GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:39:43

Sequence gi568815595f:14903915_15143005 : 239091 bp : 44.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3726   3797   72  2  0  114   96    72 0.996  10.20
 1.02 Intr +   6947   7015   69  1  0  136  119    48 0.999  12.08
 1.03 Intr +  13335  13418   84  2  0   91   94   176 0.574  18.52
 1.04 Intr +  14436  14645  210  2  0   67   92    54 0.735   2.81
 1.05 Intr +  14840  14919   80  1  2   65   80    82 0.546   3.45
 1.06 Intr +  15776  15825   50  2  2   46   81    49 0.422  -1.68
 1.07 Intr +  17758  17952  195  2  0   84   39   101 0.550   4.19
 1.08 Intr +  17991  18103  113  1  2   70  105    84 0.773   8.40
 1.09 Intr +  18497  18634  138  1  0   49  113    53 0.683   4.56
 1.10 Intr +  19132  19261  130  0  1   23   76   266 0.999  19.17
 1.11 Intr +  20088  20224  137  1  2   83   88   141 0.745  13.89
 1.12 Intr +  22156  22284  129  0  0  114   52   175 0.985  17.39
 1.13 Intr +  28663  28817  155  0  2  140   80    89 0.876  12.17
 1.14 Intr +  43473  43992  520  0  1   38   83   286 0.249  16.06
 1.15 Intr +  44410  44501   92  0  2   79   54    23 0.116  -3.21
 1.16 Intr +  55243  55282   40  1  1  128   94    44 0.295   7.23
 1.17 Intr +  99962 100072  111  1  0  107   82    51 0.217   6.98
 1.18 Intr + 109675 109875  201  0  0   67  110   165 0.946  16.08
 1.19 Intr + 112238 112340  103  1  1   74   96   127 0.999  11.85
 1.20 Intr + 116839 117018  180  2  0   93   82   144 0.999  14.14
 1.21 Intr + 119286 119433  148  1  1   24   86   196 0.999  12.29
 1.22 Intr + 120201 120294   94  0  1   50   61    93 0.993   2.77
 1.23 Intr + 124672 124805  134  0  2   93   76    73 0.993   6.04
 1.24 Intr + 126361 126538  178  1  1   85  113    91 0.990  11.22
 1.25 Intr + 128465 128586  122  1  2  119  106    85 0.998  12.69
 1.26 Intr + 130756 130895  140  1  2   81   97   177 0.999  18.01
 1.27 Intr + 134086 134223  138  2  0   66  111   183 0.999  18.84
 1.28 Intr + 135208 135313  106  2  1   87   93   100 0.515   9.67
 1.29 Term + 138920 139094  175  2  1   69   43   102 0.382   1.03
 1.30 PlyA + 143753 143758    6                               1.05

 2.05 PlyA - 144623 144618    6                               1.05
 2.04 Term - 148719 148527  193  2  1   73   48   199 0.900  11.29
 2.03 Intr - 149553 149466   88  1  1  105   61   131 0.999  11.13
 2.02 Intr - 155561 155455  107  1  2  105   95    21 0.653   4.36
 2.01 Init - 161280 161147  134  0  2  111   82   216 0.981  20.91
 2.00 Prom - 165660 165621   40                              -5.96

 3.15 PlyA - 166177 166172    6                               1.05
 3.14 Term - 171016 169868 1149  1  0  120   47  1192 0.996 110.22
 3.13 Intr - 171796 171692  105  1  0   90   89    67 0.993   7.41
