GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:30:57

Sequence gi568815591f:107374061_107575359 : 201299 bp : 37.01% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4248   4471  224  2  2   79   72   187 0.649  14.28
 1.02 Intr +   5197   5309  113  1  2  -16   98    98 0.036  -0.50
 1.03 Intr +   9479   9607  129  0  0   57   62    81 0.616   2.15
 1.04 Intr +  12352  12463  112  2  1   40   89   182 0.805  12.02
 1.05 Intr +  14060  14272  213  2  0   22   96   101 0.320   1.21
 1.06 Term +  14475  14940  466  0  1   13   28   273 0.408   7.30
 1.07 PlyA +  16833  16838    6                               1.05

 2.06 PlyA -  19033  19028    6                               1.05
 2.05 Term -  29586  29477  110  1  2   73   50    71 0.449  -0.51
 2.04 Intr -  29815  29699  117  2  0   72   82    73 0.455   4.62
 2.03 Intr -  34318  34234   85  1  1   68   -7    55 0.182  -7.53
 2.02 Intr -  38572  38442  131  2  2   63   90   111 0.740   8.29
 2.01 Init -  53614  53461  154  1  1   48   84   142 0.920   9.10
 2.00 Prom -  89062  89023   40                              -2.95

 3.00 Prom +  97559  97598   40                              -6.85
 3.01 Sngl + 100031 101302 1272  1  0   87   44   228 0.962  13.95
 3.02 PlyA + 101577 101582    6                               1.05

 4.00 Prom + 119019 119058   40                              -1.35
 4.01 Init + 121075 121240  166  0  1   65   92    67 0.601   4.69
 4.02 Intr + 131744 131940  197  0  2   98   37   156 0.672   9.71
 4.03 Intr + 134946 135151  206  2  2   64   55   195 0.318  10.88
 4.04 Intr + 135345 135592  248  0  2  -48   58   184 0.522  -2.02
 4.05 Term + 136641 137686 1046  1  2   23   48   638 0.621  44.60
 4.06 PlyA + 137692 137697    6                               1.05

 5.00 Prom + 147116 147155   40                              -3.15
 5.01 Init + 159081 159368  288  2  0   60   72   238 0.852  16.56
 5.02 Intr + 159536 159860  325  1  1  -21   77   199 0.168   2.32
 5.03 Term + 169606 170108  503  2  2   41   40   260 0.084  10.16
 5.04 PlyA + 170840 170845    6                               1.05

 6.07 PlyA - 171150 171145    6                               1.05
 6.06 Term - 173728 173720    9  1  0  100   36     0 0.207  -6.78
 6.05 Intr - 174120 174051   70  2  1  124   68    53 0.338   5.17
 6.04 Intr - 174272 174218   55  0  1   86   52    67 0.469   0.02
 6.03 Intr - 180282 180225   58  0  1   73   71    60 0.564   0.34
 6.02 Intr - 184055 183916  140  0  2   92   91   121 0.969  12.06
 6.01 Init - 189929 189743  187  2  1  101  103   281 0.986  28.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   4850   5270  421  2  1   13   49   203 0.863   2.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:107374061_107575359|GENSCAN_predicted_peptide_1|418_aa
MRKNQRKKVENYKNQNASSLPENHNSSPATKQNWMENEFDEMTEAGFRRWVITNSSELKE
HVLTQCKEAKNLEKRALEGSTKYGKEKPVPATAKTYQIVKTTDTMEKLHQLTGPPTSRVQ
AAFAVPAKVAGTWGCKDRRGKEDTLPSLPHVPQVSGSARQTPAAGAPCEERCGGSTTDRR
KEVKSTAQSVSNQNWLNKLSYNAQIASSQAISTRVNPRELEPNQLWQTDVPHNPEFGKLR
YVRISIDTNSHLISAHALPRESTRKQKRESMGKDPATLLAQALFTLKFLNLDDKFQSAVE
KHFSKTSQGIKPAVSWKDVNSNVRCGPSELLMRGRGHACVHTPLGPLCVPAWRIKPHHGV
PRTQPGTRDEGTDPTGPAALNNAASTDDTSLKCHLMLKRITQKAETNSTPDTDTIYSK

