GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:48:05

Sequence gi568815589f:99728043_99963864 : 235822 bp : 39.04% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1105   1100    6                               1.05
 1.05 Term -  11211  10945  267  0  0   44   35   175 0.208   2.31
 1.04 Intr -  16690  16644   47  2  2  113   47    52 0.027   0.81
 1.03 Intr -  26324  26172  153  0  0   90   56    56 0.036   1.72
 1.02 Intr -  32888  32653  236  1  2   22   11   234 0.116   5.51
 1.01 Init -  53486  53245  242  2  2   59   42   146 0.015   4.49
 1.00 Prom -  76084  76045   40                              -0.35

 2.00 Prom +  82310  82349   40                              -4.45
 2.01 Init +  93265  93603  339  0  0   19   12   247 0.037   7.51
 2.02 Intr +  93893  94117  225  1  0   89   59   131 0.034   7.56
 2.03 Intr +  94547  94754  208  1  1   71   21   180 0.052   7.33
 2.04 Intr +  95043  95219  177  1  0   67   69   200 0.630  14.97
 2.05 Intr +  97617  97790  174  1  0   90   96    78 0.833   7.79
 2.06 Intr +  98688  98759   72  1  0  103   86    12 0.575   0.96
 2.07 Intr +  99999 100255  257  1  2  102  -17   295 0.590  16.64
 2.08 Intr + 100454 100951  498  1  0  116  105   215 0.380  18.26
 2.09 Intr + 104647 104776  130  0  1   65   86   152 0.998  12.05
 2.10 Intr + 105240 105412  173  1  2   33   89   186 0.674  11.94
 2.11 Intr + 116607 116806  200  2  2   87   91   104 0.984   7.83
 2.12 Intr + 119395 119573  179  1  2  122  115   159 0.997  20.64
 2.13 Term + 135578 135825  248  0  2  123   37   221 0.646  15.47
 2.14 PlyA + 136495 136500    6                               1.05

 3.11 PlyA - 137165 137160    6                               1.05
 3.10 Term - 148067 147963  105  2  0   66   38    70 0.245  -2.77
 3.09 Intr - 153499 153105  395  2  2   -5   42   239 0.015   3.45
 3.08 Intr - 160287 160118  170  2  2    9   80   137 0.222   3.67
 3.07 Intr - 160612 160582   31  2  1   76   70    38 0.273  -2.93
 3.06 Intr - 161174 160850  325  2  1   64   61   172 0.333   6.52
 3.05 Intr - 166963 166838  126  1  0  115   84    49 0.418   7.16
 3.04 Intr - 168185 167969  217  1  1  101   23    54 0.039  -2.22
 3.03 Intr - 174021 173814  208  1  1   71   27   136 0.063   3.01
 3.02 Intr - 179118 178711  408  1  0   58   48   319 0.256  18.21
 3.01 Init - 180284 180236   49  2  1   52   19    62 0.257  -3.14
 3.00 Prom - 181227 181188   40                              -4.75

 4.00 Prom + 186120 186159   40                              -6.15
 4.01 Init + 187198 187320  123  0  0   27  105   122 0.795   8.02
 4.02 Intr + 195664 195834  171  0  0   55  100    77 0.523   4.82
 4.03 Intr + 200736 200801   66  2  0   76  110    63 0.228   5.48
 4.04 Intr + 223018 223243  226  0  1   66   40   339 0.409  23.54
 4.05 Intr + 231875 231990  116  0  2   51   80   107 0.150   5.45
 4.06 Intr + 232063 232113   51  0  0  103  101    19 0.112   2.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:99728043_99963864|GENSCAN_predicted_peptide_1|314_aa
MGYSGGPSLITRGLKSRRGRRRRQSKRCDNKAGLERCYVADFEDGEKECGLPLEDGQGKS
VTLSKASRRECSPTDTLILVQLHLHEEAEEEITGLEESKIQEKEWKEQGSKDLGGFMIKS
KGEGHDLARRRDIHFILEPKIERQNTIYSVKEFRGEEKGTSFSFICLNHFGALVILSVAN
LHYVVCFTGFTLLPLLLGNAPSSTPVSWFECTEEPVEGFEMGVRGGHMDNQQHRLLALQA
LVSEFNPEVTHNHVLDKGSPKTYNIGERQFNGQAIFPYLFSNLYSRNLLLYQEATYLDWI
TSVPDKNALTELEI

