GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:11:52

Sequence gi568815581f:72021392_72224384 : 202993 bp : 43.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   5958   5997   40                              -1.86
 1.01 Init +  15151  15200   50  0  2   83  103    70 0.986   8.42
 1.02 Intr +  17146  17228   83  1  2   71   85    43 0.321   1.58
 1.03 Intr +  23750  23863  114  0  0   71   65    56 0.063   2.02
 1.04 Intr +  30670  30753   84  2  0   85   47    57 0.027   1.09
 1.05 Term +  46125  46252  128  1  2   60   48    78 0.022  -0.56
 1.06 PlyA +  47479  47484    6                               1.05

 2.05 PlyA -  48562  48557    6                               1.05
 2.04 Term -  50399  50244  156  2  0   54   41   161 0.789   5.93
 2.03 Intr -  53299  53158  142  0  1   80  100    67 0.861   7.46
 2.02 Intr -  68090  67930  161  2  2   77   41   104 0.104   3.39
 2.01 Init -  73523  73485   39  2  0   90   72    -6 0.051  -1.73
 2.00 Prom -  76222  76183   40                              -3.86

 3.00 Prom +  76854  76893   40                              -4.56
 3.01 Init +  82286  82360   75  1  0   67   61    33 0.121  -0.41
 3.02 Intr +  85972  86106  135  0  0   22   80    71 0.231   0.46
 3.03 Intr +  95480  95603  124  1  1   98   41   105 0.870   6.96
 3.04 Intr +  95664  95941  278  1  2   90   40   136 0.659   6.24
 3.05 Intr +  99911 100431  521  1  2   43   75  1054 0.747  91.35
 3.06 Intr + 101328 101581  254  0  2   44  100   538 0.776  47.68
 3.07 Term + 102152 102996  845  0  2  112   55  1472 0.999 139.37
 3.08 PlyA + 103739 103744    6                               1.05

 4.00 Prom + 104784 104823   40                              -4.56
 4.01 Init + 108212 108284   73  1  1   55   77    25 0.249  -0.67
 4.02 Intr + 110293 110369   77  2  2   92  111    -7 0.187   1.23
 4.03 Term + 125282 125914  633  1  0  -55   38  1719 0.999 146.89
 4.04 PlyA + 126224 126229    6                               1.05

 5.00 Prom + 126566 126605   40                              -9.46
 5.01 Init + 127233 127320   88  2  1   67   96    84 0.688   7.90
 5.02 Term + 137232 137374  143  1  2  104   42    89 0.770   3.99
 5.03 PlyA + 138845 138850    6                               1.05

 6.00 Prom + 146330 146369   40                              -0.86
 6.01 Init + 151086 151122   37  2  1   71  119   -17 0.140   0.03
 6.02 Term + 159072 159187  116  1  2   93   46    92 0.393   4.23
 6.03 PlyA + 160337 160342    6                               1.05

 7.03 PlyA - 160546 160541    6                               1.05
 7.02 Term - 168220 167196 1025  2  2  -29   36  2364 0.782 211.78
 7.01 Init - 174352 174343   10  1  1   86   62     2 0.516  -1.84
 7.00 Prom - 175684 175645   40                              -7.46

 8.00 Prom + 175731 175770   40                              -2.66
 8.01 Init + 176018 176023    6  1  0   73  105    17 0.382   1.78
 8.02 Intr + 176683 176734   52  0  1  141   75    23 0.948   4.78
 8.03 Intr + 183679 183837  159  2  0   86   23   105 0.772   3.76
 8.04 Term + 185899 186029  131  2  2   72   52   112 0.691   4.34
 8.05 PlyA + 188855 188860    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_1|152_aa
MAEGKEKQVTSYMGSSSLYALKKQAAVLERPMWQGNEGGLQSMAGTKAHMEHFTFLIEEF
AFDISVTSVSQFGDHIEPSLSSGTWMTLEAIILSKLPQGQKARYCMFSLIECTVPLCHAP
WQYSRKFPPESQNMDDNDKRAITSASGDRYRV

