GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:26:01

Sequence gi568815593r:65491772_65724274 : 232503 bp : 37.79% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  37474  37570   97  2  1   56   94    67 0.020   2.25
 1.02 Term +  53750  53954  205  2  1   28   32   184 0.202   2.66
 1.03 PlyA +  54097  54102    6                               1.05

 2.03 PlyA -  54260  54255    6                              -0.45
 2.02 Term -  58161  57640  522  0  0   67   39   238 0.950  10.09
 2.01 Init -  63136  63026  111  1  0   26  100   161 0.996  11.36
 2.00 Prom -  68851  68812   40                              -7.35

 3.00 Prom +  69346  69385   40                              -8.05
 3.01 Init +  71540  71735  196  1  1  100   65   306 0.992  28.64
 3.02 Intr +  75742  75833   92  2  2   86   56    57 0.607   1.09
 3.03 Intr +  78079  78227  149  0  2   63   92   102 0.635   6.21
 3.04 Intr +  80068  80515  448  1  1   56   94   316 0.977  21.42
 3.05 Intr +  85108  85298  191  0  2   54  119   190 0.975  16.16
 3.06 Intr +  87653  87842  190  2  1   62   80   140 0.644   9.27
 3.07 Intr +  91267  91448  182  0  2   27   27   265 0.261  12.04
 3.08 Intr +  93243  93324   82  0  1   68  115   -17 0.205  -2.28
 3.09 Intr +  94228  94410  183  0  0   39  127   109 0.200   8.96
 3.10 Term +  95482  95625  144  0  0   55   38   146 0.978   3.23
 3.11 PlyA +  95653  95658    6                               1.05

 4.11 PlyA -  95756  95751    6                               1.05
 4.10 Term - 100177  99998  180  1  0   70   34   201 0.999   9.53
 4.09 Intr - 102874 102750  125  2  2   62   95    54 0.677   2.88
 4.08 Intr - 105409 105280  130  1  1   17  111   131 0.621   7.65
 4.07 Intr - 113274 113140  135  0  0   61   90   152 0.961  12.54
 4.06 Intr - 117687 117472  216  0  0   88   96   198 0.967  18.38
 4.05 Intr - 119272 119090  183  1  0   30   22   215 0.996   8.16
 4.04 Intr - 120110 119832  279  2  0   60   86   126 0.913   6.35
 4.03 Intr - 122448 122327  122  1  2   72   57   121 0.993   6.69
 4.02 Intr - 126484 126322  163  1  1   35   63   154 0.966   6.23
 4.01 Init - 130263 130261    3  0  0  108   81     0 0.552   1.35
 4.00 Prom - 130732 130693   40                              -8.15

 5.02 PlyA - 130881 130876    6                              -0.45
 5.01 Sngl - 132503 132171  333  2  0   88   43   240 0.904  15.49
 5.00 Prom - 134656 134617   40                              -7.15

 6.00 Prom + 135942 135981   40                              -6.65
 6.01 Init + 137817 138168  352  2  1   61   32   168 0.543   5.87
 6.02 Intr + 143530 143598   69  2  0   89   60    52 0.508   0.74
 6.03 Intr + 144173 144272  100  0  1   63   86   101 0.986   5.65
 6.04 Intr + 145925 146009   85  2  1   98  106    33 0.997   5.00
 6.05 Intr + 155284 155411  128  0  2   69   75   131 0.856   8.46
 6.06 Intr + 168928 169126  199  1  1   74  101    95 0.813   7.83
 6.07 Term + 170279 170383  105  1  0   79   38    85 0.539   0.03
 6.08 PlyA + 171741 171746    6                               1.05

