Result of FASTA (omim) for pF1KB5164
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5164, 427 aa
  1>>>pF1KB5164 427 - 427 aa - 427 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.1428+/-0.000329; mu= 4.6904+/- 0.020
 mean_var=169.0757+/-33.971, 0's: 0 Z-trim(120.7): 49  B-trim: 0 in 0/58
 Lambda= 0.098636
 statistics sampled from 36186 (36235) to 36186 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.425), width:  16
 Scan time:  9.110

The best scores are:                                      opt bits E(85289)
NP_001562 (OMIM: 603734,616532) interferon regulat ( 427) 3028 442.7 8.2e-124
XP_016882256 (OMIM: 603734,616532) PREDICTED: inte ( 427) 3028 442.7 8.2e-124
XP_016882255 (OMIM: 603734,616532) PREDICTED: inte ( 427) 3028 442.7 8.2e-124
NP_001184052 (OMIM: 603734,616532) interferon regu ( 392) 2634 386.7 5.8e-107
XP_006723261 (OMIM: 603734,616532) PREDICTED: inte ( 452) 2343 345.3 1.9e-94
XP_006723260 (OMIM: 603734,616532) PREDICTED: inte ( 452) 2343 345.3 1.9e-94
NP_001184051 (OMIM: 603734,616532) interferon regu ( 452) 2343 345.3 1.9e-94
NP_001184054 (OMIM: 603734,616532) interferon regu ( 281) 2002 296.6 5.2e-80
NP_001184055 (OMIM: 603734,616532) interferon regu ( 281) 2002 296.6 5.2e-80
XP_006723263 (OMIM: 603734,616532) PREDICTED: inte ( 417) 1949 289.2 1.3e-77
NP_001184053 (OMIM: 603734,616532) interferon regu ( 300) 1422 214.1 3.8e-55
XP_006723264 (OMIM: 603734,616532) PREDICTED: inte ( 306) 1317 199.2 1.2e-50
XP_006723265 (OMIM: 603734,616532) PREDICTED: inte ( 306) 1317 199.2 1.2e-50
NP_001184057 (OMIM: 603734,616532) interferon regu ( 154)  688 109.5 6.2e-24
NP_001184056 (OMIM: 603734,616532) interferon regu ( 154)  688 109.5 6.2e-24
NP_002154 (OMIM: 601565,614893,614894) interferon  ( 426)  476 79.6 1.7e-14
XP_011514466 (OMIM: 607218,612245,612251) PREDICTE ( 488)  399 68.7 3.8e-11
XP_011514465 (OMIM: 607218,612245,612251) PREDICTE ( 488)  399 68.7 3.8e-11
XP_011514464 (OMIM: 607218,612245,612251) PREDICTE ( 488)  399 68.7 3.8e-11
NP_001092097 (OMIM: 607218,612245,612251) interfer ( 498)  393 67.8 6.9e-11
NP_001092100 (OMIM: 607218,612245,612251) interfer ( 498)  393 67.8 6.9e-11
NP_116032 (OMIM: 607218,612245,612251) interferon  ( 498)  393 67.8 6.9e-11
XP_011514463 (OMIM: 607218,612245,612251) PREDICTE ( 504)  388 67.1 1.1e-10
XP_011514461 (OMIM: 607218,612245,612251) PREDICTE ( 514)  383 66.4 1.9e-10
XP_011514462 (OMIM: 607218,612245,612251) PREDICTE ( 514)  383 66.4 1.9e-10
XP_006716037 (OMIM: 607218,612245,612251) PREDICTE ( 514)  383 66.4 1.9e-10
XP_005250374 (OMIM: 607218,612245,612251) PREDICTE ( 514)  383 66.4 1.9e-10
XP_011514460 (OMIM: 607218,612245,612251) PREDICTE ( 514)  383 66.4 1.9e-10
NP_001092099 (OMIM: 607218,612245,612251) interfer ( 514)  383 66.4 1.9e-10
NP_006138 (OMIM: 119300,119500,607199,608864) inte ( 467)  373 65.0 4.7e-10
XP_006715153 (OMIM: 601900,611724) PREDICTED: inte ( 415)  372 64.8 4.8e-10
NP_001229381 (OMIM: 607218,612245,612251) interfer ( 412)  352 61.9 3.4e-09
NP_001182215 (OMIM: 601900,611724) interferon regu ( 450)  352 62.0 3.6e-09
NP_002451 (OMIM: 601900,611724) interferon regulat ( 451)  347 61.3   6e-09
NP_006075 (OMIM: 147574) interferon regulatory fac ( 393)  339 60.1 1.2e-08
XP_016873163 (OMIM: 605047,616345) PREDICTED: inte ( 210)  306 55.2 1.8e-07
NP_001193625 (OMIM: 119300,119500,607199,608864) i ( 372)  291 53.2 1.3e-06
NP_002190 (OMIM: 147576) interferon regulatory fac ( 349)  277 51.2 4.9e-06
XP_011541680 (OMIM: 147575,211980,613659) PREDICTE ( 284)  263 49.2 1.6e-05
NP_002189 (OMIM: 147575,211980,613659) interferon  ( 325)  263 49.2 1.8e-05
XP_016878688 (OMIM: 601565,614893,614894) PREDICTE ( 222)  216 42.4  0.0014
NP_004020 (OMIM: 605047,616345) interferon regulat ( 474)  211 41.9  0.0042
XP_005252966 (OMIM: 605047,616345) PREDICTED: inte ( 487)  211 41.9  0.0043
XP_011518368 (OMIM: 605047,616345) PREDICTED: inte ( 502)  211 41.9  0.0044
NP_001563 (OMIM: 605047,616345) interferon regulat ( 503)  211 41.9  0.0044
XP_005252964 (OMIM: 605047,616345) PREDICTED: inte ( 515)  211 41.9  0.0045
NP_004022 (OMIM: 605047,616345) interferon regulat ( 516)  211 41.9  0.0045
XP_005252963 (OMIM: 605047,616345) PREDICTED: inte ( 516)  211 41.9  0.0045