>gi568815589f:99728043_99963864|GENSCAN_predicted_CDS_1|945_bp
atgggttattctggggggcctagtttaatcacaagaggccttaaaagcagaagagggagg
agaagaagacagtcaaagagatgtgataataaagcagggttggagagatgttatgttgct
gattttgaagatggagaaaaagaatgtgggttgcctctagaagatggacaaggcaagtca
gtgactctctccaaagcttccagaagggaatgcagccctaccgacacgttgattttagta
caacttcatctacatgaggaggcagaagaagagatcactggtctggaggaatcaaagatt
caagaaaaagaatggaaggagcaaggaagtaaggatttgggagggttcatgatcaagagt
aaaggtgaaggacatgaccttgccagaaggagagacattcatttcatcctggagccaaag
attgaaaggcaaaatacaatatacagtgtgaaggaattcagaggggaagagaaaggaact
tcattctccttcatctgcctgaatcattttggggctctggttatactatctgtagcgaat
ctccattatgttgtctgcttcacgggtttcactcttcttccactccttctgggaaatgct
ccttctagcactcctgtcagttggtttgaatgcactgaggagccagtggagggttttgag
atgggtgtgaggggtgggcatatggataatcaacagcatagactattggcacttcaggca
cttgtcagcgaattcaatcctgaagtgactcataaccatgtgcttgacaaaggctcacct
aagacatataatatcggagagagacaatttaatggacaagccatctttccatatctcttc
tctaatctctattcaagaaatttgttattgtatcaggaagcaacatatctggactggatt
acctctgttcctgataaaaatgctctcactgagttagaaatttag

>gi568815589f:99728043_99963864|GENSCAN_predicted_peptide_2|959_aa
MQEESAAAPQGVFGLVPDAFCTGCQVTGAGQKLAGGAFPFGRAVLSLTPLALAPCLGAAS
EARQQHSSNSTPPEPDSWAVPPDPWAGRCTLPQTHALASGSAAKREAPRPGPALLLLLRS
PYTDALTPAPSLAHTDTSAHTGSAHTLRSPARSHPSCPEPLPVQRGAAAGRPSRAHFATL
TVPAVAVEWARGDLWSSWDSSPHSKRRKASNKEEDRDLCYSGSSDVIQGISALVVMVMML
SAAAAAAAAAAAGSCSSGGKSGVIGDSRTLTRVGTVSLSSGRWLGVGKACFFTDRTRAFG
EVAPSVLLLVEMKVLGEPTAEEGSPASPGPEPGPLAVPGSTAGASPRRTSAPPTLSASAG
ETPSPTIQRARYPPGPHHLFSSQDFIPYMHDSIRFGNVDMPCVQAQYSPSPPGSSYAAQT
YSSEYTTEIMNPDYTKLTMDLGSTEITATATTSLPSISTFVEGYSSNYELKPSCVYQMQR
PLIKAGALWDEALPSAPGCIAPGPLLDPPMKAVPTVAGARFPLFHFKPSPPHPPAPSPAG
GHHLGYDPTAAAALSLPLGAAAAAGSQAAALESHPYGLPLAKRAAPLAFPPLGLTPSPTA
SSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV
CLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPS
QPSPPSPPICMMNALVRALTDSTPRDLDYSRYCPTDQAAAGTDAEHVQQFYNLLTASIDV
SRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCL
RGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEELCNKITSSLK
DHQSKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSIIDKLFLDTLPF