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_1|459_bp
atggcagaaggcaaggagaagcaagttacatcttacatgggcagcagcagcttgtatgct
ttgaagaagcaagctgcagtgttggagaggcccatgtggcaaggaaatgagggtggcctc
cagtcaatggctggaacaaaagctcatatggagcatttcacattcttaatagaagagttt
gcctttgacatctcagtgaccagtgtgagtcaatttggagaccacattgaaccatctcta
tcttctgggacatggatgacgctggaagccatcattctgagcaaactaccacaaggacag
aaagccagatactgcatgttctcactcatagaatgcactgtgcccctctgccatgctccc
tggcaatattccagaaagttcccgcctgagtcccagaatatggatgacaatgacaagcgg
gctatcacctcagcttctggtgatagatacagagtgtaa

>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_2|165_aa
MKVVVGCSSGVIKPLVDQSISQFSFVLISLEEKVVAEAAPCVRKTTVPGLWLQPLFPLAF
PYGSVVSVRNGKEVTKRLAMDVITGCRNSGSEGNVHDYFIPPAALENQTQEPPKNPSFFM
ALANATNFSACSGSSQLMKGHPLVCFLAVSGPQEEAAARKKHVAK

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_2|498_bp
atgaaggtggtggttggatgctcttcaggagtgatcaagcctctggtggaccagagcatc
agccagttttcatttgtgttgatttccttggaagaaaaagttgtggcagaggctgcccca
tgtgtgcgaaagaccaccgttcctgggctgtggctgcagcctctgtttccgttagccttt
ccgtacggcagtgttgtcagtgtgagaaatggaaaggaggtcactaagagacttgcaatg
gatgtaataactggatgcagaaactctggatctgaagggaatgttcatgactatttcatc
cctcctgctgccttggagaaccaaacgcaggagccacccaagaatccttccttcttcatg
gcattggcaaatgccaccaacttctcagcctgctcagggtcaagccagctcatgaaagga
caccctctggtgtgctttctggctgtttcaggaccacaagaagaagcagcagctcgcaag
aaacatgttgctaaatag

>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_3|743_aa
MKFQIHQDRTLYESDKLCIQNKNEEPRPPETAEPPVSGNVSFVVLADGMFAVWDCFMQLI
LSKSLRFRVWLHDKPAGLVSDLGSGPYPRGALLCYSRPTPPDPARSPGQIGGKGRKLKRA
SWSAVLAESGFHSPEWHMPVNFPKSGSRVGRNTHAGMHKHRVFATVAGRSGGCDGTCTHS
GNTSTGDIYSISQQIFIAHLRRYLPRGEEPAPRVPEPPRLLAFPGHQPPAPGPRMNLLDP
FMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEE
DKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQ
YPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQ
AEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQ
PGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGV
PATHGQVTYTGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAP
PQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFNLP
HYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGV
PSIPQTHSPQHWEQPVYTQLTRP

