Result of FASTA (omim) for pF1KB4394
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4394, 834 aa
  1>>>pF1KB4394 834 - 834 aa - 834 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.9167+/-0.000348; mu= 6.7750+/- 0.022
 mean_var=226.7597+/-47.063, 0's: 0 Z-trim(122.2): 39  B-trim: 1953 in 1/57
 Lambda= 0.085171
 statistics sampled from 39839 (39894) to 39839 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.468), width:  16
 Scan time: 11.510

The best scores are:                                      opt bits E(85289)
NP_150252 (OMIM: 102578) protein PML isoform 10 [H ( 585) 3897 491.9 3.6e-138
NP_150253 (OMIM: 102578) protein PML isoform 11 [H ( 781) 3587 453.9 1.3e-126
NP_150249 (OMIM: 102578) protein PML isoform 7 [Ho ( 423) 2896 368.7  3e-101
NP_150250 (OMIM: 102578) protein PML isoform 8 [Ho ( 435) 2896 368.8  3e-101
NP_150247 (OMIM: 102578) protein PML isoform 5 [Ho ( 560) 2896 368.8 3.7e-101
NP_150243 (OMIM: 102578) protein PML isoform 2 [Ho ( 611) 2896 368.9 3.9e-101
NP_002666 (OMIM: 102578) protein PML isoform 6 [Ho ( 633) 2896 368.9  4e-101
NP_150242 (OMIM: 102578) protein PML isoform 9 [Ho ( 829) 2896 369.0  5e-101
NP_150241 (OMIM: 102578) protein PML isoform 1 [Ho ( 882) 2896 369.0 5.2e-101


>>NP_150252 (OMIM: 102578) protein PML isoform 10 [Homo   (585 aa)
 initn: 3931 init1: 3897 opt: 3897  Z-score: 2601.6  bits: 491.9 E(85289): 3.6e-138
Smith-Waterman score: 3897; 99.8% identity (100.0% similar) in 573 aa overlap (1-573:1-573)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 GPSTLRVLDENLADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSI
       ::::::::::::::::::::::::::::::::.                           
NP_150 GPSTLRVLDENLADPQAEDRPLVFFDLKIDNESGFSWGYPHPFLI               
              550       560       570       580                    

              610       620       630       640       650       660
pF1KB4 YSKAVSLEVGLQHFLSFLSSMRRPILACYKLWGPGLPNFFRALEDINRLWEFQEAISGFL

>>NP_150253 (OMIM: 102578) protein PML isoform 11 [Homo   (781 aa)
 initn: 3587 init1: 3587 opt: 3587  Z-score: 2394.0  bits: 453.9 E(85289): 1.3e-126
Smith-Waterman score: 3587; 97.9% identity (98.9% similar) in 535 aa overlap (1-535:1-535)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLE
       ::::::::::::::::::::::::::::::::::::::::::  . .. .  .::     
NP_150 RSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSCMEPMETAEPQSSPAHSS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 GPSTLRVLDENLADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSI
                                                                   
NP_150 PAHSSPAHSSPVQSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEPHSEPPDHQER
              550       560       570       580       590       600

>>NP_150249 (OMIM: 102578) protein PML isoform 7 [Homo s  (423 aa)
 initn: 2896 init1: 2896 opt: 2896  Z-score: 1938.8  bits: 368.7 E(85289): 3e-101
Smith-Waterman score: 2896; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLRN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
                                                                   
NP_150 ALW                                                         
                                                                   

>>NP_150250 (OMIM: 102578) protein PML isoform 8 [Homo s  (435 aa)
 initn: 2896 init1: 2896 opt: 2896  Z-score: 1938.6  bits: 368.8 E(85289): 3e-101
Smith-Waterman score: 2896; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLLP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSP
                                                                   
NP_150 PPAHALTGPAQSSTH                                             
              430                                                  

>>NP_150247 (OMIM: 102578) protein PML isoform 5 [Homo s  (560 aa)
 initn: 3458 init1: 2896 opt: 2896  Z-score: 1937.1  bits: 368.8 E(85289): 3.7e-101
Smith-Waterman score: 3367; 91.0% identity (91.2% similar) in 556 aa overlap (1-507:1-556)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410          
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
              370       380       390       400       410       420

                                                    420       430  
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
                                                     ::::::::::::::
NP_150 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
              430       440       450       460       470       480

            440       450       460       470       480       490  
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
              490       500       510       520       530       540

            500        510       520       530       540       550 
pF1KB4 NSNHVASGAGEA-EERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDEN
       :::::::::::: .::                                            
NP_150 NSNHVASGAGEAGRERNALW                                        
              550       560                                        

>>NP_150243 (OMIM: 102578) protein PML isoform 2 [Homo s  (611 aa)
 initn: 3565 init1: 2896 opt: 2896  Z-score: 1936.6  bits: 368.9 E(85289): 3.9e-101
Smith-Waterman score: 3479; 88.4% identity (89.9% similar) in 596 aa overlap (1-547:1-596)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410          
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
              370       380       390       400       410       420

                                                    420       430  
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
                                                     ::::::::::::::
NP_150 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
              430       440       450       460       470       480

            440       450       460       470       480       490  
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
              490       500       510       520       530       540

            500       510       520        530       540       550 
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENS-SSRELDDSSSESSDLQLEGPSTLRVLDEN
       :::::::::::::::::::::::::::::: :. :..  .  :  .. .: .  .:    
NP_150 NSNHVASGAGEAEERVVVISSSEDSDAENSVSGPEVQPRTPASPHFRSQGAQPQQVTLRL
              550       560       570       580       590       600

