GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:17:30

Sequence gi568815593r:88622607_88923788 : 301182 bp : 37.28% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  18342  18381   40                              -3.85
 1.01 Init +  37063  37225  163  0  1   29   66   168 0.951   8.64
 1.02 Term +  38122  38183   62  2  2   20   50   124 0.355  -1.21
 1.03 PlyA +  38848  38853    6                               1.05

 2.08 PlyA -  40069  40064    6                               1.05
 2.07 Term -  45344  45121  224  0  2   80   41   157 0.629   6.30
 2.06 Intr -  49591  49304  288  2  0   48   48   122 0.398   0.49
 2.05 Intr -  52262  52064  199  2  1   86   11   193 0.637   9.40
 2.04 Intr -  53399  53247  153  2  0   34    2   234 0.688   8.75
 2.03 Intr -  53845  53574  272  2  2    8  -71   489 0.780  21.34
 2.02 Intr -  55543  55443  101  0  2   -9  102    78 0.830  -1.67
 2.01 Init -  55902  55742  161  0  2   83   86   171 0.955  13.74
 2.00 Prom -  56184  56145   40                              -4.75

 3.00 Prom +  56531  56570   40                             -11.64
 3.01 Init +  56596  56687   92  0  2    6   81   108 0.826   1.91
 3.02 Intr +  57607  57799  193  1  1   28   75   159 0.693   7.17
 3.03 Term +  57981  58232  252  2  0   59   40   223 0.985   9.25
 3.04 PlyA +  58597  58602    6                               1.05

 4.00 Prom +  58639  58678   40                              -6.95
 4.01 Init +  62325  62419   95  2  2   71   37   171 0.972  10.20
 4.02 Intr +  62867  62943   77  2  2   67   85    39 0.866  -0.26
 4.03 Intr +  65109  65227  119  1  2   26   81   173 0.820   9.66
 4.04 Intr +  66731  66881  151  1  1   -9   91   112 0.613   0.61
 4.05 Intr +  67018  67143  126  2  0   72   36   112 0.495   4.13
 4.06 Intr +  72139  72268  130  2  1   87   31   126 0.506   5.63
 4.07 Term +  72740  73016  277  2  1   65   38   275 0.887  14.15
 4.08 PlyA +  73904  73909    6                               1.05

 5.05 PlyA -  74159  74154    6                               1.05
 5.04 Term -  77208  76919  290  1  2   77   45   117 0.434   0.85
 5.03 Intr -  86024  85892  133  2  1   62   40   129 0.147   4.80
 5.02 Intr -  92630  92537   94  1  1  101   66    62 0.196   4.35
 5.01 Init -  98658  98642   17  0  2   78   89     9 0.178  -0.25
 5.00 Prom -  99334  99295   40                              -7.15

 6.13 PlyA -  99366  99361    6                               1.05
 6.12 Term - 100319  99998  322  1  1  120   43   176 0.948   9.61
 6.11 Intr - 106022 105887  136  0  1   56   86    88 0.951   4.11
 6.10 Intr - 106741 106612  130  1  1   44  117    13 0.793  -0.85
 6.09 Intr - 107628 107605   24  0  0   62  111    46 0.571   1.60
 6.08 Intr - 109295 109123  173  0  2  103   35   162 0.928  11.14
 6.07 Intr - 126511 126464   48  2  0  124  115    52 0.997   9.23
 6.06 Intr - 129437 129260  178  2  1  118   92    35 0.641   5.47
 6.05 Intr - 138519 138382  138  0  0   60   95   104 0.979   8.04
 6.04 Intr - 138762 138579  184  2  1   83   75   155 0.687  12.57
 6.03 Intr - 176493 176180  314  0  2   70   71   198 0.095  10.36
 6.02 Intr - 182195 181992  204  2  0  115   78   309 0.757  31.07
 6.01 Init - 201182 201129   54  2  0   80  109    59 0.889   8.53
 6.00 Prom - 207494 207455   40                              -7.05