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_3|2232_bp
atgaagtttcagatacaccaagacaggacactttatgagtcggataaattgtgtatccag
aataagaacgaagagccaaggcctccagagactgcagaaccaccagtctctggaaacgtc
tccttcgtcgtcctggctgacggcatgtttgcagtttgggactgttttatgcagctgatt
ctttccaagagtctgaggtttagggtttggctccacgacaagccagctggtctggtctct
gacttgggctccggtccgtacccccggggcgccctgctgtgttacagccgcccgacgccc
ccagacccggccaggtcaccagggcagattggaggaaagggaagaaaactgaaacgggcc
tcttggtctgcagttttagcggagtcgggattccacagccctgagtggcacatgccggtc
aacttcccaaagtcgggctcccgtgtggggagaaatacacacgcaggaatgcacaagcat
cgcgtgttcgcaactgtcgctgggaggtctggcggctgtgatgggacatgcactcactcg
ggcaacacgtccacaggtgacatctattcgatcagtcaacagatatttattgcgcaccta
cgacgctatctgccgaggggagaggagcccgcgcctcgagtccccgagccgccgcggctt
ctcgcctttcccggccaccagccccctgccccgggcccgcgtatgaatctcctggacccc
ttcatgaagatgaccgacgagcaggagaagggcctgtccggcgcccccagccccaccatg
tccgaggactccgcgggctcgccctgcccgtcgggctccggctcggacaccgagaacacg
cggccccaggagaacacgttccccaagggcgagcccgatctgaagaaggagagcgaggag
gacaagttccccgtgtgcatccgcgaggcggtcagccaggtgctcaaaggctacgactgg
acgctggtgcccatgccggtgcgcgtcaacggctccagcaagaacaagccgcacgtcaag
cggcccatgaacgccttcatggtgtgggcgcaggcggcgcgcaggaagctcgcggaccag
tacccgcacttgcacaacgccgagctcagcaagacgctgggcaagctctggagacttctg
aacgagagcgagaagcggcccttcgtggaggaggcggagcggctgcgcgtgcagcacaag
aaggaccacccggattacaagtaccagccgcggcggaggaagtcggtgaagaacgggcag
gcggaggcagaggaggccacggagcagacgcacatctcccccaacgccatcttcaaggcg
ctgcaggccgactcgccacactcctcctccggcatgagcgaggtgcactcccccggcgag
cactcggggcaatcccagggcccaccgaccccacccaccacccccaaaaccgacgtgcag
ccgggcaaggctgacctgaagcgagaggggcgccccttgccagaggggggcagacagccc
cctatcgacttccgcgacgtggacatcggcgagctgagcagcgacgtcatctccaacatc
gagaccttcgatgtcaacgagtttgaccagtacctgccgcccaacggccacccgggggtg
ccggccacgcacggccaggtcacctacacgggcagctacggcatcagcagcaccgcggcc
accccggcgagcgcgggccacgtgtggatgtccaagcagcaggcgccgccgccacccccg
cagcagcccccacaggccccgccggccccgcaggcgcccccgcagccgcaggcggcgccc
ccacagcagccggcggcacccccgcagcagccacaggcgcacacgctgaccacgctgagc
agcgagccgggccagtcccagcgaacgcacatcaagacggagcagctgagccccagccac
tacagcgagcagcagcagcactcgccccaacagatcgcctacagccccttcaacctccca
cactacagcccctcctacccgcccatcacccgctcacagtacgactacaccgaccaccag
aactccagctcctactacagccacgcggcaggccagggcaccggcctctactccaccttc
acctacatgaaccccgctcagcgccccatgtacacccccatcgccgacacctctggggtc
ccttccatcccgcagacccacagcccccagcactgggaacaacccgtctacacacagctc
actcgaccttga

>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_4|260_aa
MQLIRANWENRHREGGVDGFGNGFAKALNVVLFSIYLHYLGKCLTHNRSSKVKNKKKKKK
EKEEEEEKKKEKEEEKKKEEEEEEGKKKKKKKKKKKKKKEKEKEKEKEKEKEKEKKKKKK
KKEKEKEKEKEKEKKKKKKKKKKKKKKKKKEEEEEEEEEEEEKEKKKKKKEKEEEEKKKK
EEEEEGKKKKKKKKKKKKKEEEEEEEEKKQKQKQKKKKKKKKKKEEEEEGRKEGKGRRKE
EGRRRRRRRRRTRRRRKRRK

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_4|783_bp
atgcaactcattagagccaactgggagaacaggcacagggaaggaggagttgatggattt
ggaaatggttttgctaaggctttgaacgtcgtcttgttctcaatttatctccattacctg
ggaaagtgtttgacacataacaggagctcgaaagtaaaaaataagaagaagaagaagaag
gaaaaggaggaggaggaggagaagaagaaggaaaaggaggaggagaagaagaaggaggag
gaagaggaggaggggaagaagaagaagaagaagaagaagaagaagaagaagaagaaggag
aaggagaaggagaaggagaaggagaaggagaaggagaaggagaagaagaagaagaagaag
aagaaggagaaggagaaggagaaggagaaggagaaggagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaaggaggaggaggaggaggaggaggaggaggag
gaggagaaggagaagaagaagaagaagaaggaaaaggaggaggaggagaagaagaagaag
gaggaagaggaggaggggaagaagaagaagaagaagaagaagaagaagaagaagaaggag
gaggaggaggaggaggaggagaagaagcagaagcagaagcagaagaagaagaagaagaag
aagaagaagaaggaggaggaggaggagggaaggaaggaaggaaaaggaagaaggaaggaa
gaaggaagaaggaggagaagaagaagaaggaggacaaggaggagaagaaagaggagaaaa
taa

>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_5|76_aa
MGTNQVLSKRGPNPDTKRGFLDLAQERIQDAPLCHQQRRMVGPSGYLPYDFICKIQEKGL
GVALEPLINVEMGGED

