GENSCAN 1.0	Date run:  3-Nov-116	Time: 16:23:13

Sequence gi568815581f:32250286_32469756 : 219471 bp : 45.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8522   8646  125  1  2   63   53   238 0.932  15.47
 1.02 Intr +   9298   9334   37  1  1  108   86    30 0.973   3.06
 1.03 Intr +  12268  12478  211  0  1   82   65   111 0.180   6.69
 1.04 Intr +  15867  16015  149  1  2  -77   86   289 0.461  12.15
 1.05 Intr +  17617  17640   24  0  0   81   91    23 0.228   0.12
 1.06 Intr +  27489  27674  186  2  0   46   81    57 0.054   0.69
 1.07 Intr +  31870  31965   96  0  0   49   81    68 0.724   2.41
 1.08 Intr +  34374  34532  159  2  0  110   75   220 0.990  23.08
 1.09 Intr +  38507  38743  237  1  0  114   35   377 0.993  32.81
 1.10 Intr +  44009  44157  149  1  2  100   96    82 0.871   9.23
 1.11 Intr +  47807  47919  113  2  2   93   96   165 0.943  17.82
 1.12 Intr +  55056  55156  101  1  2   85   89    78 0.122   7.43
 1.13 Intr +  64616  64708   93  1  0   89   65    32 0.027   1.16
 1.14 Intr +  65947  66007   61  0  1  100   86    74 0.043   6.71
 1.15 Term +  70673  70944  272  0  2  141   55   422 0.997  39.85
 1.16 PlyA +  71623  71628    6                               1.05

 2.10 PlyA -  77544  77539    6                               1.05
 2.09 Term -  81603  81478  126  0  0   26   43   121 0.518  -0.32
 2.08 Intr -  83235  83132  104  1  2   60   86    22 0.785  -0.91
 2.07 Intr -  84320  84184  137  1  2   48   99   137 0.898  11.01
 2.06 Intr -  84554  84490   65  2  2   85  103    45 0.925   3.22
 2.05 Intr -  88066  87961  106  0  1  115   14    86 0.715   4.12
 2.04 Intr -  89653  89528  126  0  0    8  106    82 0.697   1.79
 2.03 Intr -  90999  90919   81  2  0   55   98    50 0.668   1.45
 2.02 Intr -  91998  91715  284  0  2   31   53   228 0.464   9.82
 2.01 Init -  93626  93420  207  2  0   40   78    64 0.349  -0.50
 2.00 Prom -  94818  94779   40                              -4.56

 3.00 Prom + 105213 105252   40                              -8.16
 3.01 Init + 105456 105512   57  2  0   48   64    40 0.462  -1.09
 3.02 Intr + 108218 108356  139  1  1   45   94   140 0.972  10.34
 3.03 Intr + 110313 110480  168  1  0   57   69   111 0.924   6.02
 3.04 Intr + 115045 115202  158  2  2  122  110    41 0.996   9.43
 3.05 Intr + 117487 117694  208  0  1   52  100   112 0.612   7.45
 3.06 Intr + 122517 122628  112  1  1   48   96    94 0.454   5.64
 3.07 Term + 138351 138375   25  0  1  106   47    35 0.338  -1.10
 3.08 PlyA + 142668 142673    6                               1.05