 7.10 PlyA - 172359 172354    6                               1.05
 7.09 Term - 178586 178475  112  1  1   87   34   166 0.960   8.15
 7.08 Intr - 180227 180144   84  1  0   79   94    59 0.481   3.62
 7.07 Intr - 180510 180473   38  0  2   71   87    27 0.477  -2.96
 7.06 Intr - 189023 188885  139  1  1  107   95   122 0.943  14.35
 7.05 Intr - 193701 193597  105  2  0  113   98    92 0.997  11.11
 7.04 Intr - 212607 212508  100  1  1   53   97    41 0.678  -0.25
 7.03 Intr - 213025 212916  110  0  2   58  100    89 0.222   6.11
 7.02 Intr - 227408 227321   88  0  1   46   64    46 0.127  -3.89
 7.01 Init - 229036 228937  100  1  1   34   91   136 0.497   8.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:65491772_65724274|GENSCAN_predicted_peptide_1|100_aa
XLFLNDSQIYTVVQDTSIQTSVVKKPSRKHLKRNEREIKKFSDKEKLRQFVTSRPTLKER
LKEVLETETIKGILEDQEGRTIERTKTWTKATINPTVTRK

>gi568815593r:65491772_65724274|GENSCAN_predicted_CDS_1|303_bp
nttttatttctgaacgatagtcaaatttacacagtggtccaggatacttccattcagaca
tcagtagtgaaaaagcctagcagaaagcatttgaaaaggaatgaaagagaaatcaagaaa
ttctcagataaagaaaaactacgacaatttgtcaccagcagaccaactctaaaagaacgg
ctcaaggaagttcttgaaacagaaacaataaaaggaattttagaagatcaggaaggaaga
acaatagaaagaacaaaaacatggactaaagctaccataaatcctacagtcacaaggaaa
taa

>gi568815593r:65491772_65724274|GENSCAN_predicted_peptide_2|210_aa
MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEESPKVQEKFLKEIKDVALVNTQIM
RKQNSLIAVIEKVLLVYLDDQTSHHSLSQSVIHNKALALFNSTKAERDEEAAEEKCEASR
GWFMRFKERSHLHNIKMQGEAASTEAEASTSYPEDLAKILEGGYDKQQIFNVDRTALYWK
KMPSRTLIVREKLMPGSKASKGQVDSLDKD

>gi568815593r:65491772_65724274|GENSCAN_predicted_CDS_2|633_bp
atgaatcaggaggatctagatccggatagtactacagatgtgggagatgttacaaatact
gaagaagaacttattagagaatgtgaagaaatgtggaaagatatggaagaatctcccaaa
gtgcaggaaaaatttttaaaggaaattaaagatgttgctctagtgaacacacaaattatg
agaaaacagaatagccttattgctgttatagagaaagttttactagtctacttagatgat
caaaccagccatcattccctaagccaaagcgtaatccacaacaaagccctagctcttttc
aattctacaaaggctgagagagatgaggaagctgcagaagaaaagtgtgaagctagcaga
ggttggttcatgaggtttaaggaaagaagccatctccataacataaaaatgcaaggggaa
gcagcaagtactgaggcagaagcgtcaacaagttatccagaagatctagctaagatactt
gaaggtggctatgataaacagcaaattttcaatgtagacagaacagccctctattggaag
aagatgccatctaggactcttatagttagagagaagttgatgcctggctccaaagcttca
aaaggacaggttgactctcttgataaggactag

>gi568815593r:65491772_65724274|GENSCAN_predicted_peptide_3|618_aa
MAAESGSDFQQRRRRRRDPEEPEKTELSERELAVAVAVSQENDEENEERWVGPLPVEATL
AKKRKVLEFERVYLDNLPSASMYERSYMHRDVITHVNVLISFIEIGVIESIAVSSEGALF
CSVGDDKAMKVFDVVNFDMINMLKLGYFPGQCEWIYCPGDAISSVAASEKSTGKIFIYDG
RGDNQPLHIFDKLHTSPLTQIRLNPVYKAVVSSDKSGMIEYWTGPPHEYKFPKNVNWEYK
TDTDLYEFAKCKAYPTSVCFSPDGKKIATIGSDRKVRIFRFVTGKLMRVFDESLSMFTEL
QQMRQQLPDMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLGIKVINVETNRC
VRILGKQENIRVMQLALFQGIAKKHRAATTIEMKASENPVLQNIQADPTIVCTSFKKNRF
YMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLF
PVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHS
TLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVN
PKTDKPYEDVSIINITVK

