GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:29:29

Sequence gi568815591f:17199265_17443061 : 243797 bp : 36.80% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  17069  17260  192  1  0   48   54   213 0.679   8.79
 1.02 PlyA +  18212  18217    6                               1.05

 2.00 Prom +  18383  18422   40                              -6.15
 2.01 Sngl +  18476  19357  882  1  0   49   41   420 0.659  29.17
 2.02 PlyA +  19451  19456    6                              -0.45

 3.00 Prom +  19675  19714   40                             -11.84
 3.01 Init +  19759  21437 1679  0  2   39   53   458 0.218  28.53
 3.02 Intr +  27747  27811   65  0  2   62   92    38 0.038  -0.96
 3.03 Intr +  57925  58074  150  2  0   36   72   141 0.227   6.51
 3.04 Intr +  71854  72024  171  2  0   42   24   153 0.381   3.29
 3.05 Term +  75068  75165   98  0  2   78   49   111 0.484   3.35
 3.06 PlyA +  76738  76743    6                               1.05

 4.00 Prom +  82256  82295   40                              -6.15
 4.01 Init + 100001 100065   65  1  2  105   92   138 0.948  16.57
 4.02 Intr + 110672 110859  188  2  2   96   95   154 0.999  15.31
 4.03 Intr + 123237 123343  107  1  2   95   99    57 0.997   6.51
 4.04 Intr + 128495 128584   90  1  0  101  111     1 0.884   2.97
 4.05 Intr + 130688 130811  124  1  1   76  116   152 0.993  16.04
 4.06 Intr + 131492 131627  136  0  1   69   82    21 0.512  -1.69
 4.07 Intr + 133070 133205  136  2  1   53   29   115 0.562   1.75
 4.08 Intr + 134648 134850  203  1  2   88  108   124 0.975  11.56
 4.09 Intr + 135623 135732  110  2  2   70  100    54 0.999   3.81
 4.10 Intr + 136381 136522  142  2  1   69   85   116 0.730   7.89
 4.11 Intr + 139722 140964 1243  0  1   34  116   739 0.588  57.66
 4.12 Term + 143657 143800  144  1  0   63   31    89 0.437  -2.37
 4.13 PlyA + 143862 143867    6                               1.05

 5.03 PlyA - 144559 144554    6                               1.05
 5.02 Term - 147340 147312   29  2  2   58   38    15 0.161  -9.24
 5.01 Init - 147967 147826  142  1  1   83  107   127 0.775  14.44
 5.00 Prom - 150198 150159   40                              -4.95

 6.02 PlyA - 151330 151325    6                               1.05
 6.01 Sngl - 154312 154010  303  1  0   77   54   204 0.647  11.48
 6.00 Prom - 173727 173688   40                              -4.35

 7.05 PlyA - 173861 173856    6                               1.05
 7.04 Term - 191647 191537  111  1  0  111   48   141 0.980   9.98
 7.03 Intr - 195125 194921  205  1  1   43   39   149 0.327   3.78
 7.02 Intr - 200279 200215   65  2  2  117   54   104 0.303   6.50
 7.01 Init - 211784 211770   15  2  0   68  110    10 0.104   1.48
 7.00 Prom - 212578 212539   40                              -6.95

 8.00 Prom + 216454 216493   40                              -2.55
 8.01 Sngl + 219612 220085  474  2  0   49   43   208 0.636   8.48
 8.02 PlyA + 220530 220535    6                               1.05

 9.03 PlyA - 221893 221888    6                               1.05
 9.02 Term - 235236 235090  147  0  0   40   41   144 0.637   1.82
 9.01 Init - 241408 241034  375  1  0   75   75   164 0.432  10.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_1|63_aa
MENDFDKLREEGFRGSNSSELKEEVRTHRKEVKNLEKKLDEWLTRITNAEMSLKDLMELK
TTA

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_1|192_bp
atggagaatgactttgacaagttgagagaagaaggcttcagaggatcaaactcctccgag
ctaaaggaggaagttcgaacccatcgcaaagaagttaaaaaccttgaaaaaaaattagac
gaatggctaactagaataaccaatgcagagatgtccttaaaggacctgatggagctgaaa
accaccgcatga