 4.00 Prom + 158547 158586   40                              -2.36
 4.01 Init + 178702 178837  136  0  1   73   38   156 0.509   9.40
 4.02 Intr + 196660 196761  102  2  0   52  111    95 0.993   8.35
 4.03 Intr + 204210 204334  125  1  2   95  107    73 0.998  10.20
 4.04 Intr + 213764 213835   72  1  0  113   92    17 0.938   4.20
 4.05 Intr + 214236 214293   58  2  1  129  106    36 0.995   7.96
 4.06 Intr + 218714 218908  195  0  0   92   59   253 0.603  22.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  55056  55225  170  1  2   85   36   134 0.806   5.94
S.002 Init +  65959  66007   49  0  1   73   86   119 0.953   9.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:32250286_32469756|GENSCAN_predicted_peptide_1|670_aa
MELQDVLLLLLLMLMLLLRPHHQKACLVDPTSFFAAAPHWSSLLDTLVPGSVQWPFILLC
VDFKCLVRNLKRGHGVAHLQNEEQGRSANRPSSVSLLISAKGSPREGPLHGTPPGIDECL
PAAAAPQPPPPPDPVSAMGEHPSPGPAVAACAEAERIEELEPEAEERLPAAPEDHWKVLF
DQSVPSSVTVKKYYDQRSNKFEECWAEQNQTGFSSLKPCRVLDMVRYDPPRGFSTCRTTE
PLFQIFTEQQVGEFPEILGVVNQTDVIHETWHFGLKFDPGNTGYISTGKFRSLLESHSSK
LDPHKREVLLALADSHADGQIGYQDFVSLMSNKRSNSFRQAILQGNRRLSSKALLEEKGL
SLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITVTLLEARTRVAFFLYNGVSLG
QFVLQVTHPRYLKNSLVYHPQLRAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVH
GATRIGLVYVAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMHGTCRQAKTGF
PPKAGPQVAHTSLSVKKGLLNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRFHPSAYPP
CPHPSFVAHLGGVAVGITLGVVVLRNYEQRLQDQSLWWIFVAMYTVFVLFAVFWNIFAYT
LLDLKLPPPP

>gi568815581f:32250286_32469756|GENSCAN_predicted_CDS_1|2013_bp
atggagctccaggatgtcttgctgctgctgctgctgatgctgatgctgctgctgcggcct
caccatcaaaaagcctgcctcgtggaccccacgtcattcttcgctgcagcccctcactgg
agcagtctgttggacactctggtgcctggttctgtgcagtggcccttcatcctgctctgc
gttgacttcaagtgtcttgttaggaaccttaaaagaggccatggtgtagcgcacttgcaa
aatgaagagcaaggaagaagtgccaataggcccagttccgtgtcacttctcattagcgcc
aaaggttctcccagggaggggcctctgcatggcacacctccaggcatcgacgagtgcctg
cctgctgcagctgccccgcagccgccgccgcccccggaccccgtctcggccatgggcgag
caccccagcccgggccccgcggtggccgcctgcgccgaggcggagcgcatcgaggagctg
gaacccgaggccgaggagcggctgcccgcggcgccggaggaccactggaaagtcctgttt
gatcagagtgttccatcaagtgttactgtgaaaaaatactacgaccaaaggtcaaataag
tttgaagaatgctgggctgaacaaaatcagacaggtttctccagcctaaaaccttgcaga
gtccttgatatggtgcgttatgaccctccaagaggtttttccacttgtaggaccacagaa
cccttatttcagatctttactgagcaacaagtaggtgagtttcctgaaatacttggtgtt
gtgaaccaaacagatgtcatccatgaaacctggcattttggcttgaagtttgaccctggg
aacacaggctacattagcacaggcaagttccggagtcttctggagagccacagctccaag
ctggacccgcacaaaagggaggtcctcctggctcttgccgacagccacgcggatgggcag
atcggctaccaggattttgtcagcctaatgagcaacaagcgttccaacagcttccgccaa
gccatcctgcagggcaaccgcaggctaagcagcaaggccctgctggaggagaaggggctg
agcctctcgcagcgacttatccgccatgtggcctatgagaccctgccccgggaaattgac
cgcaagtggtactatgacagctacacctgctgccccccaccctggttcatgatcacagtc
acgctgctggaggcaaggacaagggttgcctttttcctctacaatggggtgtcactaggt
caatttgtactgcaggtaactcatccacgttacttgaagaactccctggtttaccaccca
cagctgcgagcacaggtttggcgctacctgacatacatcttcatgcatgcagggatagaa
cacctgggactcaatgtggtgctgcagctgctggtgggggtgcccctggagatggtgcat
ggagccacccgaattgggcttgtctacgtggccggtgttgtggcagggtccttggcagtg
tctgtggctgacatgaccgctccagtcgtgggctcttctggaggggtgtatgctctcgtc
tctgcccatctggccaacattgtcatgcatggaacatgtcggcaagcgaagacaggcttt
ccacctaaagcgggaccgcaggtggcccacacttcactttctgtgaagaaggggttgctg
aactggtcaggcatgaagtgccagttcaagctgctgcggatggctgtggcccttatctgt
atgagcatggagtttgggcgggccgtgtggctccgcttccacccgtcggcctatcccccg
tgccctcacccaagctttgtggcgcacttgggtggcgtggccgtgggcatcaccctgggc
gtggtggtcctgaggaactacgagcagaggctccaggaccagtcactgtggtggattttt
gtggccatgtacaccgtcttcgtgctgttcgctgtcttctggaacatctttgcctacacc
ctgctggacttaaagctgccgcctcccccctga