 7.00 Prom + 210213 210252   40                              -6.65
 7.01 Init + 222558 222776  219  2  0   80   93   123 0.846  10.68
 7.02 Term + 228291 228341   51  2  0   75   32    81 0.347  -2.35
 7.03 PlyA + 229885 229890    6                               1.05

 8.00 Prom + 231853 231892   40                              -4.95
 8.01 Init + 234391 234556  166  0  1   87   53   111 0.202   7.39
 8.02 Term + 245153 245355  203  0  2   22   34   142 0.205  -1.23
 8.03 PlyA + 245602 245607    6                               1.05

 9.00 Prom + 250918 250957   40                              -5.65
 9.01 Init + 260607 260898  292  2  1   57   28   467 0.243  32.96
 9.02 Intr + 269502 269671  170  1  2   47   48   163 0.174   6.94
 9.03 Term + 270230 270433  204  1  0   48   48   121 0.650   0.49
 9.04 PlyA + 270470 270475    6                               1.05

10.04 PlyA - 270991 270986    6                               1.05
10.03 Term - 275428 275340   89  2  2   42   51    97 0.445  -1.76
10.02 Intr - 281396 281310   87  0  0   90  105    46 0.317   5.52
10.01 Init - 292445 292364   82  2  1   37   75    75 0.359   2.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_1|74_aa
MQIDQQQESHYLWSPTTSPELAIDLVRPLVHGIKTVLTCWPVPFGVTEAQPADGGIPKQP
QTGGGAEAVTEVAD

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_1|225_bp
atgcaaatcgaccagcagcaagaaagccactacctttggagtcccacgacttcacctgag
cttgcaatagaccttgtgcgccctttggttcatggaatcaaaactgttttgacatgttgg
ccagtgcccttcggtgtcactgaagctcagcccgcggacggcgggattcccaagcaaccg
cagaccggaggtggcgcagaggcagtgaccgaggtcgctgattag

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_2|465_aa
MGVRAGWEGAPTLRARLPGWDRAPGPAAAAAATLPTLFPNTHLASESPSHRPSGRTRTRS
LLLPSKYMHRHSMPCNVAGVFVLILHKGARARRGGGGGGEGGGGGEVEEEEEEEEEEEEE
EEEEEEEEEEERMEAPRSPDYAWAGAASSNLFFSEPGSRRSSAAHRTGAETTVLEGYSPD
VEGDRELTSMDVTSQLNLEREAGMGENTERQPAEPESAGGGGSSRAQAGLRNGPRPLLGR
RADLRAGKKGAPVAVVATSPLCPRPPSVPFHRSTSQPQLCFPDMFVAIGPHACEGRTQGD
GNSGNVFALVSAAFYLANVPAVLEWGTVLRGQESSGIDQKLDRRLCQVTATAGGPFGAVA
ALGPAPQSRVPFPPFLGVHLCLPPSFLHLGTERDFFQSLDTRTIYTSTEEVKGRGLLFQE
QSVVLAEEMLIEKIGIVAMLPLLLLSLPLLGQQAWGSWLITDAYQ

