GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:42:18

Sequence gi568815592r:96698475_96899731 : 201257 bp : 38.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6490   6564   75  0  0   84  108   100 0.798  12.74
 1.02 Intr +  29664  29766  103  2  1   92   95    38 0.221   3.73
 1.03 Term +  33946  34196  251  2  2   79   42   128 0.664   2.18
 1.04 PlyA +  34499  34504    6                               1.05

 2.00 Prom +  40146  40185   40                              -4.65
 2.01 Init +  47156  47228   73  1  1   62   52   107 0.362   5.78
 2.02 Intr +  52632  52732  101  1  2   48   97    93 0.331   5.11
 2.03 Term +  53645  53911  267  1  0  131   43    81 0.956   2.41
 2.04 PlyA +  54177  54182    6                               1.05

 3.05 PlyA -  54978  54973    6                               1.05
 3.04 Term -  63842  63401  442  1  1   91   39   282 0.729  17.34
 3.03 Intr -  66461  66397   65  2  2  101    6    73 0.179  -3.00
 3.02 Intr -  70136  69957  180  2  0   25   35   166 0.211   4.14
 3.01 Init -  72279  72274    6  0  0   71   84    17 0.370  -0.47
 3.00 Prom -  72327  72288   40                              -6.05

 4.00 Prom +  74112  74151   40                              -3.65
 4.01 Init +  76271  76357   87  1  0   60   89    66 0.172   4.60
 4.02 Intr +  86649  86857  209  2  2   91   72    91 0.525   4.75
 4.03 Intr +  87004  87095   92  1  2   71   37    41 0.290  -3.98
 4.04 Term +  89747  89928  182  0  2   14   41   204 0.402   5.09
 4.05 PlyA +  90090  90095    6                               1.05

 5.02 PlyA -  90754  90749    6                               1.05
 5.01 Sngl - 101257  99998 1260  1  0   91   42   580 0.985  49.31
 5.00 Prom - 120848 120809   40                              -4.55

 6.00 Prom + 133130 133169   40                              -3.25
 6.01 Init + 134443 134536   94  0  1   64   -7   112 0.620  -0.11
 6.02 Intr + 138903 139114  212  1  2   92  105   198 0.770  19.61
 6.03 Intr + 144591 144796  206  2  2   85   52    59 0.003  -0.92
 6.04 Intr + 161196 161418  223  0  1   49   85   144 0.027   7.41
 6.05 Intr + 161765 162112  348  1  0   42   45   192 0.037   4.93
 6.06 Intr + 165084 165171   88  2  1   43   87    26 0.026  -3.38
 6.07 Term + 178824 179041  218  1  2   68   39   152 0.768   4.62
 6.08 PlyA + 179934 179939    6                               1.05

 7.04 PlyA - 180213 180208    6                               1.05
 7.03 Term - 192917 192630  288  2  0   96   49   197 0.999  10.99
 7.02 Intr - 198373 198270  104  2  2   93   99   165 0.984  17.07
 7.01 Init - 199327 198886  442  1  1   66    4   331 0.923  18.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:96698475_96899731|GENSCAN_predicted_peptide_1|142_aa
MHSNTPSSNGSGIHVIESEQALKAQAFPECLICGKPCPDARDTGMNRLGSYLYRAFNSNA
HPLPLRDNSLGILSCFLCIILKCTRSSEVVIKPNDLALLPLSLLLSHSHIVMDMIVLNAD
ISEIQEGFLELHLCNPESSKFI

>gi568815592r:96698475_96899731|GENSCAN_predicted_CDS_1|429_bp
atgcacagcaacaccccatcatcaaatggaagtggtatacatgtcatcgagtctgagcag
gccctaaaagcacaagcatttcctgagtgcttaatatgtggcaagccctgccctgatgct
agggatacaggaatgaacagactcggttcctatctttatagagcttttaatagcaatgca
catcccctgcctcttagagataattcccttggaattctcagttgcttcctctgcatcatt
ctgaagtgtactagatccagtgaagttgtcatcaagcccaacgacttagctctcctccct
ctgtctttgttactcagccattcccacatcgtgatggacatgatagtgttaaatgcagat
atctctgagattcaggaaggctttcttgaactgcacctttgcaaccctgaatcctccaaa
tttatctga

>gi568815592r:96698475_96899731|GENSCAN_predicted_peptide_2|146_aa
MSVLGSPLELKKYKSCGKYKAMDFESLPKKEIPCKKKNHQSSGEGRQKAEAQKKEEKKVT
TPPISHKRLNKPCSLGVTISTYFLIAAVPYRPPYYSLSFDKDFGIWLMVFLFSPSPAITM
RDSSAHLNPWSLRFQSPYVWLFSRNF

