Result of FASTA (omim) for pF1KB5122
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5122, 514 aa
  1>>>pF1KB5122 514 - 514 aa - 514 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.9793+/-0.000535; mu= 10.4559+/- 0.033
 mean_var=209.0046+/-46.772, 0's: 0 Z-trim(112.5): 374  B-trim: 0 in 0/53
 Lambda= 0.088715
 statistics sampled from 20921 (21425) to 20921 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.251), width:  16
 Scan time:  8.370

The best scores are:                                      opt bits E(85289)
NP_001308123 (OMIM: 270710,602342,608628,616944) F ( 514) 3472 458.3 2.5e-128
XP_011511444 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_005247832 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_011511443 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_016862674 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
NP_078941 (OMIM: 270710,602342,608628,616944) F-bo ( 514) 3472 458.3 2.5e-128
XP_011511445 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
XP_006713809 (OMIM: 270710,602342,608628,616944) P ( 514) 3472 458.3 2.5e-128
NP_001308122 (OMIM: 270710,602342,608628,616944) F ( 514) 3472 458.3 2.5e-128
NP_001308124 (OMIM: 270710,602342,608628,616944) F ( 427) 2928 388.6  2e-107
NP_001132940 (OMIM: 300196) F-box-like/WD repeat-c ( 526) 2486 332.1 2.4e-90
NP_001132939 (OMIM: 300196) F-box-like/WD repeat-c ( 526) 2486 332.1 2.4e-90
XP_011543873 (OMIM: 300196) PREDICTED: F-box-like/ ( 526) 2486 332.1 2.4e-90
NP_001132938 (OMIM: 300196) F-box-like/WD repeat-c ( 577) 2486 332.2 2.6e-90
NP_005638 (OMIM: 300196) F-box-like/WD repeat-cont ( 577) 2486 332.2 2.6e-90
NP_150600 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 2464 329.3 1.7e-89
NP_599021 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 2464 329.3 1.7e-89
NP_599020 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 2464 329.3 1.7e-89
XP_005262629 (OMIM: 400033) PREDICTED: F-box-like/ ( 536) 2464 329.3 1.7e-89
XP_016885576 (OMIM: 400033) PREDICTED: F-box-like/ ( 540) 2423 324.1 6.6e-88
XP_016885575 (OMIM: 400033) PREDICTED: F-box-like/ ( 577) 2423 324.1 6.9e-88
NP_004795 (OMIM: 604333) probable cytosolic iron-s ( 339)  398 64.6 5.2e-10
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357)  364 60.3 1.1e-08
NP_001246 (OMIM: 603618) cell division cycle prote ( 499)  328 55.9 3.3e-07
NP_004757 (OMIM: 606990) coatomer subunit beta' [H ( 906)  292 51.6 1.2e-05
NP_115737 (OMIM: 606929) THO complex subunit 3 [Ho ( 351)  279 49.4   2e-05
XP_016863001 (OMIM: 606990) PREDICTED: coatomer su ( 877)  284 50.6 2.3e-05
XP_016865474 (OMIM: 606929) PREDICTED: THO complex ( 263)  275 48.8 2.4e-05
NP_055317 (OMIM: 608330) pre-mRNA-processing facto ( 504)  264 47.7 9.7e-05
NP_065851 (OMIM: 611177,611263) intraflagellar tra ( 777)  266 48.2 0.00011
NP_057347 (OMIM: 603619) fizzy-related protein hom ( 493)  262 47.4 0.00011
XP_005259630 (OMIM: 603619) PREDICTED: fizzy-relat ( 496)  262 47.4 0.00011
NP_001129670 (OMIM: 603619) fizzy-related protein  ( 496)  262 47.4 0.00011
NP_003571 (OMIM: 603043) protein FAN isoform 1 [Ho ( 917)  266 48.3 0.00012
XP_016882352 (OMIM: 603619) PREDICTED: fizzy-relat ( 528)  262 47.5 0.00012
NP_001138244 (OMIM: 603043) protein FAN isoform 2  ( 948)  266 48.3 0.00012
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360)  255 46.4 0.00017
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301)  250 45.6 0.00024
NP_001129669 (OMIM: 603619) fizzy-related protein  ( 404)  252 46.0 0.00024
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353)  250 45.7 0.00027
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353)  250 45.7 0.00027
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395)  250 45.8 0.00029
NP_001151 (OMIM: 602233) apoptotic protease-activa (1194)  253 46.8 0.00044
NP_863658 (OMIM: 602233) apoptotic protease-activa (1205)  253 46.8 0.00044
NP_037361 (OMIM: 602233) apoptotic protease-activa (1237)  253 46.8 0.00045
NP_863651 (OMIM: 602233) apoptotic protease-activa (1248)  253 46.8 0.00045
NP_003380 (OMIM: 602159) coronin-2A [Homo sapiens] ( 525)  245 45.3 0.00053
NP_438171 (OMIM: 602159) coronin-2A [Homo sapiens] ( 525)  245 45.3 0.00053
XP_011517288 (OMIM: 602159) PREDICTED: coronin-2A  ( 525)  245 45.3 0.00053
NP_620640 (OMIM: 601787) transcription initiation  ( 745)  246 45.6 0.00061


>>NP_001308123 (OMIM: 270710,602342,608628,616944) F-box  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
NP_001 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>XP_011511444 (OMIM: 270710,602342,608628,616944) PREDI  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
XP_011 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>XP_005247832 (OMIM: 270710,602342,608628,616944) PREDI  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
XP_005 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>XP_011511443 (OMIM: 270710,602342,608628,616944) PREDI  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
XP_011 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>XP_016862674 (OMIM: 270710,602342,608628,616944) PREDI  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
XP_016 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>NP_078941 (OMIM: 270710,602342,608628,616944) F-box-li  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
NP_078 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>XP_011511445 (OMIM: 270710,602342,608628,616944) PREDI  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
XP_011 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>XP_006713809 (OMIM: 270710,602342,608628,616944) PREDI  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
XP_006 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>NP_001308122 (OMIM: 270710,602342,608628,616944) F-box  (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2425.0  bits: 458.3 E(85289): 2.5e-128
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
NP_001 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>NP_001308124 (OMIM: 270710,602342,608628,616944) F-box  (427 aa)
 initn: 2928 init1: 2928 opt: 2928  Z-score: 2049.6  bits: 388.6 E(85289): 2e-107
Smith-Waterman score: 2928; 100.0% identity (100.0% similar) in 427 aa overlap (88-514:1-427)

        60        70        80        90       100       110       
pF1KB5 QYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAA
                                     ::::::::::::::::::::::::::::::
NP_001                               MPDVVQTRQQAYRDKLAQQQAAAAAAAAAA
                                             10        20        30

       120       130       140       150       160       170       
pF1KB5 ASQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAW
               40        50        60        70        80        90

       180       190       200       210       220       230       
pF1KB5 NPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG
              100       110       120       130       140       150

       240       250       260       270       280       290       
pF1KB5 TLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHT
              160       170       180       190       200       210

       300       310       320       330       340       350       
pF1KB5 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKW
              220       230       240       250       260       270

       360       370       380       390       400       410       
pF1KB5 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLAS
              280       290       300       310       320       330

       420       430       440       450       460       470       
pF1KB5 ASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV
              340       350       360       370       380       390

       480       490       500       510    
pF1KB5 HSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       :::::::::::::::::::::::::::::::::::::
NP_001 HSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              400       410       420       




514 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 16:08:14 2016 done: Thu Nov  3 16:08:15 2016
 Total Scan time:  8.370 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
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