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_2|1398_bp
atgggggtgagggcggggtgggagggggctccgacactgcgcgctcggctgccgggctgg
gacagagcacccggacccgcggcggcagcggcagcgacgctacccaccctcttccccaac
acccacctagccagcgagtcaccgagccaccggccctcgggccgtacacgcacgcgttcc
ttgctactgccatctaaatatatgcaccgacactctatgccctgcaacgtggccggtgtg
tttgtcctgatcctacataaaggagcgagagcaagaagaggaggaggaggtggaggagaa
ggaggaggaggaggagaggtggaagaggaggaggaggaggaggaggaggaggaggaggag
gaggaggaggaggaggaggaggaggaggaggaaagaatggaggcgccgcggagccctgat
tatgcatgggctggagctgcctcctctaacctgttcttctccgagccgggcagccggcgg
tcctcagccgcccacagaacaggagccgaaacaaccgttctcgaaggctacagcccggac
gtagagggagacagggagctgacgtcaatggacgtgacctcgcagctaaaccttgaacgt
gaagccgggatgggggaaaacacggagcggcagccggcggagcccgagagcgcgggcggc
ggcggcagtagccgagcccaggccgggctaagaaatggtcctcggcctcttctgggccgg
agggcagatctacgagcaggcaagaaaggggcgccggtggctgtggtggcgacttctccg
ctctgccctcggccgccaagtgtgccgtttcatcgttccacctcgcagccccagctttgt
tttcctgacatgttcgtggccattgggccccacgcctgcgaggggagaacccagggtgat
gggaactcgggcaatgtatttgcattagtgtctgcggcgttttatcttgcaaatgtaccc
gcggtgcttgaatgggggactgtcttgaggggtcaggagagcagtggaattgatcagaag
ttagaccggaggctctgtcaagtcacggccacggccgggggcccctttggagctgtggct
gccttgggcccagcaccgcagagtcgggttccgtttcctccctttcttggtgtccacctc
tgtctaccaccctcctttctccaccttggcaccgagagagatttcttccagtctttggat
actagaacgatctacactagcacggaggaggtaaaaggccgcgggttgcttttccaggag
cagtcggtagtgctagcggaagagatgttgattgagaaaatagggattgttgcaatgctg
ccgctactgctgctgtcgctgccgctgctcgggcagcaggcgtggggcagttggctgatc
actgatgcatatcaataa

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_3|178_aa
MTFKDDVGYLTVKIKACLNDSAVVQPCPLKCPYGTPVESPLFGFYQEALSAPPPPMAREE
KGGRVGSHERSRLGAASVGAHVSPQQTRLSFLSPKGNSDTYWPHGYRARAVRAALGRGAG
LRGLGRPRETSPKALRTALGLVRPGEDKATLSGDPWEDCRMELNTQAHTHAHFFWGTG

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_3|537_bp
atgacatttaaagatgatgttggctacctcacggtaaaaattaaggcttgccttaacgac
tcggcagttgtccaaccatgtcctctgaaatgcccatatggaaccccggttgaatctccc
ctcttcggattttaccaggaggccctcagtgccccaccgccgcccatggcacgtgaagag
aaaggagggagagttgggagccacgagagaagccggctcggagccgcttccgtcggggcc
catgtttcgccccaacagacccgtctctcctttctctccccgaaggggaacagcgacacc
tactggccgcatgggtaccgcgcccgggccgtcagggctgccctgggacggggtgccggg
ctccgtggacttgggaggccgcgggaaacttcaccgaaggctctgcggactgctctagga
ctcgtccgccctggagaagacaaagccacgctttctggagacccctgggaggactgtagg
atggaactgaacacacaggcacacacgcatgcccattttttctggggaaccggataa

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_4|324_aa
MEDEEEVENQKVVRALLEKEEEEEEEEEGWEGLPQPEPCVSVHIGTPPHLISACFYRGTD
GCVWGLVPTQISTGSSAGRRDPANGIHEETHVRLEKKFKLTPVPALELDQVLATAPTWNA
GSVAPKPKAKGKRNEVWDGGRPLIGGSDWGGLPGMPPPTPSPAEDSSAAGLPEALTPASP
LGAIDADLGVRLGEVLGIKRHELRFLLHNFSMREEDIEYLTQSSGMEPSKTLFPSLELLC
KKDFRSETPQCGSKTRLGCPGMERGLSLDWNSWNRRGLVSLSQALRTAYSSRQGHLGREK
VERVFGKGETLENAAPPHPVSVDE