>gi568815592r:96698475_96899731|GENSCAN_predicted_CDS_2|441_bp
atgagcgtcctgggctccccactggaattgaagaaatacaagagctgtgggaaatataaa
gccatggacttcgagagcttgcctaagaaggagatcccatgcaaaaagaagaatcatcaa
tcatcaggagagggaaggcagaaggctgaagctcagaagaaggaagagaagaaggtgaca
actcctccaatttctcataaaagactaaacaaaccctgctctctgggggtcactatttct
acttacttcttaattgctgctgtcccctacagacctccttattactctctttcttttgac
aaagactttggcatctggctcatggtcttcctcttcagcccaagccctgccatcaccatg
agggactccagtgcccatcttaacccctggtctctgagatttcagtctccttatgtctgg
ttattttctaggaacttttga

>gi568815592r:96698475_96899731|GENSCAN_predicted_peptide_3|230_aa
MLSKLPSLPDTSREKWLIGATVMAATPLPGNSVALDSVQPAAAGCSPSRLHSSVLETQGP
GGGPVDLQRGGSNVNLVERIVERVTRTWELPNGEAKRAITQTVLQHAPCSPRCGRKEGEK
SCSPLGSPDLGAPGARAVTPSLGPCSSWHLQAFRCHRIPQCQLGKLLVVHLVQPQPFREP
APMPGPGADCPAAAAGISDGAAARPHTPSSTPCRSMPDSKTSLEAWDPGW

>gi568815592r:96698475_96899731|GENSCAN_predicted_CDS_3|693_bp
atgctgtccaaactgcccagtcttcctgataccagcagagaaaaatggctgattggagcc
acagtgatggcggccacccctctgcctgggaactcagtagccttagacagtgtccagcct
gctgctgctggctgcagcccaagcaggttgcacagctctgtgcttgagacccaaggccct
ggtgggggtcctgtggatttacagagaggaggatcaaatgtaaatctagtggagagaatt
gtggaaagggtgacaagaacttgggaactgccaaatggtgaggctaaaagagctatcaca
caaacagtgctgcaacatgccccttgctcaccacgttgtgggcgaaaagaaggagagaag
agctgcagccctttggggagcccagacctgggagctcctggagccagggctgtgactccc
tctttggggccctgcagttcctggcatctccaagctttcaggtgccaccgcattccccag
tgccagctggggaagctgcttgtggtgcacctggtccagccacagcctttcagagagccg
gcacccatgccgggacctggagctgactgccctgcggcagcagccggcatatctgacggc
gcagcggccagacctcacactccctcatccaccccttgccgctccatgcctgactcaaag
acttccttggaggcatgggatccaggctggtag

>gi568815592r:96698475_96899731|GENSCAN_predicted_peptide_4|189_aa
MSFAGTWMELEAIILSKLMEEQKTKHFSLPGYQDCQSFCLIHKFHSLGYRAHQCHKEVED
LDCVRGNLFGMGLKMEAGAVHGLTLMGYYQTVRETHSLRKVQPHNQLLSTEIFVKVMEAI
FKFGHKNLPVTCGDRFEIDLPFLAATLEAFFPGDTRLSDGFFRSEQQGTPGVLVTVPPLY
ESRSLLKSN

>gi568815592r:96698475_96899731|GENSCAN_predicted_CDS_4|570_bp
atgtcctttgcagggacatggatggagctggaagccatcattctcagcaaactaatggag
gaacagaaaaccaaacacttctcacttccaggatatcaagactgtcagtcattctgcctc
atccataaatttcacagcctgggatacagagctcatcaatgccataaggaagttgaggac
ttagactgtgtcagaggaaatctttttggcatgggtctgaagatggaagctggagctgta
cacgggctaactctcatgggctactatcaaacagtgagggaaacccacagtctcaggaag
gtgcaaccacataaccaacttctatccacagaaatatttgtgaaagtgatggaggccata
ttcaagtttggccataaaaatcttccagtcacttgcggagacagatttgagattgatctc
ccattcttggctgcaacactagaagccttcttccctggtgatactcgtctcagtgatggc
tttttccgtagtgagcagcagggaacccctggtgttttggtaacagtacctccactttat
gagtcccgtagcctcttaaaatccaattaa