>gi568815589f:99728043_99963864|GENSCAN_predicted_CDS_2|2880_bp
atgcaagaggaaagtgcagctgcacctcagggcgtcttcgggctggtgccagacgccttc
tgcaccggctgccaggtcactggagctggtcagaagctggctggcggagccttccctttc
ggaagagctgtcctctcccttacccccctcgccctggctccgtgcctcggggcagcctcg
gaggcgcgccagcagcactcctccaactctactccacccgagcctgacagctgggcggtc
ccgcctgacccgtgggcaggccgctgcaccctcccgcagacgcacgccctggcgagcggt
tccgctgcaaaaagagaagcccccaggccggggccggccctcctgctcctcctccgctcc
ccatacacagacgcgctcacacccgctccctcactcgcacacacagacacaagcgcgcac
acaggctccgcacacacacttcgctctcccgcgcgctcacacccctcttgccctgagccc
ttgccggtgcagcgcggcgccgcagctggacgcccctcccgggctcactttgcaacgctg
acggtgccggcagtggccgtggagtgggcccgcggggatctctggagctcgtgggattcc
tccccccactcgaagaggcgaaaagcctctaacaaagaggaggaccgggatttgtgctat
agcggctccagcgatgtaattcagggtatttcggctctagttgtcatggtaatgatgctc
tcggcggcggcggcggcggcggcagcggcagcggcagggagttgcagctccggaggtaaa
tcgggtgtaattggcgactcccgcacactgacacgtgtggggacggtgtccctctcctct
ggacgttggctcggtgtgggaaaggcatgctttttcacggacagaactcgcgcttttgga
gaagttgctccgagtgttttactcttagtagaaatgaaagttctcggtgagcccactgcg
gaagagggcagcccggcaagcccgggccctgagcctggacccttagcggtgccgggcagc
actgccggcgcttcgcctcgccggacgtccgctcctcctacactctcagcctccgctgga
gagacccccagccccaccattcagcgcgcaagataccctccaggccctcatcaccttttt
tcaagtcaagatttcatcccatacatgcatgactcaatcagatttggaaatgtggatatg
ccctgcgtccaagcccaatatagcccttcccctccaggttccagttatgcggcgcagaca
tacagctcggaatacaccacggagatcatgaaccccgactacaccaagctgaccatggac
cttggcagcactgagatcacggctacagccaccacgtccctgcccagcatcagtaccttc
gtggagggctactcgagcaactacgaactcaagccttcctgcgtgtaccaaatgcagcgg
cccttgatcaaagcgggggcgttatgggacgaggcactgccctcggcgcccggctgcatc
gcacccggcccgctgctggacccgccgatgaaggcggtccccacggtggccggcgcgcgc
ttcccgctcttccacttcaagccctcgccgccgcatccccccgcgcccagcccggccggc
ggccaccacctcggctacgacccgacggccgctgccgcgctcagcctgccgctgggagcc
gcagccgccgcgggcagccaggccgccgcgcttgagagccacccgtacgggctgccgctg
gccaagagggcggccccgctggccttcccgcctctcggcctcacgccctcccctaccgcg
tccagcctgctgggcgagagtcccagcctgccgtcgccgcccagcaggagctcgtcgtct
ggcgagggcacgtgtgccgtgtgcggggacaacgccgcctgccagcactacggcgtgcga
acctgcgagggctgcaagggctttttcaagagaacagtgcagaaaaatgcaaaatatgtt
tgcctggcaaataaaaactgcccagtagacaagagacgtcgaaaccgatgtcagtactgt
cgatttcagaagtgtctcagtgttggaatggtaaaagaagttgtccgtacagatagtctg
aaagggaggagaggtcgtctgccttccaaaccaaagagcccattacaacaggaaccttct
cagccctctccaccttctcctccaatctgcatgatgaatgcccttgtccgagctttaaca
gactcaacacccagagatcttgattattccagatactgtcccactgaccaggctgctgca
ggcacagatgctgagcatgtgcaacaattctacaacctcctgacagcctccattgatgta
tccagaagctgggcagaaaagattccgggatttactgatctccccaaagaagatcagaca
ttacttattgaatcagcctttttggagctgtttgtcctcagactttccatcaggtcaaac
actgctgaagataagtttgtgttctgcaatggacttgtcctgcatcgacttcagtgcctt
cgtggatttggggagtggctcgactctattaaagacttttccttaaatttgcagagcctg
aaccttgatatccaagccttagcctgcctgtcagcactgagcatgatcacagaaagacat
gggttaaaagaaccaaagagagtcgaagagctatgcaacaagatcacaagcagtttaaaa
gaccaccagagtaagggacaggctctggagcccaccgagtccaaggtcctgggtgccctg
gtagaactgaggaagatctgcaccctgggcctccagcgcatcttctacctgaagctggaa
gacttggtgtctccaccttccatcattgacaagctcttcctggacaccctacctttctaa