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_4|975_bp
atggaggatgaagaggaggtggagaatcagaaggtagtgcgggcgttgttagagaaggag
gaggaagaggaggaggaggaggagggatgggaggggctccctcagcccgaaccctgcgtc
tctgttcacattggaacaccccctcacctcatctcagcttgcttttaccgaggaacagac
ggctgcgtgtgggggctggtccctacccagatcagtacaggatcttcagctggcagacga
gatccagcaaatggaattcacgaagaaactcatgtgcgtttggaaaaaaagttcaagctg
acacctgtgcctgccctggagctagatcaggttctggcgactgctccaacctggaacgcc
ggctcagtagcgcccaagccgaaggcgaaggggaagaggaacgaagtgtgggatgggggg
cggcccctcattgggggttcagactggggcgggcttccagggatgccccctccgaccccg
tcaccagcggaggactcatctgccgcggggctgccggaagctctcactcccgccagcccc
ctgggtgctattgatgcggaccttggagtgcggcttggagaagtcttgggaatcaaacgg
catgaacttagattcctgttacacaacttttcaatgagggaggaggatatcgaatacctc
actcagtcttcgggaatggagccttcaaaaacacttttcccatccttggagttgctctgt
aagaaggactttcggagtgaaactccacagtgcggttcaaagacacgcttaggatgcccc
gggatggagagaggactgagcttggactggaattcctggaacagacgagggcttgtgagc
ttgtcccaggcactgaggacagcatactcttcccgacaagggcatctgggtcgagagaag
gtggagcgggtcttcggcaaaggcgaaaccctggagaacgctgccccaccccaccctgta
agcgtggacgagtaa

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_5|177_aa
MHLGIQNITFPKDNLVGSYFTNAQSTYSTYRESRAVQSNLPSKKKEALDVGWLKAHKTKC
SDIDKDKKRGTPGPKHSPDARGFPGEKVRAKMKQKEEKKEEEQEGEKDQEEDEEKGEGGK
KKKGGRKEGKGKKKRKEHTKSILPPNVKCIEGTYLVLEVSMESHQLYLTEDSFCCSM

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_5|534_bp
atgcatcttggaattcagaatatcacgttcccaaaagataatttggtaggatcctacttt
actaatgctcaaagcacctactccacttacagagaaagccgagctgtgcagtcaaacttg
cctagcaagaagaaagaggcactggatgttgggtggctgaaagctcacaagacaaaatgt
agtgatatagacaaggacaaaaagagagggacccctggacctaagcactctccagatgcc
agaggatttccaggagagaaagtaagagcaaaaatgaagcagaaggaagaaaaaaaggag
gaagagcaagagggggagaaggatcaggaagaggatgaggagaaaggagaaggaggaaag
aaaaagaagggaggaagaaaagaaggaaagggaaaaaaaaagagaaaggaacacaccaaa
agtatcctccctccaaatgttaaatgcattgaaggaacttacttagttttagaagtgtcc
atggagtctcaccaattatatcttacagaagactccttttgttgctcaatgtga

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_6|634_aa
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVEETLPSRGRQTPHTRELRLATGGCHSGTKLPEEGT
GSNLCCSPASAGVNPGKWSEVDLQQTPADLQQRCLTVKRKTNKQKGIASTSTKRMSAPKP
HPKVTSIKDQSLCLGLNFPNYVFQTLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKINE
DIDLMISRQRLCALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKSHKIPAV
PPPNFEMPVSIPVSSHNSLVYSNPVSSLGNPNLLPLAHPSLQRNSMSPGVTHRPPSAGGL
MGGDLTSGAGTSAGNGYGNPRNSPGLLVSPGNLNKNMQAKSPPPMNLGMNNRKPDLRVLI
PPGSKNTMPSVSEDVDLLLNQRINNSQSAQSLATPVVSVATPTLPGQGMGGYPSAISTTY
GTEYSLSSADLSSLSGFNTASALHLGSVTGWQQQHLHNMPPSALSQLGACTSTHLSQSSN
LSLPSTQSLNIKSEPVSPPRDRTTTPSRYPQHTRHEAGRSPVDSLSSCSSSYDGSDREDH
RNEFHSPIGLTRPSPDERESPSVKRMRLSEGWAT