>gi568815581f:32250286_32469756|GENSCAN_predicted_peptide_2|411_aa
MSFSTILMTVVTQPLQEVLLLKTKIKYISRDYCRSEMPLSCVVRNQNPLLNVVEMRDKET
DNVTEWEIEASPCLRTRGNQRNAGVRGPGAGRALIPTAAREQGSGLAETQGRSEAAAMLP
SLQESMDGDEKELESSEEGGSAEERRLEPPSSSHYCLYSYRGSRLAQQRGDSEDGSPSGT
NAETPSGDDFSLSLADTNLPSEVEPELRSFIAKRLSRGAVFEGLGNVASVELKIPGYRVG
CYYCLFQNEKLLPETVTIDSERNPSEYVALSYTPVEVKESDEKTKRDINRFLSVASLQGL
IHEGTMTSLCMAMTEEQHKSVVIDCSSSQPQFCNAGSNRFCEDWMQAFLNGAKGGNPFLF
RQVLENFKLKNCGSGDILLKIVKVEHEEMPEAKNVIAVLEEFMKEALDQSF

>gi568815581f:32250286_32469756|GENSCAN_predicted_CDS_2|1236_bp
atgagtttttctaccatcctcatgactgtggtaactcaacctctccaggaagttcttctg
cttaaaactaaaatcaagtatatctcaagagactactgccgatctgaaatgcctctgtca
tgtgttgtccgcaatcagaatcctcttttaaatgtagttgaaatgagagataaggaaact
gacaatgttactgaatgggagatagaggccagtccttgcctgcgaacccggggaaaccag
cggaacgcaggtgtgcgagggccgggagccggacgagccctgataccgacggctgcacgg
gagcaggggagcggtttggcggagacacagggccgctcagaggccgccgcaatgctcccc
tctttgcaggagtcgatggatggagatgaaaaggaactagagagcagcgaagagggaggc
tcagccgaggagcggagactcgagccgccgtccagcagccactactgtctttacagctat
cgcggaagcagattggcacagcaacgaggggacagtgaggacggaagcccaagtggcaca
aatgcagaaactccctctggtgatgatttcagcctctccttggcagatactaatctacca
tccgaagtggagccagagctgcgcagtttcattgctaagcgtctttcaagaggtgcagtc
tttgaagggctgggtaatgttgcatctgtggagctaaaaattccaggttaccgagttggt
tgttattactgccttttccaaaatgaaaaactgcttcctgaaacagtaacgatagactct
gaacgtaacccttcagaatatgtggctttgagttacactcctgttgaagttaaagaatca
gatgaaaaaacaaagagagacattaacaggtttctgagtgtggccagtcttcaaggactt
attcatgaaggcaccatgacttctttgtgcatggccatgacagaggagcagcataagtct
gtggtcatcgattgcagcagctcccagcctcagttctgcaatgcaggaagtaaccggttt
tgtgaggattggatgcaagcttttttaaatggtgccaaaggaggtaacccttttcttttc
cgacaagtactggagaactttaaactaaagaactgtggtagtggagatatacttttgaag
attgttaaagtggaacatgaagaaatgcctgaagccaaaaatgtgatagctgtccttgaa
gaattcatgaaagaagctcttgaccaaagtttttga