>gi568815593r:65491772_65724274|GENSCAN_predicted_CDS_3|1857_bp
atggcggcggaaagtggtagcgattttcagcagagacgtagaaggcgccgggacccggag
gaaccggaaaaaacagaactcagcgaaagagagctggcagtagcagtggcggtgtcccag
gagaacgatgaggagaacgaagagcgctgggttggacctttacctgtggaggcaacactg
gccaagaagaggaaagtcttagagtttgaaagagtctatcttgataatctccccagtgca
tccatgtatgagcgcagttacatgcatagagatgttatcacccatgtgaatgttttaatt
tcatttattgaaataggagttattgagagtattgcagttagctctgagggagcattgttc
tgttctgtgggtgatgataaagcaatgaaggtgtttgatgtagtgaactttgacatgatc
aacatgctgaaacttggctattttcctggacagtgtgagtggatctattgcccaggggat
gcaatttcttcagttgctgcttccgaaaagagtacaggaaaaattttcatttatgatggc
cgaggagataaccagccacttcatatttttgacaaactccatacatcacctcttactcag
atacggctaaacccagtttacaaagcagtagtgtcttctgacaaatctgggatgattgaa
tactggactgggcctcctcatgaatataaattccccaaaaatgtgaactgggaatataaa
actgacactgatttatatgaatttgccaagtgtaaggcttatccaaccagcgtatgtttt
tcaccagatgggaagaaaatagctactattggttctgatagaaaagttagaattttcaga
tttgtaactggaaaactcatgagagtctttgatgaatcactaagcatgtttactgaactg
caacagatgaggcaacagttaccagacatggaatttggccgacgaatggctgtagaacgt
gagttggagaaggttgatgctgtaagattaattaatatagtttttgatgaaactggacac
ttcgtgctgtatggaacaatgctgggcattaaagttataaatgtagagacaaaccggtgt
gtgcggattttaggcaaacaagaaaatattagagtgatgcaattggctttgttccagggg
atagccaaaaagcatcgtgctgcaactactatagaaatgaaagcttctgaaaatcctgtt
cttcagaatattcaagctgacccaacaatagtctgtacatcattcaaaaagaatagattt
tatatgtttaccaaacgagaaccagaagatacgaaaagtgcagattctgatcgagatgtt
tttaatgagaaaccttctaaagaagaagtcatggcagctactcaagctgaaggacctaaa
cgagtttcggacagtgccattatccacaccagcatgggagacattcacaccaaacttttt
cctgttgagtgccctaagacagtggaaaacttctgtgttcacagcagaaatggttattat
aatgggcatacatttcaccgtataattaagggctttatgattcagactggagatccaaca
ggtactggtatgggaggagaaagcatatggggaggagaatttgaagatgaatttcattca
acattacgacatgacaggccatacacactcagcatggctaacgcgggatcaaatactaat
ggatcccagtttttcataacggtagtaccaacgccttggcttgataataagcatacagta
tttggacgagtgactaaaggaatggaagttgtacagaggatctccaacgtcaaagtcaat
cccaaaacagataagccctatgaggatgtcagcatcataaatattactgtcaagtaa

>gi568815593r:65491772_65724274|GENSCAN_predicted_peptide_4|511_aa
MVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGV
WGLKKNFALLELLERLQNGPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCATHL
CSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQHQVHAIEFVCLEEGCQTSPLMCCVCK
EYGKHQGHKHSVLEPEANQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVE
DGIGMAHTEHVPGTAENARSCIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQE
DMTILLSEVSAACLHCEKTLQQDDCRVVLAKQEITRLLETLQKQQQQFTEVADHIQLDAS
IPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIAVVFVVDSSH
RDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYI
QGCDARSGMGLYEGLDWLSRQLVAAGVLDVA