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_6|1905_bp
atggggagaaaaaagattcagattacgaggattatggatgaacgtaacagacaggtgaca
tttacaaagaggaaatttgggttgatgaagaaggcttatgagctgagcgtgctgtgtgac
tgtgagattgcgctgatcatcttcaacagcaccaacaagctgttccagtatgccagcacc
gacatggacaaagtgcttctcaagtacacggagtacaacgagccgcatgagagccggaca
aactcagacatcgtggaggagacacttcccagcaggggtcgacagacacctcatacgaga
gagctccggctggcaactggtgggtgccactctgggacgaagcttccagaggaaggaaca
ggcagcaatctttgctgttctccagcctctgctggtgttaacccaggcaaatggtctgaa
gtagacctccagcaaactccagcagacctgcagcagaggtgcctgactgttaaaaggaaa
actaacaaacagaaaggaatagcatcaacatcaacaaaaaggatgtctgcaccaaaaccc
catccaaaggtcaccagcatcaaagaccaaagcctttgtctaggtttgaactttccaaat
tatgtatttcagacgttgagaaagaagggccttaatggctgtgacagcccagaccccgat
gcggacgattccgtaggtcacagccctgagtctgaggacaagtacaggaaaattaacgaa
gatattgatctaatgatcagcaggcaaagattgtgtgcattgaacaagaaagaaaacaaa
ggctgtgaaagccccgatcccgactcctcttatgcactcaccccacgcactgaagaaaaa
tacaaaaaaattaatgaagaatttgataatatgatcaagagtcataaaattcctgctgtt
ccacctcccaacttcgagatgccagtctccatcccagtgtccagccacaacagtttggtg
tacagcaaccctgtcagctcactgggaaaccccaacctattgccactggctcacccttct
ctgcagaggaatagtatgtctcctggtgtaacacatcgacctccaagtgcaggtggtctg
atgggtggagacctcacgtctggtgcaggcaccagtgcagggaacgggtatggcaatccc
cgaaactcaccaggtctgctggtctcacctggtaacttgaacaagaatatgcaagcaaaa
tctcctcccccaatgaatttaggaatgaataaccgtaaaccagatctccgagttcttatt
ccaccaggcagcaagaatacgatgccatcagtgtctgaggatgtcgacctgcttttgaat
caaaggataaataactcccagtcggctcagtcattggctaccccagtggtttccgtagca
actcctactttaccaggacaaggaatgggaggatatccatcagccatttcaacaacatat
ggtaccgagtactctctgagtagtgcagacctgtcatctctgtctgggtttaacaccgcc
agcgctcttcaccttggttcagtaactggctggcaacagcaacacctacataacatgcca
ccatctgccctcagtcagttgggagcttgcactagcactcatttatctcagagttcaaat
ctctccctgccttctactcaaagcctcaacatcaagtcagaacctgtttctcctcctaga
gaccgtaccaccaccccttcgagatacccacaacacacgcgccacgaggcggggagatct
cctgttgacagcttgagcagctgtagcagttcgtacgacgggagcgaccgagaggatcac
cggaacgaattccactcccccattggactcaccagaccttcgccggacgaaagggaaagt
ccctcagtcaagcgcatgcgactttctgaaggatgggcaacatga

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_7|89_aa
MNITNNERLTATVISSRVNGAYNCCCQQLLQIAKRPQKQFRKEKFLNGSTLWKKLFLYSH
CSFPALKYDVEATPTQCKDEDEDLNDDPL