 3.12 Intr - 173250 173148  103  2  1   63  103    23 0.923   1.48
 3.11 Intr - 174247 174161   87  0  0   78  116    92 0.999  10.09
 3.10 Intr - 176888 176818   71  2  2   91   80    65 0.985   3.98
 3.09 Intr - 178694 178453  242  0  2   71   45   445 0.936  35.77
 3.08 Intr - 180982 180821  162  2  0   60   58   176 0.906  11.75
 3.07 Intr - 181131 181086   46  0  1   62   78    12 0.929  -4.42
 3.06 Intr - 182047 181947  101  2  2  120   94    47 0.934   8.33
 3.05 Intr - 186625 186485  141  2  0   72   91   108 0.999   9.82
 3.04 Intr - 192225 192059  167  2  2   81   69   127 0.504   9.70
 3.03 Intr - 195372 195186  187  1  1   53    1   154 0.246   1.95
 3.02 Intr - 220559 220386  174  0  0   20   84   128 0.277   5.51
 3.01 Intr - 229921 229892   30  2  0  108   65    23 0.068   0.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:14903915_15143005|GENSCAN_predicted_peptide_1|1347_aa
ENLQKLVHIEHSVRGQGDLLQPGREFLKEGTLMKVTGKNRRPRHLFLMNDVLLYTYPQKD
GKYRLKNTLAVANMKALYHGEGEGGSTFLSMEVCSLLEPKAPPRSLLEKGMGDVVTGRYL
SNMTVHLGLPGLGPEHDALQPSQRWVSRPVMEKVPYALKIETSESCLMLSARLQVRKSKV
KALTDSVSAALGVRGISLFQCKKKQTQGQLMDQWSARKPSLAGDLFFAGGSGQCERCRLK
GHLSENLIHAEMEAHARSSCAERDEWYGCLSRALPEDYKAQALAAFHHSVEIRERLGVSL
GERPPTLVPVTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKV
CDGCFGELKKRGRAVPGLMRVTERPVSMSFPLSSPRFSGSAFSSVFQSINPSTFKKQKKV
PSALTEVAASGEGSAISGYLSRCKRGKRHWKKLWFVIKGKVLYTYMASEDKVALESMPLL
GFTIAPEKEEGSSEVGPIFHLYHKKTLFYSFKAEDTNSAQSHISARPAAAKAGGSYVAAA
ARGPTAHGPDGPSAGCGVPVRARASANRVLARPPPRRRGWRWEEEEEHSPSSYQRAGGGG
GGTGVTNSDLSLTKTITNPPFSATPAAPPGPSPPPRSHLGVSSLARCPASPRPPGSRHPP
TPGARAPRALPSAPGAARRRHGTRFEAALAPNPESAFGGRRSPTAVFSEGEGKRKGGRRV
RGATSTAYGCGSSERSSQVTRTQTSRPESPGMTSPSPRIQIISTDSAVASPQRIQIVTDQ
QTGQKIQIVTAVDASGSPKQQFILTSPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGR
IQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNL
TYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAASTE
KIYIRKDLRSPLIATPTFVADKDGARQTGLLDPGMLVNIQQPLIREDGTVLLATDSKAET
SQGALGTLANVVTSLANLSESLNNGDTSEIQPEDQSASEITRAFDTLAKALNTTDSSSSP
SLADGIDTSGGGSIHVISRDQSTPIIEVEGPLLSDTHVTFKLTMPSPMPEYLNVHYICES
ASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVN
HLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLT
STSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIGN
VSIDSIIPYILKMETAEYNGQITGASL

>gi568815595f:14903915_15143005|GENSCAN_predicted_CDS_1|4044_bp
gaaaacctgcagaagctggtccacattgagcacagcgtccggggccaaggggatctcctc
cagccaggaagggagtttctgaaggaagggacgctgatgaaagtaacagggaaaaacaga
cggccccggcacctatttctgatgaacgatgtgctcctgtacacctatccccagaaggat
gggaagtaccggctgaagaacacattggctgtggccaacatgaaggctctttaccatggg
gaaggggaaggaggaagcacctttctcagcatggaggtttgttcccttttggaaccaaag
gctccaccgaggagcctgttagaaaaaggcatgggagacgtggtcactggcaggtacttg
tccaacatgacagtgcacctggggttgcccgggctgggccctgagcatgacgctctgcag
ccttcccagcggtgggtcagccgccctgtgatggagaaagtgccctacgctctaaagatt
