Result of FASTA (omim) for pF1KB5280
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5280, 246 aa
  1>>>pF1KB5280 246 - 246 aa - 246 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6950+/-0.000398; mu= 13.4319+/- 0.025
 mean_var=86.5854+/-17.365, 0's: 0 Z-trim(112.3): 77  B-trim: 551 in 1/55
 Lambda= 0.137833
 statistics sampled from 21151 (21218) to 21151 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.249), width:  16
 Scan time:  6.310

The best scores are:                                      opt bits E(85289)
NP_003396 (OMIM: 113508) 14-3-3 protein eta [Homo  ( 246) 1571 322.2 5.2e-88
NP_036611 (OMIM: 605356) 14-3-3 protein gamma [Hom ( 247) 1387 285.6 5.4e-77
XP_005251118 (OMIM: 601288) PREDICTED: 14-3-3 prot ( 245) 1157 239.9 3.1e-63
NP_663723 (OMIM: 601288) 14-3-3 protein zeta/delta ( 245) 1157 239.9 3.1e-63
NP_001129171 (OMIM: 601288) 14-3-3 protein zeta/de ( 245) 1157 239.9 3.1e-63
NP_001129174 (OMIM: 601288) 14-3-3 protein zeta/de ( 245) 1157 239.9 3.1e-63
XP_005251120 (OMIM: 601288) PREDICTED: 14-3-3 prot ( 245) 1157 239.9 3.1e-63
XP_016869300 (OMIM: 601288) PREDICTED: 14-3-3 prot ( 245) 1157 239.9 3.1e-63
XP_016869299 (OMIM: 601288) PREDICTED: 14-3-3 prot ( 245) 1157 239.9 3.1e-63
NP_001129172 (OMIM: 601288) 14-3-3 protein zeta/de ( 245) 1157 239.9 3.1e-63
NP_003397 (OMIM: 601288) 14-3-3 protein zeta/delta ( 245) 1157 239.9 3.1e-63
NP_001129173 (OMIM: 601288) 14-3-3 protein zeta/de ( 245) 1157 239.9 3.1e-63
XP_016883528 (OMIM: 601289) PREDICTED: 14-3-3 prot ( 246) 1150 238.5 8.3e-63
NP_647539 (OMIM: 601289) 14-3-3 protein beta/alpha ( 246) 1150 238.5 8.3e-63
NP_003395 (OMIM: 601289) 14-3-3 protein beta/alpha ( 246) 1150 238.5 8.3e-63
NP_006817 (OMIM: 609009) 14-3-3 protein theta [Hom ( 245) 1107 229.9 3.1e-60
NP_006133 (OMIM: 601290) 14-3-3 protein sigma [Hom ( 248) 1012 211.1 1.5e-54
XP_005256841 (OMIM: 605066) PREDICTED: 14-3-3 prot ( 240)  989 206.5 3.5e-53
NP_006752 (OMIM: 605066) 14-3-3 protein epsilon [H ( 255)  986 205.9 5.6e-53
XP_016880494 (OMIM: 605066) PREDICTED: 14-3-3 prot ( 218)  889 186.6 3.2e-47
XP_016883529 (OMIM: 601289) PREDICTED: 14-3-3 prot ( 106)  453 99.6 2.3e-21


>>NP_003396 (OMIM: 113508) 14-3-3 protein eta [Homo sapi  (246 aa)
 initn: 1571 init1: 1571 opt: 1571  Z-score: 1701.0  bits: 322.2 E(85289): 5.2e-88
Smith-Waterman score: 1571; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:1-246)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDE
              190       200       210       220       230       240

             
pF1KB5 EAGEGN
       ::::::
NP_003 EAGEGN
             

>>NP_036611 (OMIM: 605356) 14-3-3 protein gamma [Homo sa  (247 aa)
 initn: 1387 init1: 1387 opt: 1387  Z-score: 1503.3  bits: 285.6 E(85289): 5.4e-77
Smith-Waterman score: 1387; 87.0% identity (95.9% similar) in 246 aa overlap (1-246:1-246)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
       : :::::.:.::::::::::::::.::: :::::::::::.:::::::::::::::::::
NP_036 MVDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       :::::::::: :::::::.: :.:::::::::::.::.:::::::..:::::.. :::::
NP_036 RVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:::. .:::.:: ::.:: :::::.::::::::::::::.:
NP_036 VFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDE
       :::::::::::::: ::: ::::::::::::::::::::::::::::::::::::::::.
NP_036 VFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDD
              190       200       210       220       230       240

              
pF1KB5 EAGEGN 
       ..:::: 
NP_036 DGGEGNN
              

>>XP_005251118 (OMIM: 601288) PREDICTED: 14-3-3 protein   (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
XP_005  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
XP_005 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
XP_005 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
XP_005 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
XP_005 EAEAGEGGEN
         240     

>>NP_663723 (OMIM: 601288) 14-3-3 protein zeta/delta [Ho  (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
NP_663  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
NP_663 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
NP_663 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
NP_663 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
NP_663 EAEAGEGGEN
         240     

>>NP_001129171 (OMIM: 601288) 14-3-3 protein zeta/delta   (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
NP_001  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
NP_001 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
NP_001 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
NP_001 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
NP_001 EAEAGEGGEN
         240     

>>NP_001129174 (OMIM: 601288) 14-3-3 protein zeta/delta   (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
NP_001  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
NP_001 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
NP_001 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
NP_001 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
NP_001 EAEAGEGGEN
         240     

>>XP_005251120 (OMIM: 601288) PREDICTED: 14-3-3 protein   (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
XP_005  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
XP_005 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
XP_005 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
XP_005 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
XP_005 EAEAGEGGEN
         240     

>>XP_016869300 (OMIM: 601288) PREDICTED: 14-3-3 protein   (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
XP_016  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
XP_016 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
XP_016 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
XP_016 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
XP_016 EAEAGEGGEN
         240     

>>XP_016869299 (OMIM: 601288) PREDICTED: 14-3-3 protein   (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
XP_016  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
XP_016 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
XP_016 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
XP_016 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
XP_016 EAEAGEGGEN
         240     

>>NP_001129172 (OMIM: 601288) 14-3-3 protein zeta/delta   (245 aa)
 initn: 1019 init1: 668 opt: 1157  Z-score: 1256.1  bits: 239.9 E(85289): 3.1e-63
Smith-Waterman score: 1157; 75.5% identity (89.4% similar) in 245 aa overlap (3-245:2-242)

               10        20        30        40        50        60
pF1KB5 MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
         :...:.:.:.::::::::::::. ::.::: .  ::::.:::::::::::::::::::
NP_001  MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSW
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
       ::.:::::::  .: ::: . .. :::::: ::. .::::::::.:::: : .  : :::
NP_001 RVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNAS--QAESK
      60          70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
       ::::::::::::::::::.:. :...:. :. ::.:::::::..::::::::::::::::
NP_001 VFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFS
         120       130       140       150       160       170     

              190       200       210       220       230          
pF1KB5 VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ-D
       :::::: :.::.:: ::: :::.::::::::.:.:::::::::::::::::::::: : :
NP_001 VFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGD
         180       190       200       210       220       230     

     240         
pF1KB5 E-EAGEGN  
       : :::::   
NP_001 EAEAGEGGEN
         240     




246 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 16:30:25 2016 done: Thu Nov  3 16:30:26 2016
 Total Scan time:  6.310 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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