GENSCAN 1.0	Date run:  3-Nov-116	Time: 16:30:55

Sequence gi568815576f:31844734_32056789 : 212056 bp : 46.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    285    504  220  0  1  113   90   352 0.999  36.20
 1.02 Intr +   2101   2234  134  0  2   96  100    42 0.876   5.64
 1.03 Intr +  12712  12820  109  1  1  134   98    86 0.972  14.49
 1.04 Intr +  16635  16700   66  2  0   92   92    56 0.924   5.50
 1.05 Intr +  25857  26011  155  2  2   73   94    99 0.937   7.87
 1.06 Intr +  28522  28599   78  1  0   80   99    62 0.940   5.17
 1.07 Intr +  29540  29672  133  2  1   52   94   181 0.979  15.75
 1.08 Intr +  31424  31532  109  1  1   56   50   175 0.556  10.36
 1.09 Intr +  34792  34959  168  2  0   88   32   187 0.365  13.02
 1.10 Intr +  48864  49018  155  1  2   58   81   228 0.512  18.89
 1.11 Intr +  52749  52920  172  2  1   78   55   130 0.786   8.22
 1.12 Intr +  57009  57069   61  1  1  104   72    62 0.666   3.99
 1.13 Intr +  61251  61333   83  0  2  109   94    18 0.175   3.78
 1.14 Intr +  61472  61760  289  0  1  101   58   570 0.295  51.60
 1.15 Term +  72757  72832   76  1  1  134   46    47 0.567   2.41
 1.16 PlyA +  73558  73563    6                               1.05

 2.03 PlyA -  77782  77777    6                               1.05
 2.02 Term -  81281  81157  125  0  2   79   42    56 0.266  -1.35
 2.01 Init -  83481  83430   52  0  1   77  115    32 0.625   6.12
 2.00 Prom -  86501  86462   40                              -1.86

 3.00 Prom +  89137  89176   40                              -4.26
 3.01 Init + 100001 100087   87  1  0   98   89   230 0.999  24.74
 3.02 Term + 111406 112059  654  0  0   86   49  1025 0.995  92.40
 3.03 PlyA + 112558 112563    6                               1.05

 4.04 PlyA - 112717 112712    6                               1.05
 4.03 Term - 118046 117927  120  2  0   -2   48   125 0.141  -2.03
 4.02 Intr - 123569 123517   53  0  2  127   81    27 0.169   4.53
 4.01 Init - 139287 139146  142  0  1   86   80    60 0.553   5.30
 4.00 Prom - 159059 159020   40                              -2.46

 5.06 PlyA - 159868 159863    6                               1.05
 5.05 Term - 180547 180395  153  1  0   60   55   127 0.843   4.52
 5.04 Intr - 186944 186889   56  0  2   91   69    57 0.840   2.80
 5.03 Intr - 189952 189799  154  1  1   65   49   110 0.372   4.45
 5.02 Intr - 191007 190832  176  1  2   39   20   103 0.556  -1.74
 5.01 Init - 191148 191049  100  0  1   70   78    31 0.620   0.73
 5.00 Prom - 192069 192030   40                              -6.46