>gi568815589f:99728043_99963864|GENSCAN_predicted_peptide_3|677_aa
MDVKFSKGKSEEKQDMLLRASLPSSVASFLAVSPTAHLGHTHQTPPPANGCAGLSRDPDA
SDPGDPGPTARQRQDARRKLFHPATPGGRPARIVCGLPIPASNKASKNETKRGSATSEKQ
EEPPWRSHFGSNALLAAQRLLRAPHGRQAHQACLEALEENMVSWAGPRVLVRVQPRNLVP
CVSAAPAVAERGQCGAWAVVSEGASPKPWQLPRGFEPASAQKTIGSPQPRAGPKMLSGSQ
GLELGTLGSSLVLYFTVAELAPRPQDKVLSTLTSPFLKKKEFLPMATTTPGLWQAYRFSL
LTTRLLLEDGGGVVSAIQDCLSYPLQCPSLISCLNQPSSGLELSLRTKVKDEESPHQNLS
AGVFSYLRMSSPEIPLTGSSCQHILDPPDGLQLDLILKSVTVAEFQKGFKFLFVTTTPGS
LSPLIKVSIEQESTYFIFRLGPFQERAEKAAGSSHKADYENRIGFFVSALCVCTIQMQSD
VIVAVIGDEDIIIDFEEIGQHLTELAGEGLTEENLGNTIQDIGTGKDFMSETPKAMATKA
KIDKWDLIKLKSFCTPKETIIRVNRPPTEWEKIFANYLSDKGLISRIYKELKQIYKKKTN
NPIKKWVKDMNRHFSKEDIYAGNRHMKKCSSSLAIREMQIKTTGNGSPNVVPFPTNSWTP
LQATKSESLVTNIKKLF