>gi568815591f:107374061_107575359|GENSCAN_predicted_CDS_1|1257_bp
atgaggaaaaaccagcgcaaaaaggttgaaaattacaaaaaccagaatgcctcttctctt
ccagaaaatcacaactcctcgccagcaacgaaacaaaactggatggagaatgagtttgat
gaaatgacagaagcaggcttcagaaggtgggtaataacaaactcctccgagctaaaggag
catgttctaacccaatgcaaggaagctaagaaccttgaaaaaagagctcttgaaggaagc
actaaatatggaaaggaaaaaccagtaccagctactgcaaaaacataccaaattgtgaag
accacggacactatggagaaactgcatcaattaacaggcccccctacctcaagggtgcaa
gctgcttttgcggtgcctgccaaggttgctggaacttgggggtgcaaggacagaagaggg
aaagaggacactcttccctctctccctcacgtaccccaggtatctgggtctgccagacag
acccccgcagctggtgccccgtgtgaggaacgctgcggaggaagcacgacggaccgccga
aaagaagtgaaaagcaccgcgcagtcagtgagtaatcaaaactggctaaacaaattatcc
tacaatgcccagattgccagctcacaggcaatctccacacgtgttaaccctagagaatta
gaacctaatcagttatggcaaacagacgttccacacaaccctgaatttggaaaacttaga
tatgtacgtatatccattgataccaattctcacttaattagtgcccatgctttgcctaga
gaatcaacccgaaaacagaaaagggagagtatgggtaaagaccctgcaacactattggca
caagccttatttacccttaagtttttaaatttagatgacaaatttcaatcagctgtagaa
aagcacttttctaaaacctctcaaggtataaaacctgcagtttcatggaaagatgtgaac
agtaatgtacggtgtggtccaagtgaattactaatgcggggaagaggacatgcttgtgtt
cacacccccttaggtcctctttgtgttccagcatggcgcatcaaaccacaccatggcgtg
cctaggacccaacctggtaccagagatgaaggaactgaccctacaggacccgcagccctg
aacaatgcggcttccacagacgacacaagcctcaaatgtcacctgatgctgaagaggata
actcagaaggctgaaacgaattctactccagacacagacaccatttactccaaataa

>gi568815591f:107374061_107575359|GENSCAN_predicted_peptide_2|198_aa
MSPVAGLGLSEASVEASPAGGGPAGKSHREKSSVNCITPGKTLLPSKVTFTDYLSQGIDL
SGIEVIENDLLFIARARLEVENQAKRLLEQGLETQLLWSTTIQLENLEISSSKDQHTFCE
ETDNKLSLHFYGCYVPNASSLNSPYVEILTAKIMLFGGRPLGEPERAAYPFAMWDHIKKV
SVVREGNITHRGLLGLGG

>gi568815591f:107374061_107575359|GENSCAN_predicted_CDS_2|597_bp
atgtctccagtggcaggcctggggctgagcgaggcttcggtggaggcgtcaccagctgga
ggaggtccagctggcaaaagtcaccgagaaaaatccagtgtcaactgtattacacctggg
aaaaccctgcttccaagtaaagtcacatttacagattatctttctcaaggaatagatctt
tctggaatagaagtgatagaaaatgatctactttttattgcaagagcccgacttgaagtg
gaaaatcaagctaagcgcctactagagcagggtttggagactcagctgctgtggagcacc
actattcaactggaaaacttggaaatcagctcatctaaggaccagcacactttttgcgaa
gagacagataataaattgtcacttcatttttatggctgctatgttcccaatgcatcctcc
ttaaattctccttatgttgaaatcctaaccgccaaaattatgttatttggaggtcggcct
ttgggagagcctgagagagctgcttatccttttgccatgtgggatcatattaaaaaggtg
tccgttgtcagggaagggaacatcacacaccggggcctgttggggttagggggctag

>gi568815591f:107374061_107575359|GENSCAN_predicted_peptide_3|423_aa
MQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKS
NLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTA
INVFAITLDRYDISVKPANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTW
ENKTLLCVSTNEYYTELGMYYHLLVQIPIFFFTVVVMLITYTKILQALNIRIGTRFSTGQ
KKKARKKKTISLTTQHEATDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKR
VFRMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLVMAYGTTIFHPLLYAFT
RQKFQKVLKSKMKKRVVSIVEADPLPNNAVIHNSWIDPKRNKKITFEDSEIREKCLVPQV
VTD