 6.00 Prom + 192910 192949   40                              -4.66
 6.01 Init + 194756 195109  354  1  0   90   43   552 0.953  48.04
 6.02 Intr + 195944 196127  184  1  1   94   80   114 0.564  10.56
 6.03 Intr + 198505 198683  179  2  2  -51   59   327 0.210  15.54
 6.04 Intr + 205210 205281   72  0  0   94  131    30 0.837   7.50
 6.05 Term + 205678 205737   60  0  0   96   40    41 0.566  -2.10
 6.06 PlyA + 209446 209451    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:31844734_32056789|GENSCAN_predicted_peptide_1|669_aa
XLIESLKFWRTRFLLLPACVTATKRITEGEAHCDIYGDRPRADEDEWQLLDGFVRFVEGL
NRIRRRHRSDRMMRKGTAMKGLQMTGPISTHSLESTAPPVGKKGTSALSALLEMEASQKC
LGEQQAAVHGGKSSAQSAESSSVAMTPTYMDSPRKDGAFFMEFVRSPRTASSAFYPQVSV
DQTATPMLDGTSLGICTGQSMDRGNSQTFGNSQNIGEQGYSSTNSSDSSSQQLVASSLTS
SSTLTEILEAMKHPSTGVQLLSEQKGLSPYCFISAEVVHWLVNHVEGIQTQAMAIDIMQK
MLEEQLITHASGEAWRTFIYGFYFYKIVTDKEPDRVAMQQPATTWHTAGVDDFASFQRKW
FEVAFVAEELVHSEIPAFLLPWLPSRPASYAKQRTVTLDVDVNNRTDRLEWCSCYYHGNF
SLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQ
LFIPLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAEN
KPQYIHVTGTVFLQLPYSKRKFSGQQRRRRNSTSSTNQNMFCEERVGYNWAYNTMLTKTW
RSSATGDEKFADRLLKDFTDFCINRDNRLVTFWTSCLEKMHASAPNQESGCHHWKPDWRT
TEKLASSGV

>gi568815576f:31844734_32056789|GENSCAN_predicted_CDS_1|2010_bp
nncttaattgagtccctgaagttctggaggacccgcttcctgctgctgccagcctgtgtc
accgccaccaagcgcatcacggagggggaggcccactgcgacatctatggggacaggccc
cgtgcagacgaggacgagtggcaactcctggatggttttgtccgctttgtggagggcttg
aatcgcattcgcaggcggcatcgctcggatcgcatgatgcggaaagggaccgccatgaaa
ggcttgcagatgactgggcccatttccacgcattctctggagtcaactgcacccccagtg
gggaagaagggaacctcagctctctctgccctgttggagatggaggccagtcagaagtgc
ctgggagaacagcaggcagctgtgcatggtgggaagagctccgcccagtcagccgagagc
agcagcgttgccatgactcccacctacatggacagcccacgaaaggacggggccttcttt
atggagtttgtccgcagcccacgcacagcatcgtccgccttctaccctcaggtatctgtg
gaccaaacagccactcctatgttggacggcaccagtttgggcatatgcacaggccaatcc
atggacagaggcaacagccagacctttgggaactcccagaacataggagaacagggctac
tcctccacaaactccagtgacagcagctctcagcagctggtggcaagctccttgacctca
tcctctaccctgacagagatcctggaagccatgaagcacccctcgacaggagtccagctg
ctctctgaacagaagggcctctcaccgtactgcttcatcagcgcggaggtggtacactgg
ttggtgaaccacgtggaggggatccagacacaggcgatggccattgacatcatgcagaaa
atgctggaagagcagctcatcacacatgcatctggcgaagcctggcggaccttcatctac
ggcttctatttctacaagatagtaacggacaaagagcccgaccgagtggccatgcagcag
cccgccaccacctggcacacagcaggagtggacgacttcgccagcttccagcgcaagtgg
tttgaggtggcctttgtggcagaagagctcgtgcactctgagattcctgcctttctcctg
ccctggctgcctagccggccagcctcctatgcaaagcagaggactgtgaccctggatgtt
gacgtgaacaaccgcacagaccggctggagtggtgcagctgttattaccatggcaacttt
tctctgaatgcagcctttgagatcaagctgcactggatggcggtgaccgcagcagtactc
ttcgagatggtccaaggttggcatcggaaagccacctcctgtggcttcttgttagtccca
gttttggaggggccttttgcactgcccagttacctgtatggcgacccccttcgtgcccag
ctcttcatcccactcaacatcagctgcttgctcaaggagggcagcgagcacctgtttgat
agctttgaacccgaaacgtactgggatcgaatgcacctcttccaggaagccattgcacac
aggtttgggtttgtacaagataaatattctgcctctgcttttaacttccctgctgagaac
aagcctcagtatatccacgttacaggaacagtgtttctgcagctgccctactccaagcgc
aagttctcagggcagcagcggcggcggcggaactccaccagctccaccaaccagaacatg
ttctgcgaggagcgggtcggctacaactgggcctacaacaccatgctcaccaaaacatgg
cgctccagcgccacaggggatgaaaagtttgctgatcggctgctgaaggacttcacggac
ttctgcatcaaccgtgacaaccggctggtcacgttctggacaagttgcctggagaagatg
catgccagtgccccgaaccaggagagtggctgccaccactggaagccagattggaggaca
acagagaaactggccagctctggggtctga