>gi568815589f:99728043_99963864|GENSCAN_predicted_CDS_3|2034_bp
atggatgtgaaatttagcaagggaaagtctgaggagaaacaggatatgctcctccgagcc
tcactaccatcgagcgtcgcgtcattcctcgcagtgtcacccacagcacacctgggccac
acacaccaaacgcccccaccagcgaacggatgcgcgggtctgtcccgggacccagacgcc
agcgaccctggcgacccggggcctacagcgcgccagagacaggacgcgcgccggaaactt
ttccaccccgcgaccccgggaggccgtcctgctcgcatcgtctgcggcctccctatacca
gcttccaataaagcttccaaaaacgaaaccaagcgaggctccgccacttctgaaaaacag
gaggagccaccatggcgctcgcacttcggatccaatgccctacttgccgcccagcgcctc
ttgcgcgcgccacacgggcgccaggcccaccaagcctgcctggaggccttggaggaaaat
atggtttcatgggctggaccaagggtcctcgtgcgtgtacagcctaggaacttggtgccc
tgtgtctcagctgctccagctgtggctgaaaggggccaatgtggagcttgggctgtggtt
tcagagggtgcaagccccaagccttggcagcttccacgtggttttgagcctgcaagtgca
cagaagactataggctcccctcagcccagggcaggtccaaaaatgctatctgggagccag
ggcctggagctgggaaccttaggcagctccttagtgctctattttactgtggctgagcta
gcacctaggccacaagataaagtcctttccactcttacctctcctttcctcaagaagaag
gagtttctccccatggccaccaccaccccaggcctatggcaagcatacagattctctctc
ctcaccacgcggctgctgctggaggatggaggaggggtggtgtcagcaattcaagactgt
ctttcctaccctcttcagtgcccttccttgataagctgtttaaaccagccttcttctggc
ttggagctgtcactcagaaccaaggtgaaggatgaagagtctcctcatcaaaatctctct
gctggggtcttttcctacctgaggatgtcttcaccagaaattcccctaactggcagctct
tgtcaacacattctggatccccctgatggactccagctagacttgattcttaaatcagtc
actgtagcagagtttcagaaaggatttaagttccttttcgtcaccactactcctggttct
ctttcaccattgatcaaagtgtccatagagcaggagagtacatactttattttcagatta
gggccgtttcaggagagagcggagaaagcagcagggtcctcacacaaggctgattatgag
aatagaattggattttttgtgtctgcactttgtgtctgcacaatacaaatgcaaagtgat
gttattgtagctgttattggtgatgaagatattattattgattttgaagaaattggccag
catttaacagagctggcaggggaaggccttacagaagaaaacctaggcaataccattcag
gacataggcacgggcaaggacttcatgtctgaaacaccaaaagcaatggcaacaaaagcc
aaaatagacaaatgggatctaattaaactaaagagcttctgcacaccaaaagaaactatc
atcagagtgaacaggccacctacagaatgggagaaaatttttgcaaactacttatctgac
aaagggctaatatccagaatctacaaagaactcaaacaaatttacaagaaaaaaacgaac
aaccccatcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttat
gcaggcaacaggcacatgaaaaaatgctcatcgtcactggccatcagagaaatgcaaatc
aaaaccacaggtaatggttctccaaatgtggtccccttcccaacaaattcatggactcca
cttcaggcaaccaaatcagaatctctggtcacgaatatcaagaaactgttttaa

>gi568815589f:99728043_99963864|GENSCAN_predicted_peptide_4|251_aa
MSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKSQVQALGTSKQPASSWSSH
DPFLGLINLLGWLTELRETIYQFFIKDITRDTAEEMHKYQRCRIWDKLHEEHINAGRTVQ
QLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQFNDE
ETLLQPPLTRSMTVGGAFHTTEAEASSQSLTQIYALPEIPQDQNAAESWETLEADLIELS
QLVTDFSLLVN

>gi568815589f:99728043_99963864|GENSCAN_predicted_CDS_4|753_bp
atgtctgaagatgaagaaaaagtgaaattacgccgtcttgaaccagctatccagaaattc
attaagatagtaatcccaacagacctggaaaggttaagaaagcaccagataaatattgag
aagtcacaagtccaggcccttggaacttctaaacaaccagcttcaagttggagttcccac
gatccctttttgggcttgattaatttgctgggatggctcacagaactcagggagacaatt
taccagttctttataaaggatattacaagggatacagctgaagagatgcataagtatcaa
aggtgcagaatctgggacaagttgcatgaagagcatatcaatgcaggacgtacagttcag
caactccgatccaatatccgagaaattgagaaactttgtttgaaagtccgaaaggatgac
ctagtacttctgaagagaatgatagatcctgttaaagaagaagcatcagcagcaacagca
gaatttctccaactccatttggaatctgtagaagaacttaagaagcaatttaatgatgaa
gaaactttgctacagcctcctttgaccagatccatgactgttggtggagcatttcatact
actgaagctgaagctagttctcagagtttgactcagatatatgccttacctgaaattcct
caagatcaaaatgctgcagaatcgtgggaaaccttagaagcggacttaattgaacttagc
caactggtcactgacttctctctcctagtgaat