>gi568815591f:107374061_107575359|GENSCAN_predicted_CDS_3|1272_bp
atgcagtctgaatctaacattacagtgcgagatgacattgatgacatcaacaccaatatg
taccaaccactatcatatccgttaagctttcaagtgtctctcaccggatttcttatgtta
gaaattgtgttgggacttggcagcaacctcactgtattggtactttactgcatgaaatcc
aacttaatcaactctgtcagtaacattattacaatgaatcttcatgtacttgatgtaata
atttgtgtgggatgtattcctctaactatagttatccttctgctttcactggagagtaac
actgctctcatttgctgtttccatgaggcttgtgtatcttttgcaagtgtctcaacagca
atcaacgtttttgctatcactttggacagatatgacatctctgtaaaacctgcaaaccga
attctgacaatgggcagagctgtaatgttaatgatatccatttggattttttcttttttc
tctttcctgattccttttattgaggtaaattttttcagtcttcaaagtggaaatacctgg
gaaaacaagacacttttatgtgtcagtacaaatgaatactacactgaactgggaatgtat
tatcacctgttagtacagatcccaatattctttttcactgttgtagtaatgttaatcaca
tacaccaaaatacttcaggctcttaatattcgaataggcacaagattttcaacagggcag
aagaagaaagcaagaaagaaaaagacaatttctctaaccacacaacatgaggctacagac
atgtcacaaagcagtggtgggagaaatgtagtctttggtgtaagaacttcagtttctgta
ataattgccctccggcgagctgtgaaacgacaccgtgaacgacgagaaagacaaaagaga
gtcttcaggatgtctttattgattatttctacatttcttctctgctggacaccaatttct
gttttaaataccaccattttatgtttaggcccaagtgaccttttagtaaaattaagattg
tgttttttagtcatggcttatggaacaactatatttcaccctctattatatgcattcact
agacaaaaatttcaaaaggtcttgaaaagtaaaatgaaaaagcgagttgtttctatagta
gaagctgatcccctgcctaataatgctgtaatacacaactcttggatagatcctaaaaga
aacaaaaaaattacctttgaagatagtgaaataagagaaaaatgtttagtgcctcaggtt
gtcacagactag

>gi568815591f:107374061_107575359|GENSCAN_predicted_peptide_4|620_aa
MAESWGLTNLRCQRTELMAGTATERIGKKHTKEKEVRAIILVPTLPESLAIANYTETGVP
KGKNTVNAVVPLGLDAQCGCHTLGCCLECLQGIQRYGLSSSLPAVGTSTSSDGGGRKVTQ
TERSSSPAMEQSWKENDFDVLREEGFRRSNYSELKEKVRTNGKEVKNLEKKVDEWLTRIT
NAEKSLKELRPSLRLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQ
RCSSRRATPTHVIVRFTKVEMKDKMLRAAREKDHSAIKLELRIKKLTQNRSTTWKLNNLL
QNDYWVHNEMKAEIKMFSETNGNKDTTYQYLWHTFKAVCRGKFIALNAHKRKQERSKIDT
LTSQLKELEKQEQTHSKASRRQEITKIRAELKEIETQNTVQKINESRSWFFEKINKTDRL
LARLIKKKREKNQIDAIKNDKGDITTDPTEIQTTITEYYKHLYANKLDNLEEMDKFLDTY
TIPRLKQEEVESLNRPITDSEIVAIINSLPTKKSPGADGFTAKFYQTYKEELVPFLLKLF
QSIEKEGILPNSLYEASIILIPKPGRDTTKKESFRPISLMNADAKILNTILANRIQQHIK
KLIYHDQVGFIPGMQGWFNI

>gi568815591f:107374061_107575359|GENSCAN_predicted_CDS_4|1863_bp
atggcagaaagctggggccttactaacttgcggtgtcagaggactgagctcatggctggc
acggcaactgaaaggatagggaagaaacacacaaaggaaaaagaggtaagggccataatt
ttagtaccaactttgccagaatccttggcgatagctaactacacagaaacaggtgtccct
aagggcaagaatactgtgaatgctgttgttcctctgggtctagatgcccagtgtggctgc
catactctaggctgctgcttggaatgcctgcaaggaatccagagatatggcctgtcctca
agtctcccagcagtgggtaccagtaccagctctgatgggggtggcaggaaagtgacacag
actgaacgcagctcctcaccagcaatggaacaaagctggaaggagaatgactttgacgtg
ttgagagaagaaggcttcagaagatcaaactactctgagctaaaggagaaagttcgaacc
aatggcaaagaagttaaaaaccttgaaaaaaaagtagacgaatggctaactagaataacc
aatgcagagaagtccttaaaggagctgagaccaagtctacgtctgattggtgtacctgaa
agtgatggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaac
ttccccaatctagcaaggcaggccaacattcagattcaggaaatacagagaacgccacaa
agatgctcctcgagaagagcaactccaacacacgtaattgtcagattcaccaaagttgaa
atgaaggacaaaatgttaagggcagccagagagaaagaccacagtgcaatcaaactagaa
ctcaggattaagaaactcactcaaaaccgctccactacatggaaactgaacaacctgctc
cagaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctctgaaacc
aacggaaacaaagacacaacataccagtatctctggcacacattcaaagcagtgtgtaga
gggaaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacacc
ctaacgtcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcaga
aggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaataccgtt
caaaaaattaatgaatccaggagctggttttttgaaaagatcaacaaaactgatagactg
ctagcaagactaataaagaagaaaagagagaagaatcaaatagatgcaataaaaaatgat
aaaggggatatcaccaccgatcccacagaaatacaaactaccatcacagaatactacaaa
cacctctacgcaaataaactagacaatctagaagaaatggataaattcctcgacacatac
accatcccaagactaaaacaggaagaagttgaatctctgaatagaccaataacagactct
gaaattgtggcaataatcaatagcttaccaaccaaaaaaagtccaggagcagatggattc
acagccaaattctaccagacgtacaaggaggagctggtaccattccttctgaaactattc
caatcaatagaaaaagagggaatcctccctaactcactttatgaggccagcatcatcctg
ataccaaagcctggcagagacacaacaaaaaaagagagttttagaccaatatccttgatg
aacgctgatgcaaaaatcctcaatacaatactggcaaaccgaatccagcagcacatcaaa
aagcttatctaccatgatcaagtgggcttcatccctgggatgcaaggctggtttaacata
tga