>gi568815581f:32250286_32469756|GENSCAN_predicted_peptide_3|288_aa
MKGRKTKSSALEVNDVFQGVHKETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLL
EQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP
PGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQAQAAVQ
GPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTT
SATIVDEVESKWMPTALTEDNFWDLIIQAGIVIVIIKEAVRLQLTMGN

>gi568815581f:32250286_32469756|GENSCAN_predicted_CDS_3|867_bp
atgaaaggtaggaaaaccaagagtagtgccctggaagtcaatgacgtgtttcaaggagta
cataaagaaacaatagatgccgtaccaaatgcaatacctggaagaacagacatagagttg
gaaatatatggtatggaaggtattccagaaaaagacatggatgaaagacgacgacttctt
gaacagaaaacacaagaaagtcaaaaaaagaagcaacaagatgattctgatgaatatgat
gatgacgactctgcagcctcaacttcatttcagccacagcctgttcaacctcagcaaggt
tatattcctccaatggcacagccaggactgccaccagtaccaggagcaccaggaatgcct
ccaggtatgcccccacctgttccacgtcctggaattcctccaatgactcaagcacaggct
gtttcagcgccaggtattcttaatagaccacctgcaccaacagcaactgtacctgcccca
cagcctccagttactaagcctcttttccccagtgctggacaggctcaggcagctgtccaa
ggacctgttggtacagatttcaaacccttaaatagtacccctgcaacaactacagaaccc
ccaaagcctacattccctgcttatacacagtctacagcttcaacaactagtacaacaaat
agtactgcagctaaaccagcggcttcaataacaagtaagcctgctacacttacaacaact
agtgcaaccatagtagatgaagttgagtcaaagtggatgccaactgccctcacagaagac
aacttttgggacttgataattcaggcaggcattgtgattgtcataattaaggaagctgta
agactgcagctgaccatgggtaactga

>gi568815581f:32250286_32469756|GENSCAN_predicted_peptide_4|230_aa
MRESLELPRDLLNGCDQNADSDMDNDVQAKVVSDADEELTGNWSEVKRDIQENDEEAVQV
KEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQ
EVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKAL
LVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSX

>gi568815581f:32250286_32469756|GENSCAN_predicted_CDS_4|690_bp
atgagggaaagtttggaacttcctagagacttactgaatggttgtgaccaaaatgctgat
agtgatatggacaatgatgtccaggccaaggtggtctcagatgcagatgaggaacttact
ggaaactggagtgaagtgaagcgtgacattcaggaaaacgatgaagaggcagtgcaagtc
aaagagcagagcatcctggaactgggatctctcctggcaaagactggacaagctgcagag
cttggaggactcctgaagtatgtacgacccttcttgaattccatcagcaaggctaaagca
gctcgcctggtccgatctcttcttgatctgtttcttgatatggaagcagctacagggcag
gaggtcgagctgtgtttagagtgcatcgaatgggccaagtcagagaaaagaactttctta
cgccaagctttggaggcaagactggtgtctttgtactttgataccaagaggtaccaggaa
gcattgcatttgggttctcagctgctgcgggagttgaaaaagatggacgacaaagctctt
ttggtggaagtacagcttttagaaagcaaaacataccatgccctgagcaacctgccgaaa
gcccgagctgccttaacttctgctcgaaccacagcaaatgccatctactgcccccctaaa
ttgcaggccaccttggacatgcagtcggnn