gagacttccgagtcctgcctgatgctgtctgcgaggctgcaggtcaggaagtccaaggtc
aaggcactgactgattcggtgtctgcagccctgggagttaggggaatatcattattccag
tgtaagaagaaacagacccaaggacagctaatggaccagtggtctgctcgtaaacctagt
ctggcaggtgatctcttctttgctggtggttctgggcagtgtgagaggtgcaggctcaag
gggcatctgagtgagaacctcatccatgccgagatggaggcccatgcccgcagctcctgt
gcagagagggacgagtggtatggctgtctgagcagagccctccctgaggactacaaggcc
caggcgctggctgcattccaccatagcgtggagatacgagagaggctgggggttagcctt
ggggagaggccccccaccctggtgcctgtcacacacgtcatgatgtgcatgaactgcggc
tgcgacttctccctcaccctgcggcgtcatcactgtcacgcctgtggcaagatcgtgtgc
cggaactgttcgcggaacaagtacccgctgaagtacctgaaggacaggatggccaaggtc
tgcgacggctgcttcggggagctgaagaagcggggcagggctgtcccgggcctgatgaga
gttacagagcggcctgtgagcatgagcttcccgctgtcttcaccccgcttctcgggcagt
gccttttcatccgtcttccagagcattaacccctcgaccttcaagaagcagaagaaagtc
ccttcagccctgacagaggtggctgcctctggagagggctctgccatcagtggctatctc
agccggtgtaagaggggcaagcggcactggaagaagctctggtttgtcatcaaaggcaaa
gttctctacacctacatggccagtgaggacaaagtggccttggagagtatgcctctgcta
ggcttcaccattgctccagaaaaggaagagggcagcagtgaagtaggacctatttttcac
ctttaccacaagaaaaccctattttatagcttcaaagcagaagataccaattcagctcag
agccacatatccgcccgcccggccgcggccaaggccggcggcagctacgtagccgccgcc
gcccggggccccacagcccacgggccggatggaccgagcgccggctgcggcgttccggtg
cgcgcgcgcgcctcagccaatcgcgttctcgcccgccccccgccgcggcggcgaggctgg
cgctgggaagaggaagaagaacattcgccctcctcctaccagcgcgcgggcggcggcggc
ggcggcaccggggtcacgaactctgacctttcactgacaaaaacaataacaaaccccccc
ttctccgcgaccccggcggcgcccccgggcccgtccccgccaccccgctcccacctcggc
gtctcgtctctcgcccgctgccccgcgagcccgcggcccccgggctcccgccatccgccg
acaccgggagcccgggctccccgcgccctgccctccgcgccgggggccgcccgccgcaga
cacgggacccgcttcgaggccgctttggcgccaaatcctgagtccgcctttggcggccgt
cgcagcccaaccgccgttttttctgaaggggagggtaaaagaaaaggaggaaggcgggtg
cgaggcgcgacctcgaccgcctatggctgcggtagcagtgagagaagctctcaggtaaca
cgtacacagacctctcggccggaatctccagggatgaccagcccctccccacgcatccag
ataatctccaccgactctgctgtagcctcacctcagcgcattcagattgtcacagaccag
cagacaggacagaaaatccagatagtcaccgcagtggacgcctccggatcccccaaacag
cagttcatcctgaccagcccagatggagctggaactgggaaggtgatcctggcttcccca
gagacatccagcgccaagcaactcatattcaccacctcagacaacctcgtccctggcagg
atccagattgtcacggattctgcctctgtggagcgtttactggggaagacggacgtccag
cggccccaggtggtagagtactgtgtggtctgtggcgacaaagcctccggccgtcactat
ggggctgtcagttgtgaaggttgcaaaggtttcttcaaaaggagtgtgaggaaaaatttg
acctacagctgccggagcaaccaagactgcatcatcaataaacatcaccggaaccgctgt
cagttttgccggctgaaaaaatgcttagagatgggcatgaaaatggaatctgtgcagagt
gaacggaagcccttcgatgtgcaacgggagaaaccaagcaattgtgctgcttcaactgag
aaaatctatatccggaaagacctgagaagtcccctgatagctactcccacgtttgtggca
gacaaagatggagcaagacaaacaggtcttcttgatccagggatgcttgtgaacatccag
cagcctttgatacgtgaggatggtacagttctcctggccacggattctaaggctgaaaca
agccagggagctctgggcacactggcaaatgtagtgacctcccttgccaacctaagtgaa
tctttgaacaacggtgacacttcagaaatccagccagaggaccagtctgcaagtgagata
actcgggcatttgataccttagctaaagcacttaataccacagacagctcctcttctcca