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_7|270_bp
atgaacattacaaataacgaacgcttaactgcaactgtcatatcctcccgtgtcaatggt
gcctataattgctgttgtcaacagctgcttcaaattgccaaaagaccccagaaacaattc
aggaaggaaaagtttttaaatggatccacattatggaaaaaactcttcctttatagtcac
tgttcatttcctgcattgaaatatgacgtagaagcaactcctactcaatgtaaagatgag
gatgaagaccttaatgatgatccactttaa

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_8|122_aa
MHLEKPQTLNASLRKQPGLGGWGAIPCKATGAELSKAMGAHLLHQHDLDVRHRVKEDQSY
FQPPSQQELKTNWSTYVDADGKRIQLSLNSLKKAEWRAFWSLQSNLSLRVQRDSLMDFLV
CE

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_8|369_bp
atgcacctggaaaagccacagacactcaatgccagcctgagaaagcagccaggattgggg
ggctggggggctataccctgcaaagccacaggggcagagctgtccaaggccatgggagcc
caccttttgcatcagcatgaccttgatgtgagacatagagtcaaagaagatcagtcctac
tttcaaccaccaagccagcaagaattgaaaaccaactggtcaacatatgtcgatgcagat
ggaaaaaggatacaactgtctttaaattccctaaagaaagctgagtggagagccttctgg
tcactgcagtccaacctatcattacgcgtgcagcgagactctttgatggatttcttagtc
tgtgaataa

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_9|221_aa
MCACVRAREGSAREGGGAGPRIRARRGRSEEEEEEEEGGGREGGGGGGGESGSQRPVGLK
VTRLVQKTASRKEVTEDEWEKENSSQRLKHRVKKTGGAFFPFSLKSSILRENVSLLQVLV
DMEEGLTFSMADNREGWSDLEEAVWPTANWLYHMVRVRSDCLLMSFQVSDGRLWQLGWAK
ACWEGVAHRMPNGAFCSRGPRSSSVRHMINTTAVLGDCTIS

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_9|666_bp
atgtgtgcgtgtgtgcgcgcgcgcgaggggagcgcgcgcgagggggggggcgcggggccg
cgcattcgcgcgcgccgaggccgctcggaagaggaggaggaggaggaagaaggaggagga
agagaaggaggaggaggaggaggaggagaaagtggctctcagcggccggtcggattaaaa
gtaaccagactcgtccagaaaactgcgtccaggaaggaagtgacagaagacgaatgggaa
aaggagaacagctcacagcgtttgaaacatcgcgtaaaaaagactgggggtgcattcttc
ccattctccctaaaatccagtatccttagagaaaatgtttcacttcttcaggtgcttgta
gacatggaagaaggcctcaccttctccatggctgacaaccgagaaggctggtctgacttg
gaagaagctgtgtggccaacagccaattggctgtatcacatggtcagagtccgctcagat
tgtctcctgatgtcattccaagtgtctgatggccgtctatggcaactgggttgggcaaaa
gcctgctgggaaggggtagcccacagaatgcctaatggagcgttctgttcaagaggacct
agaagtagttctgttagacatatgatcaacactacagctgtgttaggggactgtaccatt
tcttga

>gi568815593r:88622607_88923788|GENSCAN_predicted_peptide_10|85_aa
MRKRESKAPNMLPIVAEFGPGTDRFAAGIFLPVRVWTTKPSAGADGYNFLEKQKGTESSM
QISAMEEPPEEPVIMQIPEIAAKWA

>gi568815593r:88622607_88923788|GENSCAN_predicted_CDS_10|258_bp
atgaggaaaagagagtcaaaggctccaaatatgcttcctattgttgctgagtttggtcca
gggactgataggtttgctgcaggaatttttttacctgtcagggtttggacaacaaagccc
tcagcaggtgctgacgggtacaacttcctggagaagcagaaaggcactgagagtagcatg
caaataagtgctatggaagaaccacctgaggagcctgttataatgcagattcctgagatt
gcagctaagtgggcctga