>gi568815592r:96698475_96899731|GENSCAN_predicted_peptide_5|419_aa
MVFSAVLTAFHTGTSNTTFVVYENTYMNITLPPPFQHPDLSPLLRYSFETMAPTGLSSLT
VNSTAVPTTPAAFKSLNLPLQITLSAIMIFILFVSFLGNLVVCLMVYQKAAMRSAINILL
ASLAFADMLLAVLNMPFALVTILTTRWIFGKFFCRVSAMFFWLFVIEGVAILLIISIDRF
LIIVQRQDKLNPYRAKVLIAVSWATSFCVAFPLAVGNPDLQIPSRAPQCVFGYTTNPGYQ
AYVILISLISFFIPFLVILYSFMGILNTLRHNALRIHSYPEGICLSQASKLGLMSLQRPF
QMSIDMGFKTRAFTTILILFAVFIVCWAPFTTYSLVATFSKHFYYQHNFFEISTWLLWLC
YLKSALNPLIYYWRIKKFHDACLDMMPKSFKFLPQLPGHTKRRIRPSAVYVCGEHRTVV

>gi568815592r:96698475_96899731|GENSCAN_predicted_CDS_5|1260_bp
atggtcttctcggcagtgttgactgcgttccataccgggacatccaacacaacatttgtc
gtgtatgaaaacacctacatgaatattacactccctccaccattccagcatcctgacctc
agtccattgcttagatatagttttgaaaccatggctcccactggtttgagttccttgacc
gtgaatagtacagctgtgcccacaacaccagcagcatttaagagcctaaacttgcctctt
cagatcaccctttctgctataatgatattcattctgtttgtgtcttttcttgggaacttg
gttgtttgcctcatggtttaccaaaaagctgccatgaggtctgcaattaacatcctcctt
gccagcctagcttttgcagacatgttgcttgcagtgctgaacatgccctttgccctggta
actattcttactacccgatggatttttgggaaattcttctgtagggtatctgctatgttt
ttctggttatttgtgatagaaggagtagccatcctgctcatcattagcatagataggttc
cttattatagtccagaggcaggataagctaaacccatatagagctaaggttctgattgca
gtttcttgggcaacttccttttgtgtagcttttcctttagccgtaggaaaccccgacctg
cagataccttcccgagctccccagtgtgtgtttgggtacacaaccaatccaggctaccag
gcttatgtgattttgatttctctcatttctttcttcatacccttcctggtaatactgtac
tcatttatgggcatactcaacacccttcggcacaatgccttgaggatccatagctaccct
gaaggtatatgcctcagccaggccagcaaactgggtctcatgagtctgcagagacctttc
cagatgagcattgacatgggctttaaaacacgtgccttcaccactattttgattctcttt
gctgtcttcattgtctgctgggccccattcaccacttacagccttgtggcaacattcagt
aagcacttttactatcagcacaacttttttgagattagcacctggctactgtggctctgc
tacctcaagtctgcattgaatccgctgatctactactggaggattaagaaattccatgat
gcttgcctggacatgatgcctaagtccttcaagtttttgccgcagctccctggtcacaca
aagcgacggatacgtcctagtgctgtctatgtgtgtggggaacatcggacggtggtgtga

>gi568815592r:96698475_96899731|GENSCAN_predicted_peptide_6|462_aa
MEKPDIQLILETPIIQEMNNAKEGKTSEEVLKNNAARRRRKEDNEEEVVAAAAIQAAVAG
AGAESEEHRGRAPPPREPPRGSRPQGNQRSLLKAPAPVLDREGGWCPVTSSGCQLPLCAA
VAYSPSISGLPSFSGGWCPVTSSGCLHLGMSMVKSVVKSIGTKWLMLLFFLDLWNFELER
DDLGYLVEEISKQQSIQEVTWVLLKAFSFKRETDHKSLENLQPDNAIEKKIPFSEEKFKP
AAEICMMYGNAWMPWQKFAAGVVPSWRTSARSVKKGNVGLEPPHRITTGALPSGAVRRGP
LSSIPQSGRSTVSFHHVPGKSADTQCQSMKAARREAVPCKATGVELPKTMGTHLLPQCDL
NDLSKMPQNSSVLLMGSTPSIQGSNQWANRESTEAPEKLATQKMCGTVPAPRSNAECFCI
QVLQKLHALQNPCLLTEFSSFSFPLSCGSPTSCAIIEHTEAP