>gi568815591f:107374061_107575359|GENSCAN_predicted_peptide_5|371_aa
MQKLHPKVTNSKDQKVDKSTKMRKNQHKKAENAKNQNTSSPPKDHNASPAREQKWMGNQF
DKLTEGDFRRRVITNSSKLQEHVLTQCKEAKSFEKKHEEKIREKRMKKNKQSLQEIQDYV
KRPNLHLIAVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRRPLRYSSRRTT
PRQIIIRFTKVEMKEKMLRAAQEKDQPKWPQTPGLPRIRLAPVASDTRPAHKDTGSKPAL
RVHIPSQPLWPHTPTDTKFRLLWQSQGPGPSQQNLASSGKPRVQAHHSRTQCQACPQDLM
THTCLSGPVSRQALADPASRPALTHPASRKTLMAPGTKQAPTDCSLQWTQSPGLFQQTKA
PGPPLQTQAPG

>gi568815591f:107374061_107575359|GENSCAN_predicted_CDS_5|1116_bp
atgcaaaaactccatccaaaggtcaccaacagcaaagaccaaaaggtagataaatccacg
aagatgaggaaaaaccagcacaaaaaggctgaaaatgccaaaaaccagaatacctcttct
cctccaaaggatcacaacgcctcaccagcaagggaacaaaagtggatggggaatcagttt
gacaaattgacagaaggagacttcagaaggcgggtaataacaaactcctccaagctacag
gagcatgttctaacccaatgcaaggaagctaagagctttgaaaaaaagcatgaagaaaag
atcagagaaaaaagaatgaaaaagaacaaacaaagcctccaagaaatacaggactatgtg
aaaagaccaaacctacatttgattgctgtacccgaaagcgatggggagaatggaaccaag
ttggaaaacacacttcaagatattatccaggagaacttccctaacctagcaagacaggcc
aacattcaaattcaggaaatacagagaagaccactaagatactcctcaagaagaacaacc
ccaagacagataatcatcagattcaccaaggttgaaatgaaagaaaaaatgttaagagca
gcccaagagaaagaccagcccaagtggccccaaacaccaggtctgccccgcatcaggttg
gcacctgtggcctcagacaccaggccagcacacaaggacacaggctccaagcctgcccta
cgggtccacattccaagtcagcccctgtggccccacactccaacagacacaaagttcagg
ctcctctggcagagccagggtccaggtccatcccagcagaacctggcctcctctggcaaa
cccagggtccaggctcatcacagcagaacccagtgccaggcctgcccccaagacctgatg
actcacacctgcctcagtggcccagtctccaggcaagcccttgcagacccagcctccagg
ccagcactcactcacccagcctctaggaagaccctcatggctccaggcacaaagcaagca
cccacagactgcagccttcagtggacccagagtccaggcttatttcagcagaccaaggct
ccaggaccacccttgcaaacccaagctccaggctaa

>gi568815591f:107374061_107575359|GENSCAN_predicted_peptide_6|172_aa
MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL
QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ
ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQLL

>gi568815591f:107374061_107575359|GENSCAN_predicted_CDS_6|519_bp
atgggctgggtgggcgggcggcgccgggattctgcgtcaccacctgggcggagccgttct
gctgctgacgacatcaacccggcacctgccaacatggaaggtggcggcggcagcgtcgct
gtagctggcctcggagctcgaggctctggagcggctgcagctacagtccgggaacttctg
caggacgggtgttatagtgactttttaaacgaagactttgatgtaaagacttatacttct
caatctattcatcaagctgtaattgctgaacaactagcaaaacttgcccaaggaatcagt
cagttggacagagaactacacttacaggttgttgcaagacatgaagatttactggcacaa
gcaactgggattgagtcgttggaaggtgttcttcagatgatgcagacgagaattggggct
ttacagggagctgttgataggataaaagcaaaaattgttgaaccatacaataagatagtt
gcccggactgcacaactagcaagacttcagctattgtaa