agcttggcagatgggatagacaccagtggaggagggagcatccacgtcatcagcagagac
cagtcgacacccatcattgaggttgaaggccccctcctttcagacacacacgtcacattt
aagctaacaatgcccagtccaatgccagagtacctcaacgtgcactacatctgtgagtct
gcatcccgtctgcttttcctctcaatgcactgggctcggtcaatcccagcctttcaggca
cttgggcaggactgcaacaccagccttgtgcgggcctgctggaatgagctcttcaccctc
ggcctggcccagtgtgcccaggtcatgagtctctccaccatcctggctgccattgtcaac
cacctgcagaacagcatccaggaagataaactttctggtgaccggataaagcaagtcatg
gagcacatctggaagctgcaggagttctgtaacagcatggcgaagctggatatagatggc
tatgagtatgcataccttaaagctatagttctctttagccccgatcatccaggtttgacc
agcacaagccagattgaaaaattccaagaaaaggcacagatggagttgcaggactatgtt
cagaaaacctactcagaagacacctaccgattggcccggatcctcgttcgcctgccggca
ctcaggctgatgagctccaacataacagaagaacttttttttactggtctcattggcaat
gtttcgatagacagcataatcccctacatcctcaagatggagacagcagagtataatggc
cagatcaccggagccagtctatag

>gi568815595f:14903915_15143005|GENSCAN_predicted_peptide_2|173_aa
MPMKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNP
WVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEEK
KQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMRGKYKAALKADAQD

>gi568815595f:14903915_15143005|GENSCAN_predicted_CDS_2|522_bp
atgcccatgaagggccgcttccccatccgccgcaccctgcaatatctgagccaggggaac
gtggtgttcaaggactccgtgaaggtcatgacagtgaattacaacacgcatggggagctg
ggcgagggcgccaggaagtttgtgtttttcaacatacctcagattcaatacaaaaaccct
tgggtgcagatcatgatgtttaagaacatgacgccgtcacccttcctgcgattctactta
gattctggggagcaggtcctggtggatgtggagaccaagagcaataaggagatcatggag
cacatcagaaaaatcttggggaagaatgaggaaaccctcagggaagaggaggaggagaaa
aagcagctttctcacccagccaacttcggccctcgaaagtactgcctgcgggagtgcatc
tgtgaagtggaagggcaggtgccctgccccagcctggtgccattacccaaggagatgagg
gggaagtacaaagccgctctgaaagccgatgcccaggactaa

>gi568815595f:14903915_15143005|GENSCAN_predicted_peptide_3|921_aa
XSPEKEQRDRATSANESNVDFLSLPDTTSPEIRLDHSPPVPDRSISALEHIPQTFPKPGT
GLHTSTPSSPAQKPPARPPLFESVSALFAPSKTRRSTGVYQLVFRFRRRRRRTCRVPSDR
WRWRLRLSDGRVESGTAMASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRD
VKGQIKSLVQKAKKAKDRLLKREGDDRAESGTQGYESFSYGGVDPYMWEPQELGAVRSHL
SDFKKHRAARIDHYVVEVNKLIIRLEKLTAFDRTNTESAKIRAIEKSVVPWVNDQDVPFC
PDCGNKFSIRNRRHHCRLCGSIMCKKCMELISLPLANKLTSASKESLSTHTSPSQSPNSV
HGSRRGSISSMSSVSSVLDEKDDDRIRCCTHCKDTLLKREQQIDEKEHTPDIVKLYEKLR
LCMEKVDQKAPEYIRMAASLNAGETTYSLEHASDLRVEVQKVYELIDALSKKILTLGLNQ
DPPPHPSNLRLQRMIRYSATLFVQEKLLGLMSLPTKEQFEELKKKRKEEMERKRAVERQA
ALESQRRLEERQSGLASRAANGEVASLRRGPAPLRKAEGWLPLSGGQGQSEDSDPLLQQI
HNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQQTEKAIELSRRQAEEEDLQREQLQ
MLRERELEREREQFRVASLHTRTRSLDFREIGPFQLEPSREPRTHLAYALDLGSSPVPSS
TAPKTPSLSSTQPTRVWSGPPAVGQERLPQSSMPQQHEGPSLNPFDEEDLSSPMEEATTG
PPAAGVSLDPSARILKEYNPFEEEDEEEEAVAGNPFIQPDSPAPNPFSEEDEHPQQRLSS
PLVPGNPFEEPTCINPFEMDSDSGPEAEEPIEEELLLQQIDNIKAYIFDAKQCGRLDEVE
VLTENLRELKHTLAKQKGGTD

>gi568815595f:14903915_15143005|GENSCAN_predicted_CDS_3|2766_bp
