 223848   26  2  2  101   51    21 0.086  -2.63
 5.03 Term + 238706 238812  107  0  2   87   44    73 0.026   1.37
 5.04 PlyA + 240602 240607    6                               1.05

 6.06 PlyA - 242509 242504    6                               1.05
 6.05 Term - 251284 251174  111  1  0  105   44    54 0.171   1.26
 6.04 Intr - 265244 265187   58  1  1  100   42    78 0.061   3.29
 6.03 Intr - 269053 268916  138  0  0  122   74    -9 0.493   0.68
 6.02 Intr - 274318 274161  158  1  2   81   58   129 0.902   8.01
 6.01 Init - 277277 277191   87  2  0   85   65     2 0.332  -1.66
 6.00 Prom - 279802 279763   40                              -2.16

 7.00 Prom + 282435 282474   40                              -4.86
 7.01 Init + 289983 290127  145  2  1   76   85    73 0.535   6.08
 7.02 Intr + 290725 291078  354  2  0  -32  115   232 0.576   9.16
 7.03 Term + 300765 300826   62  1  2   28   49   110 0.067  -0.93
 7.04 PlyA + 301174 301179    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 239103 239225  123  2  0    8   47   156 0.803   1.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:205583291_205895055|GENSCAN_predicted_peptide_1|72_aa
MEYYAAIKRNEIMSFAGTWMELEAISLGKLMQEQKTKHRIFSLTETAFEMGLDLELPWEQ
RFGEPDFGEILW

>gi568815596f:205583291_205895055|GENSCAN_predicted_CDS_1|219_bp
atggaatactatgcagccataaaaaggaatgagatcatgtcctttgcagggacgtggatg
gagctggaagccattagcctcggcaaactgatgcaggaacagaaaaccaaacaccgtata
ttctcacttacagagacagcatttgagatgggactggatctggagttgccgtgggaacag
aggtttggagagcctgattttggtgagatcctgtggtga

>gi568815596f:205583291_205895055|GENSCAN_predicted_peptide_2|106_aa
MEAEKFKDEELHLPFSMTSLNVELGRDAYSWLFEAGTSASIQAPEVLLADSLQDLRVLPW
KEKKRHMLAAPKLAVRLENMFLSLLCSLEKPLHSYLPKVLPGDRTL

>gi568815596f:205583291_205895055|GENSCAN_predicted_CDS_2|321_bp
atggaggctgagaagttcaaggatgaggagctgcatctgcctttctccatgacatcactg
aatgtggagttgggacgagatgcatacagttggctctttgaagctggcaccagtgcttct
atacaagcccccgaggtgctgctggcagatagtctacaggatctgcgggtcctcccctgg
aaagagaagaagagacacatgttagcagctcctaagctggccgtccggctggagaacatg
ttcctcagcctcctgtgcagtttggaaaaaccactacacagttacctgcccaaggtgcta
cctggagacagaacactctag