>gi568815576f:31844734_32056789|GENSCAN_predicted_peptide_2|58_aa
MHAQHSFKHTETVKPIAVQGSIMNFLDIYIGFPQASGFHTCSSHPPLPSSVTTAKIIS

>gi568815576f:31844734_32056789|GENSCAN_predicted_CDS_2|177_bp
atgcatgcccagcacagcttcaagcacacagaaacagtaaaaccgattgcagtccaaggt
tccatcatgaatttcctggacatctacattggcttcccacaggcctccggctttcacact
tgctcatcccatcccccgcttccatcttctgtaaccacagccaaaataatctcttaa

>gi568815576f:31844734_32056789|GENSCAN_predicted_peptide_3|246_aa
MGDREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSW
RVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESK
VFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFS
VFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDE
EAGEGN

>gi568815576f:31844734_32056789|GENSCAN_predicted_CDS_3|741_bp
atgggggaccgggagcagctgctgcagcgggcgcggctggccgagcaggcggagcgctac
gacgacatggcctccgctatgaaggcggtgacagagctgaatgaacctctctccaatgaa
gatcgaaatctcctctctgtggcctacaagaatgtggttggtgccaggcgatcttcctgg
agggtcattagcagcattgagcagaaaaccatggctgatggaaacgaaaagaaattggag
aaagttaaagcttaccgggagaagattgagaaggagctggagacagtttgcaatgatgtc
ctgtctctgcttgacaagttcctgatcaagaactgcaatgatttccagtatgagagcaag
gtgttttacctgaaaatgaagggtgattactaccgctacttagcagaggtcgcttctggg
gagaagaaaaacagtgtggtcgaagcttctgaagctgcctacaaggaagcctttgaaatc
agcaaagagcagatgcaacccacgcatcccatccggctgggcctggccctcaacttctcc
gtgttctactatgagatccagaatgcacctgagcaagcctgcctcttagccaaacaagcc
ttcgatgatgccatagctgagctggacacactaaacgaggattcctataaggactccacg
ctgatcatgcagttgctgcgagacaacctcaccctctggacgagcgaccagcaggatgaa
gaagcaggagaaggcaactga

>gi568815576f:31844734_32056789|GENSCAN_predicted_peptide_4|104_aa
MNKFQINNKEFVRAKEKSSQRHNCYPFGNVMASRKGPRPKARSGMTPGVGLEMRATKYAV
PGNQLANVKKVIEQRLPGKEERGLIKEDLEWQAFSPCLEDNIAS

>gi568815576f:31844734_32056789|GENSCAN_predicted_CDS_4|315_bp
atgaacaagttccagataaacaataaggaatttgtcagggcaaaagagaagagctcccaa
agacacaactgttacccctttgggaacgttatggccagcaggaaaggcccaagacccaag
gcaagatctgggatgacgccaggtgtaggcctggaaatgagagctacaaagtatgctgtc
cctgggaaccagctggcgaatgtaaagaaggtgattgagcaaaggctacctggcaaggaa
gaaagaggtcttatcaaggaagacctggagtggcaggctttcagcccctgtcttgaagac
aacatcgcatcatga