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_5|231_bp
atgggtaccaaccaggtgttatcgaaaaggggtcccaatccagacaccaagagagggttc
ttggatcttgcacaagaaagaattcaggatgcccccttgtgccatcaacaaagacggatg
gttggaccctctggctaccttccatacgactttatttgcaaaatccaggaaaaaggactg
ggcgtggcattagaaccccttatcaatgtggagatgggcggggaagactaa

>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_6|50_aa
MELESQAPAPVSDFSVFTCNAKSCYGLKNKAAFFFVGLISGTLRKEHLGF

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_6|153_bp
atggagctagagagccaggcaccagctcctgtctctgactttagtgtcttcacctgcaat
gccaagagctgctatggcctgaaaaacaaggctgctttcttcttcgttggcctcatttca
ggcactctcaggaaagaacatctggggttctga

>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_7|344_aa
MVEEHASITTTLITIIITTTITTVIITTTINTTITMNTTTSIITAITITTTATTITTTII
TTIATTMNTITTTPTIITIMITINTVTITTTTTTTTITTTTTIITTTTITTIMITINTTT
TNTNTSIITTTIITTNTTTTIIITTITITTTITTIIITIIATIIITTIATTTNTTTTIIT
STTITTTTTITTIMVTIITTTTITINTTTITTIMITIITITMNITITMNTTTTIITTTIT
ITTTITTVIITTIATIIITTIATTNTTTIITTTIATIVITINTTITITTTTTTITITTTT
INTTTIVTTTTSTITTITTTTITMTATTTATFGPTLSTTITTSK

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_7|1035_bp
atggtggaagagcatgcctccattactaccaccctcatcaccatcatcattactaccact
atcaccaccgtcatcatcaccaccaccatcaacaccaccatcaccatgaacactaccacc
agcatcattactgccatcaccatcactactactgccaccaccatcactaccaccatcatc
accaccattgccaccaccatgaacaccatcaccaccacccccaccatcattaccatcatg
atcaccatcaacaccgtcaccatcaccaccaccactaccaccaccaccatcaccaccacc
accaccatcatcaccaccaccaccatcactactatcatgatcaccatcaacaccaccacc
accaacaccaacacctccatcatcactaccaccatcatcaccacgaacactaccaccacc
atcatcattaccactatcaccatcactactactattaccaccattatcatcaccatcatt
gccaccatcatcatcaccactattgccaccaccaccaacacaaccaccaccatcatcacc
agcaccaccatcaccaccaccaccaccatcactactatcatggtcaccattatcaccacc
accaccatcaccatcaacaccaccaccatcactactatcatgatcaccatcatcaccatc
accatgaacatcaccatcaccatgaacactaccaccaccatcatcactaccactatcacc
atcactactactattacgaccgttatcatcaccaccattgccaccatcatcatcaccacc
attgccaccaccaacaccaccaccatcatcaccaccaccatcgctaccatagtgatcacc
atcaacactaccatcaccatcaccactaccaccaccaccatcaccattaccactaccacc
atcaataccaccaccatcgttactaccaccacctccactatcactaccatcaccaccacc
actatcaccatgaccgccaccaccactgccacttttggtcccactctctctaccacaatt
accacctccaagtag

>gi568815581f:72021392_72224384|GENSCAN_predicted_peptide_8|115_aa
MLDTIESTHQAAQNSGNWPDQKKPQSVSTEDPCPSVSCRFCQAEKKFTRAPGWTVNGHRL
AAFTAGKVELHGVLVKNGTRSNYHQQRITLTVVEHRAWIQVLTQSDPKLTLLLRD

>gi568815581f:72021392_72224384|GENSCAN_predicted_CDS_8|348_bp
atgctggacacaattgagagtacacaccaggcggcacaaaacagtggcaactggccagat
cagaagaagcctcagagcgtgagcactgaagatccctgtccctctgtctcctgtcgcttc
tgccaggccgaaaaaaagtttacccgagcacctgggtggacggtgaatggtcatcgtttg
gcagcctttactgctggcaaagtggaattgcatggggtgctagtgaagaatggaacaaga
tccaactaccatcagcagaggataaccctcactgtcgtggagcacagggcatggattcag
gtgctgacccaatcagatccaaagctaacactgctgctaagagactga