ngttctccagagaaagagcagagagatagagcaacctcagccaatgagtccaatgtcgac
ttcctgtccttgcctgacactaccagccctgagatcagacttgaccattcacctccagta
cctgataggtccatcagtgctttggaacatatcccacaaacattccccaaaccaggcacc
ggactccacacatcaacaccgtcatcgcctgcgcagaagccgccggcccgccctccacta
ttcgaatccgtatccgcccttttcgcgccctcgaagactcggcgctcgacaggcgtctac
cagcttgtcttccggtttcgtcgccgccgcaggcgcacctgccgagttccgagcgaccga
tggagatggcggctgcggctgagtgacggacgggttgagagcggcactgccatggcttct
ctggacgacccaggggaagtgagggagggcttcctctgccctctgtgcctgaaggatctg
cagtctttctatcagcttcactcacattacgaggaagaacactcaggggaagaccgtgat
gtcaaagggcaaattaaaagtcttgtccagaaggctaaaaaagcaaaggacaggttgttg
aaacgagaaggggatgatcgagcagagtcagggacccaaggatatgagtctttcagctat
ggaggggttgatccttacatgtgggaaccccaggagcttggtgctgtgagaagccatctt
tccgacttcaaaaaacaccgagctgctagaattgaccactatgttgtggaagtcaataaa
ctaataatcaggttagagaagctcactgcatttgacagaacaaatactgagtctgcaaag
attcgagcaatagaaaagtctgtggtgccttgggtcaacgaccaggatgtccctttctgt
ccagactgtgggaataagttcagcatccggaaccgccgccaccactgccgcctctgcggg
tctattatgtgcaagaagtgtatggagctcatcagccttcccttggcaaacaagctcacc
agtgccagcaaggagtccctgagcacccacaccagccccagccagtcacccaacagtgtc
catggctcccgccgaggcagcatcagcagcatgagcagtgtcagctcggtcctggatgag
aaggacgatgaccggatccgctgctgtacacactgcaaggacacgctgctcaagagagag
cagcagattgatgagaaggagcacacacctgacatcgtgaagctctacgagaaattacga
ctttgcatggagaaagttgaccagaaagctccagaatacatcaggatggcagcatcatta
aatgctggggagacaacctacagtctggaacatgccagtgaccttcgagtggaagtgcag
aaagtgtatgagctgatagacgctttaagtaagaagatcttaaccttgggcttgaaccag
gaccctccaccacatccaagcaatttgcggctgcagagaatgatcagatactcagctaca
ctttttgtgcaggaaaagttgcttggtttgatgtcactgccaaccaaagaacagtttgag
gaactgaaaaagaaaaggaaggaggaaatggagaggaagagggccgtggagagacaagct
gccctggagtcccagcgaaggcttgaggaaaggcagagtggcctggcttctcgagcggcc
aacggggaggtggcatctctccgcaggggccctgcccccttgagaaaggctgagggctgg
ctcccactgtcaggaggtcaggggcagagtgaggactcagacccgctcctccagcagatc
cacaacatcacatcattcatcaggcaggccaaggccgcgggccgcatggatgaagtgcgc
actctgcaggagaacctgcggcagctgcaggacgagtatgaccagcagcagacagagaag
gccatcgagctgtcccggaggcaggctgaggaggaggacctgcagcgggaacagctgcag
atgttgcgtgaacgggagttggaacgagaaagggagcagtttcgggtggcatccctgcac
acacggactcggtccctggacttcagagaaatcggcccttttcagctggagcccagcaga
gagcctcgcacccaccttgcttatgctttggatctaggctcttccccagttccaagcagc
acagctcccaagaccccttcacttagctcaactcaacccaccagagtgtggtctgggccc
ccagccgttggccaggagcgcttaccccagagcagcatgccacagcaacatgaggggccc
tccttaaacccctttgatgaggaagacctctccagccccatggaagaggccactactggt
cctcctgctgcaggggtttccttagacccttcagcccgcatcctgaaagagtacaatcct
ttcgaggaagaggacgaggaggaggaagcagtggcagggaatccattcattcagccagac
agcccagctcctaaccccttcagtgaggaagacgaacatccccagcagaggctctcaagc
cctctggttcctggtaacccctttgaggaacccacctgtatcaacccctttgagatggac
agtgacagtgggccagaggctgaggagcccatagaggaagagctcctcctgcagcagatc
gataacatcaaggcatacatctttgatgccaagcagtgcggccgcctggatgaggtagag
gtgctgacagagaatctgcgggagctgaagcacaccctggccaagcagaaggggggcact
gactga