>gi568815576f:31844734_32056789|GENSCAN_predicted_peptide_5|212_aa
MHVSFGLEPEPRLLELPHPLDLKSQTGFREEPWEPFTGNCLNTVLNLGQQEECVGWKSEA
CVQEPVPLALGKSFPSLKLSPHLSNLAEFDQQFDTWTQLYESERHFNESLIITNAGKSQQ
CNVGIIVCQTPWFSENSEPRMRAGCQRFRFHPEPESDTAGDVCEESVILGGCRNPKPDVC
LTQVLKELALKDPHQQLPVLKKYKQFSHIRHV

>gi568815576f:31844734_32056789|GENSCAN_predicted_CDS_5|639_bp
atgcatgtcagctttggattggaaccagagcccaggttactggaactgcctcatcctcta
gacctcaaatcccagactggcttcagagaggagccatgggagcccttcacagggaactgc
ctcaacactgtcctcaatctggggcaacaggaagaatgtgttgggtggaagtcggaggcc
tgtgttcaagagccggttcctctggccttaggcaagtcatttccctctctgaaactgtct
ccgcacctgtcaaatttggcagaatttgaccagcagtttgacacttggacccagctgtac
gaaagtgagaggcatttcaatgagtcattaattataacaaatgcaggcaaaagtcagcag
tgtaatgtaggcatcatcgtctgccaaacaccttggttttctgaaaactcagagcccagg
atgagagcaggctgtcaacgcttcaggttccatccagaacctgagtctgacacagctgga
gatgtgtgtgaagagtctgttattcttggaggttgtagaaatccaaaacctgatgtatgc
ctgactcaggtattaaaggaactggccctcaaggaccctcaccagcagctacctgtgctc
aagaagtacaagcagttctcccatatcaggcatgtatga

>gi568815576f:31844734_32056789|GENSCAN_predicted_peptide_6|282_aa
MCRVCTKTVKKAARVIIEKYYTRLGNDFHTNKRVCKEIAIIPSKKLRNKIAGYVTHLMKW
IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQPH
LSCGLSVWLAFFFLGCSANKGPFSDQILVLIGTNDGKRESNRILPVSSDPAAQASCMGAG
ASGPGEREGRNAATMDSSTWSPKTTAVTRPVETHELIRNAADISIIVIYFVVVMAVGLWA
MFSTNRGTVGGFFLAGRSMVWWPEEWAAEKLLEEGTTCIDLG

>gi568815576f:31844734_32056789|GENSCAN_predicted_CDS_6|849_bp
atgtgccgcgtttgcaccaaaaccgtgaagaaggcggcccgggtcatcatagaaaagtac
tacacacgcctgggcaacgacttccacacgaacaagcgcgtgtgcaaggagatcgccatt
atccccagcaagaagctccgcaacaagatagcaggctatgtcacgcatctgatgaaatgg
attcagagaggcccagtaagaggtatctccatcaagctgcaggaggaggagagagaaagg
agagacaattatgttcctgaggtctcagccttggatcaggagataattgaagtagatcct
gacactaaggaaatgctgaagcttttggacttcggcagtctgtccaacctgcagcctcat
ctttcctgcggcctgagtgtctggctggcttttttctttctcgggtgttctgctaacaag
ggcccctttagtgaccagatcctggttttgattggcaccaatgacggcaagagagagtcc
aacaggatcctaccagtgagcagtgacccagcagctcaggccagctgcatgggagcagga
gctagcggccctggcgagagggaaggacgcaacgctgccaccatggacagtagcacctgg
agccccaagaccaccgcggtcacccggcctgttgagacccacgagctcattcgcaatgca
gccgatatctccatcatcgttatctacttcgtggtagtgatggccgtcggactgtgggct
atgttttccaccaatcgtgggactgttggaggcttcttcctggcaggccgaagtatggtg
tggtggccggaagagtgggcagcagagaagcttctggaagaaggaacaacttgtattgac
ctgggttga