             560       570       580       590       600       610 
pF1KB4 LADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGL
                                                                   
NP_150 ALRLGNFPVRH                                                 
              610                                                  

>>NP_002666 (OMIM: 102578) protein PML isoform 6 [Homo s  (633 aa)
 initn: 3883 init1: 2896 opt: 2896  Z-score: 1936.4  bits: 368.9 E(85289): 4e-101
Smith-Waterman score: 3791; 92.1% identity (92.3% similar) in 621 aa overlap (1-573:1-621)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410          
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_002 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
              370       380       390       400       410       420

                                                    420       430  
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
                                                     ::::::::::::::
NP_002 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
              430       440       450       460       470       480

            440       450       460       470       480       490  
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
              490       500       510       520       530       540

            500       510       520       530       540       550  
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
              550       560       570       580       590       600

            560       570       580       590       600       610  
pF1KB4 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
       ::::::::::::::::::::.                                       
NP_002 ADPQAEDRPLVFFDLKIDNESGFSWGYPHPFLI                           
              610       620       630                              

>>NP_150242 (OMIM: 102578) protein PML isoform 9 [Homo s  (829 aa)
 initn: 3573 init1: 2896 opt: 2896  Z-score: 1934.8  bits: 369.0 E(85289): 5e-101
Smith-Waterman score: 3481; 89.9% identity (90.7% similar) in 583 aa overlap (1-535:1-583)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410          
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
              370       380       390       400       410       420

                                                    420       430  
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
                                                     ::::::::::::::
NP_150 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
              430       440       450       460       470       480

            440       450       460       470       480       490  
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
              490       500       510       520       530       540

            500       510       520       530       540       550  
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
       ::::::::::::::::::::::::::::::  . .. .  .::                 
NP_150 NSNHVASGAGEAEERVVVISSSEDSDAENSCMEPMETAEPQSSPAHSSPAHSSPAHSSPV
              550       560       570       580       590       600

            560       570       580       590       600       610  
pF1KB4 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
                                                                   
NP_150 QSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEPHSEPPDHQERPAVHRGIRYLLY
              610       620       630       640       650       660

>>NP_150241 (OMIM: 102578) protein PML isoform 1 [Homo s  (882 aa)
 initn: 5575 init1: 2896 opt: 2896  Z-score: 1934.4  bits: 369.0 E(85289): 5.2e-101
Smith-Waterman score: 5383; 94.5% identity (94.5% similar) in 866 aa overlap (1-818:1-866)

               10        20        30        40        50        60
pF1KB4 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MEPAPARSPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLGADTPALDNVFFESLQRRLSVYR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QIVDAQAVCTRCKESADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRNQSVREFLDG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 TRKTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQRQEEL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DAMTQALQEQDSAFGAVHAQMHAAVGQLGRARAETEELIRERVRQVVAHVRAQERELLEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 VDARYQRDYEEMASRLGRLDAVLQRIRTGSALVQRMKCYASDQEVLDMHGFLRQALCRLR
              310       320       330       340       350       360

              370       380       390       400       410          
pF1KB4 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDL--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_150 QEEPQSLQAAVRTDGFDEFKVRLQDLSSCITQGKDAAVSKKASPEAASTPRDPIDVDLPE
              370       380       390       400       410       420

                                                    420       430  
pF1KB4 ----------------------------------------------DVSNTTTAQKRKCS
                                                     ::::::::::::::
NP_150 EAERVKAQVQALGLAEAQPMAVVQSVPGAHPVPVYAFSIKGPSYGEDVSNTTTAQKRKCS
              430       440       450       460       470       480

            440       450       460       470       480       490  
pF1KB4 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 QTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLP
              490       500       510       520       530       540

            500       510       520       530       540       550  
pF1KB4 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 NSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSTLRVLDENL
              550       560       570       580       590       600

            560       570       580       590       600       610  
pF1KB4 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 ADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVVIQPEAFFSIYSKAVSLEVGLQ
              610       620       630       640       650       660

            620       630       640       650       660       670  
pF1KB4 HFLSFLSSMRRPILACYKLWGPGLPNFFRALEDINRLWEFQEAISGFLAALPLIRERVPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 HFLSFLSSMRRPILACYKLWGPGLPNFFRALEDINRLWEFQEAISGFLAALPLIRERVPG
              670       680       690       700       710       720

            680       690       700       710       720       730  
pF1KB4 ASSFKLKNLAQTYLARNMSERSAMAAVLAMRDLCRLLEVSPGPQLAQHVYPFSSLQCFAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 ASSFKLKNLAQTYLARNMSERSAMAAVLAMRDLCRLLEVSPGPQLAQHVYPFSSLQCFAS
              730       740       750       760       770       780

            740       750       760       770       780       790  
pF1KB4 LQPLVQAAVLPRAEARLLALHNVSFMELLSAHRRDRQGGLKKYSRYLSLQTTTLPPAQPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 LQPLVQAAVLPRAEARLLALHNVSFMELLSAHRRDRQGGLKKYSRYLSLQTTTLPPAQPA
              790       800       810       820       830       840

            800       810       820       830    
pF1KB4 FNLQALGTYFEGLLEGPALARAEGVSTPLAGRGLAERASQQS
       ::::::::::::::::::::::::::                
NP_150 FNLQALGTYFEGLLEGPALARAEGVSTPLAGRGLAERASQQS
              850       860       870       880  




834 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 14:56:39 2016 done: Thu Nov  3 14:56:41 2016
 Total Scan time: 11.510 Total Display time:  0.110

Function used was FASTA [36.3.4 Apr, 2011]
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