>>NP_001562 (OMIM: 603734,616532) interferon regulatory   (427 aa)
 initn: 3028 init1: 3028 opt: 3028  Z-score: 2343.8  bits: 442.7 E(85289): 8.2e-124
Smith-Waterman score: 3028; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427)

               10        20        30        40        50        60
pF1KB5 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 RLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMD
              370       380       390       400       410       420

              
pF1KB5 FQGPGES
       :::::::
NP_001 FQGPGES
              

>>XP_016882256 (OMIM: 603734,616532) PREDICTED: interfer  (427 aa)
 initn: 3028 init1: 3028 opt: 3028  Z-score: 2343.8  bits: 442.7 E(85289): 8.2e-124
Smith-Waterman score: 3028; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427)

               10        20        30        40        50        60
pF1KB5 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 RLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMD
              370       380       390       400       410       420

              
pF1KB5 FQGPGES
       :::::::
XP_016 FQGPGES
              

>>XP_016882255 (OMIM: 603734,616532) PREDICTED: interfer  (427 aa)
 initn: 3028 init1: 3028 opt: 3028  Z-score: 2343.8  bits: 442.7 E(85289): 8.2e-124
Smith-Waterman score: 3028; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427)

               10        20        30        40        50        60
pF1KB5 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 RLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMD
              370       380       390       400       410       420

              
pF1KB5 FQGPGES
       :::::::
XP_016 FQGPGES
              

>>NP_001184052 (OMIM: 603734,616532) interferon regulato  (392 aa)
 initn: 2634 init1: 2634 opt: 2634  Z-score: 2041.4  bits: 386.7 E(85289): 5.8e-107
Smith-Waterman score: 2634; 100.0% identity (100.0% similar) in 372 aa overlap (56-427:21-392)

          30        40        50        60        70        80     
pF1KB5 WVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEATGAYVPGRDKPDLPTWKRNFRSALN
                                     ::::::::::::::::::::::::::::::
NP_001           MVGRKQGWSCRVTGIKPGKPAWAEATGAYVPGRDKPDLPTWKRNFRSALN
                         10        20        30        40        50

          90       100       110       120       130       140     
pF1KB5 RKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQPDTSPDTNGGGSTSDTQEDILDELLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQPDTSPDTNGGGSTSDTQEDILDELLG
               60        70        80        90       100       110

         150       160       170       180       190       200     
pF1KB5 NMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFE
              120       130       140       150       160       170

         210       220       230       240       250       260     
pF1KB5 VTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVL
              180       190       200       210       220       230

         270       280       290       300       310       320     
pF1KB5 SCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPF
              240       250       260       270       280       290

         330       340       350       360       370       380     
pF1KB5 IVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGAS
              300       310       320       330       340       350

         390       400       410       420       
pF1KB5 SLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMDFQGPGES
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 SLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMDFQGPGES
              360       370       380       390  

>>XP_006723261 (OMIM: 603734,616532) PREDICTED: interfer  (452 aa)
 initn: 2343 init1: 2343 opt: 2343  Z-score: 1816.7  bits: 345.3 E(85289): 1.9e-94
Smith-Waterman score: 2343; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327)

               10        20        30        40        50        60
pF1KB5 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
       :::::::::::::::::::::::::::                                 
XP_006 PNSGHGPDGEVPKDKEGGVFDLGPFIVGSWAPRSDYLHGRKRTLTTLCPLVLCGGVMAPG
              310       320       330       340       350       360

>>XP_006723260 (OMIM: 603734,616532) PREDICTED: interfer  (452 aa)
 initn: 2343 init1: 2343 opt: 2343  Z-score: 1816.7  bits: 345.3 E(85289): 1.9e-94
Smith-Waterman score: 2343; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327)