>gi568815592r:96698475_96899731|GENSCAN_predicted_CDS_6|1389_bp
atggagaaacctgatattcaacttatactcgaaactcctatcattcaagaaatgaataat
gcaaaagaaggaaaaacatctgaagaagtgctgaagaacaacgctgccaggcggaggagg
aaggaggacaacgaagaggaggtggtggcggcggcggcgatacaggcggcggtggcggga
gctggagctgaaagtgaggagcatcgcggacgagcgccgccgcctcgcgagccgccgagg
ggttcccgcccccagggtaaccaacgctccctcttaaaggcgccggccccggttttagac
cgggagggtggctggtgtccagtgactagctctggctgccagctgcctctctgcgctgca
gttgcttactctccaagtatctctgggctcccatctttctcgggtggctggtgtccagtg
actagctctggctgcctccatcttgggatgtccatggtgaagtctgtggttaagtccata
gggactaaatggttgatgcttctgttctttttagatttgtggaactttgaacttgagaga
gatgatttagggtatctggtggaagaaatttctaagcagcaaagcattcaagaggtgact
tgggtgctattaaaggcattcagtttcaaaagggaaacagatcataaaagtttggaaaat
ttgcagcctgacaatgcaatagaaaagaaaatcccattttctgaggagaaattcaagcca
gctgcagaaatttgcatgatgtatggaaatgcctggatgccctggcagaaatttgctgca
ggggtggtgccctcatggagaacctctgctaggtcagtgaagaagggaaatgtggggttg
gagcccccacacagaatcactactggggcactgcctagtggggctgtgagaagagggcca
ctgtcctccataccccagagtggtagatccactgtcagctttcaccatgtgcctggaaaa
tctgcagatactcaatgccagtccatgaaagcagccagaagggaggctgtaccctgcaaa
gccacaggggtggagctgcccaagaccatgggaacccaccttttgcctcagtgtgacctg
aatgatctttccaaaatgccccagaattcttctgttttactaatgggatcaactccctca
atccaaggtagcaatcaatgggccaacagagagagcacggaagctccagagaaactggca
actcagaagatgtgtggcaccgtgcccgctccaaggagtaatgctgaatgcttttgcatt
caggttttgcaaaaacttcatgcacttcagaacccatgcttactaactgaattttcaagc
ttctcttttcccctttcttgtggaagcccaacttcctgtgccatcattgagcatactgag
gctccctga

>gi568815592r:96698475_96899731|GENSCAN_predicted_peptide_7|277_aa
MGALVIRGIRNFNLENRAEREISKMKPSVAPRHPSTNSLLREQISREWCEGVSGPGGAES
LCCPAVPSVGPEAEGSASACSAAAARVGGALEGGAARPVTLRLSSAPAVRSAAPPTSETQ
RQQPVLPLTRPSPAAVTDLIQGIKIREVYPEVKGEIARKDEKLLSFLKDVYVDSKDPVSS
LQVKAAETCQEPKEFRLPKDHHFDMINIKSIPKGKISIVEALTLLNNHKLFPETWTAEKI
MQEYQLEQKDVNSLLKYFVTFEVEIFPPEDKKAIRSK

>gi568815592r:96698475_96899731|GENSCAN_predicted_CDS_7|834_bp
atgggagcactagtgattcgcggtatcaggaatttcaacctagagaaccgagcggaacgg
gaaatcagcaagatgaagccctctgtcgctcccagacacccctctaccaacagcctcctg
cgagagcagattagtcgtgagtggtgcgagggcgtttcggggcccgggggcgcggagtcc
ctgtgctgcccggctgtccctagcgtgggtccggaggccgagggatcggcgtcagcctgc
tcggccgcagccgctcgggttggcggagcgttggaagggggagccgccaggccggtgaca
ttgagactgtcctccgcgcccgcggtgaggtcggcggccccgcctacttccgagacccag
aggcagcagccagtgctcccgctaaccaggccctcgccggctgctgtcacggacttgata
cagggaatcaaaatccgagaggtctatccagaagttaaaggagagattgctcgtaaagat
gaaaagctgctgtcgtttctaaaagatgtgtatgttgattccaaagatcctgtgtcttcc
ttgcaggtaaaagctgctgaaacatgtcaagagccgaaggaattcagattgccgaaagac
catcattttgatatgataaatattaagagcattcccaaaggcaaaatttccattgtagaa
gcattgacacttctcaataatcataagcttttcccagaaacctggactgctgagaaaata
atgcaggaataccagttagaacagaaagatgtgaattctcttcttaaatattttgttact
tttgaagtcgaaatcttccctcctgaagacaagaaagcaatacgatcaaaatga