>gi568815596f:205583291_205895055|GENSCAN_predicted_peptide_3|1216_aa
MRPSLKGSGKSCSPGTEDSQECPSPKPWLHYSHKQESPTLGTGKNGLACLTPSERPTRTP
PGKSLRHFFNAALCRKVRSRLQRWSLEKPLPAAAGEFPPPLPSRLALCFSTYRRKCSNSP
SLDFAISLRVMNLPQVKDPPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQK
IVLNFNPHFEIEKHDCKAKFCYAYDSKSPKEIAKRSSYVVFIVAEGESMAFGRKNLGATP
LTILFKFPAILTTTFTLHLESKDVRASNRVSAEVIDSSHRENSPAFSVNGAEPESWRLIP
GTDASSHTARASTGRYNIVANQPEALCAKQTACFWLYDFIEIRDGDSESADLLGKHCGNI
APPTIISSGSMLYIKFTSDYARQGAGFSLRYEIFKTGSEDCSKNFTSPNGTIESPGFPEK
YPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLIGK
YCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQEPLENFQCNVPLGMESGRI
ANEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQGAI
SRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLHAPLLTRFVR
IRPQTWHSGIALRLELFGCRVTDAPCSNMLGMLSGLIADSQISASSTQEYLWSPSAARLV
SSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSY
SLNGKDWEYIQDPRTQQPKLFEGNMHYDTPDIRRFDPIPAQYVRVYPERWSPAGIGMRLE
VLGCDWTGAENLPPIQAGFIYVPWNQGLSAVGDPGAYSKPTVETLGPTVKSEETTTPYPT
EEEATECGENCSFEDDKDLQLPSGFNCNFDFLEEPCGWMYDHAKWLRTTWASSSSPNDRT
FPGPKRGTEISSPNATLFSVQVARMVLYKLDLKVQVTPVFCKAHDRNFLRLQSDSQREGQ
YARLISPPVHLPRSPVCMEFQYQATGGRGVALQVVREASQESKLLWVIREDQGGEWKHGR
IILPSYDMEYQIVFEGVIGKGRSGEIAIDDIRISTDVPLENCMGGTLLPGTEPTVDTVPM
QPIPAYWYYVMAAGGAVLVLVSVALALVLHYHRFRYAAKKTDHSITYKTSHYTNGAPLAV
EPTLTIKLEQDRGSHC