>gi568815593r:65491772_65724274|GENSCAN_predicted_CDS_4|1536_bp
atggtgctagagtgtggagtttgtgaagatgtcttttctttgcaaggagacaaagttccc
cgtcttttgctttgtggccataccgtctgtcatgactgtctcactcgcctacctcttcat
ggaagagcaatccgttgcccatttgatcgacaagtaacagacctaggtgattcaggtgtc
tggggattgaaaaaaaattttgctttattggagcttttggaacgactgcagaatgggcct
attggtcagtatggagctgcagaagaatccattgggatatctggagagagcatcattcgt
tgtgatgaagatgaagctcaccttgcctctgtatattgcactgtgtgtgcaactcatttg
tgctctgagtgttctcaagttactcattctacaaagacattagcaaagcacaggcgagtt
cctctagctgataaacctcatgagaaaactatgtgctctcagcaccaggtgcatgccatt
gagtttgtttgcttggaagaaggttgtcaaactagcccactcatgtgctgtgtctgcaaa
gaatatggaaaacaccagggtcacaagcattcagtattggaaccagaagctaatcagatc
cgagcatcaattttagatatggctcactgcatacggaccttcacagaggaaatctcagat
tattccagaaaattagttggaattgtgcagcacattgaaggaggagaacaaatcgtggaa
gatggaattggaatggctcacacagaacatgtaccagggactgcagagaatgcccggtca
tgtattcgagcttatttttatgatctacatgaaactctgtgtcgtcaagaagaaatggct
ctaagtgttgttgatgctcatgttcgtgaaaaattgatttggctcaggcagcaacaagaa
gatatgactattttgttgtcagaggtttctgcagcctgcctccactgtgaaaagactttg
cagcaggatgattgtagagttgtcttggcaaaacaggaaattacaaggttactggaaaca
ttgcagaaacagcagcagcagtttacagaagttgcagatcacattcagttggatgccagc
atccctgtcacttttacaaaggataatcgagttcacattggaccaaaaatggaaattcgg
gtcgttacgttaggattggatggtgctggaaaaactactatcttgtttaagttaaaacag
gatgaattcatgcagcccattccaacaattgctgttgtgtttgttgtagatagcagtcat
agagacagaattagtgaagcacacagcgaacttgcaaagttgttaacggaaaaagaactc
cgagatgctctgctcctgatttttgctaacaaacaggatgttgctggagcactgtcagta
gaagaaatcactgaactactcagtctccataaattatgctgtggccgtagctggtatatt
cagggctgtgatgctcgaagtggtatgggactgtatgaagggttggactggctctcacgg
caacttgtagctgctggagtattggatgttgcttga

>gi568815593r:65491772_65724274|GENSCAN_predicted_peptide_5|110_aa
MATLVVNKLGAGVDSGRQGSRGTAVVKVRDLACSILHHRPPFGSSWRPGGIAAAQASIGG
MRGLWAPFGITSLVLSSASFLSYGLKLPGLLLMTCHHRDICEKELAGQWQ

>gi568815593r:65491772_65724274|GENSCAN_predicted_CDS_5|333_bp
atggctaccctggttgtaaacaagctcggagcgggagtagacagtggccggcagggcagc
cgggggacagctgtagtgaaggtgagggaccttgcgtgctctattctccaccatcggcct
cccttcggttcatcctggagacctggcggcatcgccgcggcccaggcttcgataggtggg
atgcgcggcctctgggccccttttggcattacaagtctcgtcctgtcctctgcatccttt
ctctcctatggcctgaaattgcctggtcttctgctcatgacatgtcatcatcgggacatt
tgtgaaaaggagcttgcgggccagtggcagtga

>gi568815593r:65491772_65724274|GENSCAN_predicted_peptide_6|345_aa
MTTEVILHYRPCESDPTQLPKIAEKAIQDFPTRPLSRFIPWFPYDGSKLPLRPKRSPPVI
SEEAAEDVKQYLTISEHDAKSHSYDCTVDLLEFQPSLKKQHLTWSHTLKEQTNSGNLVMR
LTKPTLFTNIPVTCEEKDLPGDLFNQLMRDDPSTVNGAEVLMLGEMLTLPQNFGNIFLGE
TFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASNAAVAELKPDCCIDDVIHHEVKE
IGTHIVSTFGSRAYLQPMDTRQYLYCLKPKNEFAEKAGIIKGVTVIGKLDIVWKTNLGER
GRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCR

>gi568815593r:65491772_65724274|GENSCAN_predicted_CDS_6|1038_bp
atgactacagaagtaatattacattatcgaccatgtgagagtgatcccacacaactgcca
aaaattgcagaaaaagcaattcaagactttcctactcgtccgctatcaagatttatacct
tggtttccatatgatgggtccaagcttccactcagacctaaaagatcaccacctgtgatt
tctgaagaggcagctgaagatgtgaaacagtacttaaccatttcagaacatgatgctaag
tcacacagttatgattgcacagtagatctattggagtttcaacctagcttgaaaaagcag
catttaacctggtcacacacactgaaggaacagactaattctggaaatctggtgatgcgg
ctgactaagcctactttattcaccaatatcccagtaacatgtgaagagaaagacttacct
ggagatctctttaaccagctgatgagagatgatccttcaaccgttaatggtgcagaagtt
ttaatgttgggagaaatgctgactttaccacagaattttgggaatatatttttgggagag
accttttccagttatatcagcgttcataatgatagcaatcaagttgtaaaagacatatta
gtaaaagctgatcttcagacaagttctcagcgtttaaatctttcagcctccaatgctgca
gtggctgaacttaaaccggattgttgtattgatgatgtcatacatcatgaagtcaaagaa
attggaacacacattgtgtctacgtttgggtcaagagcatatttgcaaccaatggataca
cgccagtacttatactgcctaaagccaaagaatgaatttgcagaaaaagcaggcatcatt
aagggagtaacagtaattggaaaattggatatagtatggaaaacaaatctaggtgaaagg
ggaaggttacagaccagccaacttcaaagaatggctccaggttatggagatgttaggttg
tctttggaggcaataccagataccgtaaaccttgaagaaccttttcatattacctgtaaa
ataacaaactgcaggtaa

>gi568815593r:65491772_65724274|GENSCAN_predicted_peptide_7|291_aa
MSSIKHLVYAVIRFLREQSQMDTYTSDEQESLEGGGDENWAFALNLLAVWLVDVFPGGSE
RSRERVEDQVQIEMVIREGVASGTGWGSSKREERDEDKEGNNHMKEENYAAAVDCYTQAI
ELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEA
VTSYQKALDLDPENDSYKSNLKIAEQKLREVSSPAASLMQNPQVQQLMSGMMTNAIGGPA
AGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSAEEHS

>gi568815593r:65491772_65724274|GENSCAN_predicted_CDS_7|876_bp
atgtcatctatcaagcacctggtttatgcagttattcgtttcttacgggaacaaagtcag
atggacacttacacctcggatgaacaagaaagtttggaaggaggtggagatgaaaattgg
gcatttgctctaaacctccttgcagtctggttagttgatgtctttccaggtggcagtgag
aggagcagggaaagagtggaagaccaggtccagattgagatggtgattagggagggtgtt
gcatctggaacgggctggggcagctctaaaagggaggagagagatgaagataaggaaggc
aataaccacatgaaagaagaaaattatgctgctgcagtggattgttacacacaggcaata
gaattggatcccaataatgcagtttactattgcaacagggctgctgctcagagcaaatta
ggtcactacacagatgcgataaaggattgtgaaaaagcaatagcaattgattcaaagtac
agcaaggcctatgggagaatggggctggccctcactgccttgaataaatttgaagaagca
gttacaagttatcaaaaggcattagatcttgaccctgaaaatgattcctataagtcaaat
ctgaaaatagcagaacagaagttaagagaggtatccagtcctgcggcaagtttaatgcag
aaccctcaagttcaacagctaatgtcaggaatgatgacaaatgccattgggggacctgct
gctggagttgggggcctaactgacctgtcaagcctcatccaagcgggacagcagtttgct
cagcagatacagcaacaaaatcctgaacttatagagcaactgagaaatcacatccggagc
agatcattcagcagcagcgctgaagagcattcctga