               10        20        30        40        50        60
pF1KB5 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
       :::::::::::::::::::::::::::                                 
XP_006 PNSGHGPDGEVPKDKEGGVFDLGPFIVGSWAPRSDYLHGRKRTLTTLCPLVLCGGVMAPG
              310       320       330       340       350       360

>>NP_001184051 (OMIM: 603734,616532) interferon regulato  (452 aa)
 initn: 2343 init1: 2343 opt: 2343  Z-score: 1816.7  bits: 345.3 E(85289): 1.9e-94
Smith-Waterman score: 2343; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327)

               10        20        30        40        50        60
pF1KB5 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTK
       :::::::::::::::::::::::::::                                 
NP_001 PNSGHGPDGEVPKDKEGGVFDLGPFIVGSWAPRSDYLHGRKRTLTTLCPLVLCGGVMAPG
              310       320       330       340       350       360

>>NP_001184054 (OMIM: 603734,616532) interferon regulato  (281 aa)
 initn: 2002 init1: 2002 opt: 2002  Z-score: 1557.4  bits: 296.6 E(85289): 5.2e-80
Smith-Waterman score: 2002; 100.0% identity (100.0% similar) in 281 aa overlap (147-427:1-281)

        120       130       140       150       160       170      
pF1KB5 FSQPDTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSL
                                     ::::::::::::::::::::::::::::::
NP_001                               MVLAPLPDPGPPSLAVAPEPCPQPLRSPSL
                                             10        20        30

        180       190       200       210       220       230      
pF1KB5 DNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDR
               40        50        60        70        80        90

        240       250       260       270       280       290      
pF1KB5 TLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVS
              100       110       120       130       140       150

        300       310       320       330       340       350      
pF1KB5 EELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQ
              160       170       180       190       200       210

        360       370       380       390       400       410      
pF1KB5 PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLV
              220       230       240       250       260       270

        420       
pF1KB5 EGMDFQGPGES
       :::::::::::
NP_001 EGMDFQGPGES
              280 

>>NP_001184055 (OMIM: 603734,616532) interferon regulato  (281 aa)
 initn: 2002 init1: 2002 opt: 2002  Z-score: 1557.4  bits: 296.6 E(85289): 5.2e-80
Smith-Waterman score: 2002; 100.0% identity (100.0% similar) in 281 aa overlap (147-427:1-281)

        120       130       140       150       160       170      
pF1KB5 FSQPDTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSL
                                     ::::::::::::::::::::::::::::::
NP_001                               MVLAPLPDPGPPSLAVAPEPCPQPLRSPSL
                                             10        20        30

        180       190       200       210       220       230      
pF1KB5 DNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDR
               40        50        60        70        80        90

        240       250       260       270       280       290      
pF1KB5 TLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVS
              100       110       120       130       140       150

        300       310       320       330       340       350      
pF1KB5 EELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQ
              160       170       180       190       200       210

        360       370       380       390       400       410      
pF1KB5 PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLV
              220       230       240       250       260       270

        420       
pF1KB5 EGMDFQGPGES
       :::::::::::
NP_001 EGMDFQGPGES
              280 

>>XP_006723263 (OMIM: 603734,616532) PREDICTED: interfer  (417 aa)
 initn: 1949 init1: 1949 opt: 1949  Z-score: 1514.2  bits: 289.2 E(85289): 1.3e-77
Smith-Waterman score: 1949; 100.0% identity (100.0% similar) in 272 aa overlap (56-327:21-292)

          30        40        50        60        70        80     
pF1KB5 WVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEATGAYVPGRDKPDLPTWKRNFRSALN
                                     ::::::::::::::::::::::::::::::
XP_006           MVGRKQGWSCRVTGIKPGKPAWAEATGAYVPGRDKPDLPTWKRNFRSALN
                         10        20        30        40        50

          90       100       110       120       130       140     
pF1KB5 RKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQPDTSPDTNGGGSTSDTQEDILDELLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RKEGLRLAEDRSKDPHDPHKIYEFVNSGVGDFSQPDTSPDTNGGGSTSDTQEDILDELLG
               60        70        80        90       100       110

         150       160       170       180       190       200     
pF1KB5 NMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NMVLAPLPDPGPPSLAVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFE
              120       130       140       150       160       170

         210       220       230       240       250       260     
pF1KB5 VTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVL
              180       190       200       210       220       230

         270       280       290       300       310       320     
pF1KB5 SCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPF
              240       250       260       270       280       290

         330       340       350       360       370       380     
pF1KB5 IVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGAS
       ::                                                          
XP_006 IVGSWAPRSDYLHGRKRTLTTLCPLVLCGGVMAPGPAVDQEARDGQGCAHVPQGLGRNGP
              300       310       320       330       340       350




427 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 16:14:56 2016 done: Thu Nov  3 16:14:57 2016
 Total Scan time:  9.110 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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