>gi568815596f:205583291_205895055|GENSCAN_predicted_CDS_3|3651_bp
atgaggccttcactcaaggggagtgggaagtcttgcagccctggtacagaggactcccag
gaatgcccttcacctaaaccctggctacattattctcacaaacaggagtctcccacattg
ggcactggcaaaaatggtttggcatgcctgacaccaagtgagaggccaaccaggacaccc
ccagggaaaagcctgcggcatttcttcaacgctgccctatgccggaaagttaggtctcgg
ctgcagcgctggtctctggagaagcctctgcctgcagccgccggcgagttcccgcctccc
ctccccagccgcctcgctctttgcttttccacgtataggagaaaatgctctaacagtcca
agcctggattttgctatctctcttcgggtgatgaatttgccccaggtgaaagacccaccg
tgcggaggtcgtttgaattccaaagatgctggctatatcacctctcccggttacccccag
gactacccctcccaccagaactgcgagtggattgtttacgcccccgaacccaaccagaag
attgtcctcaacttcaaccctcactttgaaatcgagaagcacgactgcaaggccaaattc
tgttatgcttatgacagcaaatctcccaaggaaattgccaagaggtcatcctatgttgta
ttcatagtggcagagggagaaagcatggcttttggaaggaaaaacttaggagctaccccg
ctcaccatcctcttcaaattccctgccatcctcaccaccaccttcactctccatctggag
tccaaagatgtgagggccagtaatagagtgtcagcggaagtaattgattcctcacaccga
gagaattcgcctgcctttagtgtcaatggagctgaaccagagtcttggaggctcatcccc
ggcactgatgcctcctcccacactgccagggcctccactggtcgctacaatattgtggcc
aaccagccagaagctctgtgcgcaaaacaaacagcctgcttctggctgtatgactttatc
gagattcgggatggggacagtgaatccgcagacctcctgggcaaacactgtgggaacatc
gccccgcccaccatcatctcctcgggctccatgctctacatcaagttcacctccgactac
gcccggcagggggcaggcttctctctgcgctacgagatcttcaagacaggctctgaagat
tgctcaaaaaacttcacaagccccaacgggaccatcgaatctcctgggtttcctgagaag
tatccacacaacttggactgcacctttaccatcctggccaaacccaagatggagatcatc
ctgcagttcctgatctttgacctggagcatgaccctttgcaggtgggagagggggactgc
aagtacgattggctggacatctgggatggcattccacatgttggccccctgattggcaag
tactgtgggaccaaaacaccctctgaacttcgttcatcgacggggatcctctccctgacc
tttcacacggacatggcggtggccaaggatggcttctctgcgcgttactacctggtccac
caagagccactagagaactttcagtgcaatgttcctctgggcatggagtctggccggatt
gctaatgaacagatcagtgcctcatctacctactctgatgggaggtggacccctcaacaa
agccggctccatggtgatgacaatggctggacccccaacttggattccaacaaggagtat
ctccaggtggacctgcgctttttaaccatgctcacggccatcgcaacacagggagcgatt
tccagggaaacacagaatggctactatgtcaaatcctacaagctggaagtcagcactaat
ggagaggactggatggtgtaccggcatggcaaaaaccacaaggtatttcaagccaacaac
gatgcaactgaggtggttctgaacaagctccacgctccactgctgacaaggtttgttaga
atccgccctcagacctggcactcaggtatcgccctccggctggagctcttcggctgccgg
gtcacagatgctccctgctccaacatgctggggatgctctcaggcctcattgcagactcc
cagatctccgcctcttccacccaggaatacctctggagccccagtgcagcccgcctggtt
agcagccgctcgggctggttccctcgaatccctcaggcccagcccggtgaggagtggctt
caggtagatctgggaacacccaagacagtgaaaggtgtcatcatccagggagcccgcgga
ggagacagtatcactgctgtggaagccagagcatttgtgcgcaagttcaaagtctcctac
agcctaaacggcaaggactgggaatacattcaggaccccaggacccagcagccaaagctg
ttcgaagggaacatgcactatgacacccctgacatccgaaggtttgaccccattccggca
cagtatgtgcgggtatacccggagaggtggtcgccggcggggattgggatgcggctggag
gtgctgggctgtgactggacaggtgcagaaaacctccccccgatacaagctggcttcatt
tatgtgccctggaatcaggggctcagcgctgtaggggatccaggagcttactccaagccc
acggtagagacgctgggacccactgtgaagagcgaagagacaaccaccccctaccccacc
gaagaggaggccacagagtgtggggagaactgcagctttgaggatgacaaagatttgcag
ctcccttcgggattcaattgcaacttcgatttcctcgaggagccctgtggttggatgtat
gaccatgccaagtggctccggaccacctgggccagcagctccagcccaaacgaccggacg
tttccagggccaaaaagaggtactgagatttcctcaccaaatgccaccttgttctctgta
caagtggccagaatggtcctgtacaagttggatttgaaggtgcaggtcacacctgtgttc
tgcaaggcacatgacaggaatttcttgcggctgcagagtgacagccagagagagggccag
tatgcccggctcatcagcccccctgtccacctgccccgaagcccggtgtgcatggagttc
cagtaccaggccacgggcggccgcggggtggcgctgcaggtggtgcgggaagccagccag
gagagcaagttgctgtgggtcatccgtgaggaccagggcggcgagtggaagcacgggcgg
atcatcctgcccagctacgacatggagtaccagattgtgttcgagggagtgatagggaaa
ggacgttccggagagattgccattgatgacattcggataagcactgatgtcccactggag
aactgcatggggggcaccctcctgccagggaccgagcccacagtggacacggtgcccatg
cagcccatcccagcctactggtattacgtaatggccgccgggggcgccgtgctggtgctg
gtctccgtcgcgctggccctggtgctccactaccaccggttccgctatgcggccaagaag
accgatcactccatcacctacaaaacctcccactacaccaacggggcccctctggcggtg
gagcccaccctaaccattaagctagagcaagaccgtggctcgcactgctga

>gi568815596f:205583291_205895055|GENSCAN_predicted_peptide_4|127_aa
MVDIPEIHEREGYEDEIDGEYCYDLADEYEVDWSNSSSATSGSGAPSTDKEKSWLYTLDP
ILITIIAMSSLGVLLGATCAGLLLYCTCSYSGLSSRSCTTLENYNFELYDGLKHKVKMNH
QKCCSEA

>gi568815596f:205583291_205895055|GENSCAN_predicted_CDS_4|384_bp
atggtggacatcccagaaatacatgagagagaaggatatgaagatgaaattgatggtgag
tactgttatgatttagcagatgaatacgaggtggactggagcaattcttcttctgcaacc
tcagggtctggcgccccctcgaccgacaaagaaaagagctggctgtacaccctggatccc
atcctcatcaccatcatcgccatgagctcactgggcgtcctcctgggggccacctgtgca
ggcctcctgctctactgcacctgttcctactcgggcctgagctcccgaagctgcaccaca
ctggagaactacaacttcgagctctacgatggccttaagcacaaggtcaagatgaaccac
caaaagtgctgctccgaggcatga

>gi568815596f:205583291_205895055|GENSCAN_predicted_peptide_5|66_aa
MLMRATQTIALSPAINGSSHQSWFGGSAADTRLSKLKPRWVHKRVPTERTAPTPPGETVK
KAIEKV

>gi568815596f:205583291_205895055|GENSCAN_predicted_CDS_5|201_bp
atgctcatgcgtgcgactcagacgatagccttgtcccctgccatcaatggatcttcacac
cagagttggtttggaggttcagcagctgatacacggctgtccaaacttaagcccagatgg
gtccacaaaagggtcccaacggaaagaactgctcccacacctcctggagaaacagtcaag
aaggctatagaaaaggtttag

>gi568815596f:205583291_205895055|GENSCAN_predicted_peptide_6|183_aa
MEREDPDASPGACQGSTREATGEECTQASGWNDEPKTAQLENGTLEAGSGSDDSTFSSGA
AASLKTKGVTMVERLLNSEEGSFASLIKNLTQWMMPAIHKCTLEIKCPPCQKKAEYRSGS
NSTDGWHRSNGDDSEEEKSNYVETANLKIGGETKKINDLIQESKKTKEDQVVPKDWAWIP
ERI

>gi568815596f:205583291_205895055|GENSCAN_predicted_CDS_6|552_bp
atggagagagaggaccctgatgcatccccaggagcctgccaggggagcacgagggaggca
accggagaagaatgcacccaggcatctgggtggaatgatgaacccaagaccgcacagcta
gaaaatggcaccctggaagctggatcgggctctgatgattccacattcagctcaggggca
gctgcctctctaaagaccaagggtgttacaatggtggagaggctgttgaattcagaggag
gggagctttgcgagcttgattaaaaatttaacacagtggatgatgccagccatacacaag
tgtaccttagagataaaatgtccaccatgtcagaagaaagcagagtacagatctggcagt
aactctactgatggatggcatcgaagtaatggtgatgacagtgaggaagagaaatccaat
tatgtagaaactgcgaatttgaaaattggaggggaaactaaaaaaatcaatgacctaatt
caggagtcaaagaaaaccaaagaagatcaagtggtccccaaagactgggcttggatacct
gaaagaatatag

>gi568815596f:205583291_205895055|GENSCAN_predicted_peptide_7|186_aa
MPDLPWLMVEERIKSLRKSGEAGADIPRKARKIMKVDYVPKDDPKESAETFWSRILGELD
DKRNHGQGLRDTGSVSGIYSFWWVLGLADFKNEAADLAVLQLSDVVHPELFVPHGAFMVY
GSDLKDEAADLTVSVTALKGGASGVVCSSRWVRGLADLKNDAADPRGVPKPQAMDQYMDH
YWSMAC

>gi568815596f:205583291_205895055|GENSCAN_predicted_CDS_7|561_bp
atgccggatttgccatggctgatggtggaagaaaggattaaaagtctcaggaaaagtgga
gaggctggagcggatataccaagaaaggccaggaaaatcatgaaagttgattatgttcca
aaagacgacccgaaagaatctgctgagaccttctggagtaggatcctgggggagctagat
gataaacggaaccatggccaaggtttaagagatactgggtctgtgtccggaatttattcc
ttctggtgggttcttggtctcgctgacttcaagaatgaagctgcagacctcgcggtatta
cagctctcagacgtggtgcatccggagttgtttgttcctcacggtgcgttcatggtctat
ggctctgacttaaaggatgaagctgcagacctcacggtcagtgttacagctcttaaaggt
ggtgcatccggagttgtttgttcctcccggtgggttcgtggtctcgctgacttgaagaat
gacgcggcagaccctcgcggggtccccaagccccaggccatggaccagtacatggaccac
tactggtccatggcctgttag