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_2|293_aa
MGDFNTPLSTLDRSMRQKVNKDIQELNSALHQADLTDTYRTLYPKSTEYTFFSAPHHTYP
KIDHIVGSKALLSKCKRTEIITNYLSDHSAIKLELRIKKLTQNCSTAWKLNNLLLNDCWV
HNEMKAEIKMFFETNKNKDTTYQNLWDTFKAVCRGKFIALNIHKRKQERSKIDTLTSQLK
ELEKQEQTHSKVSRRQEITKIRAELKEIETQNTLQKINEARSWFFETINKIDRPLARLIK
KKREKNQIDEIRNDKGDITTNPTEIETTIREYYKHLYANKLENLEEMDKFLDT

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_2|882_bp
atgggagactttaacaccccactgtcaacattagacagatcaatgagacagaaagttaac
aaggatatccaggaattgaactcagctctgcaccaagcagacctaacagacacctacaga
actctctaccccaaatcaacagaatatacattcttttcagcaccacaccacacctatccc
aaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaactgctcaactgcatggaaactgaacaacctgctcctgaatgactgttgggta
cataatgaaatgaaggcagaaataaagatgttctttgaaaccaacaagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcacta
aatatccataaaagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaagttagcagaaggcaagaaataactaag
atcagagcagaactgaaggaaatagagacacaaaacacccttcaaaaaatcaatgaagcc
aggagctggttttttgaaacgatcaacaaaattgatagaccactagcaagactaataaag
aagaagagagagaagaatcaaatagatgaaataagaaatgacaaaggggatatcaccacc
aatcccacagaaatagaaactaccatcagagaatactataaacacctctatgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatag

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_3|720_aa
MQGWLNIFKSINVIHHINRTNDKNHTIISIDAEKAFDKIQHPFMLKTLNKLGIDGTYLKI
TRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNVVLEVLARAIRQEKEIKGIQ
LGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQASLYTNNRQT
ESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGR
INIVKMAILPKVIYRFNAIPIKLPMTSFTELEKTTLKFIWNQKRAHITKSILSQKNKAGG
ITLPEFKLHYKAAVTKTAWYWYQNRDIDQWNRTEPSEIMLHIYNHLIFDKPEKNKKWGNN
SLFSRWCWEDWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGSTIQDIG
MGKDFMSKTPKTMATKAKIDKWDLIKLKSFCTAEETTIRVNRQPTEWEKIFAIYSSDKGL
ISRIYNELQQIYKKRTNNPIKKWAKHMNRHFSKEDIYAANRHMKKCSSSLAIREMQIKTT
MRYHLTPVRMAIIKKSGNDREERQTWFVVKETSSLQERQESGRKDDVGKEKSSSDSVFEC
EVFVGLSRRDVQEALNLCMSWFRREIWAKDAGIGAQCGHGAGIWSMGICKQTADCCCKVW
NNMPMHIPALAMALVSMMQELREKPLSQGSPSPSTMSGRNLRSVPDADASAMLLIQFVEL

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_3|2163_bp
atgcaaggctggctcaacatattcaaatcaataaacgtaatccatcatataaacagaacc
aacgacaaaaaccacacaattatctcaatagatgcagaaaaggcctttgacaaaattcaa
catcccttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaaata
acaagagctatctatgacaaacccacagccaatatcatactgaatggacaaaaactggaa
gcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaat
gtagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtattcaa
ttaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaa
aaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctca
ggatataaaatcaatgtgcaaaaatcacaagcatccttatacaccaataacagacaaaca
gagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaataccta
ggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctc
aatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaaga
atcaatatcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatcccc
atcaagttaccaatgacttccttcacagaattggaaaaaactactttaaagttcatatgg
aatcaaaaaagagcccacatcaccaagtcaatcctaagccaaaagaacaaagctggaggc
atcacgctacctgagttcaaactacactacaaggctgcagtaaccaaaacagcatggtac
tggtatcaaaacagagatatagaccaatggaacagaacagagccctcagaaataatgctg
catatctacaaccatctgatctttgacaaacctgagaaaaacaagaaatggggaaacaat
tccctgtttagtagatggtgctgggaagactggctagccatatgtagaaagctgaaactg
gatcccttccttacaccttatacgaaaattaattcaagatggattaaagacttaaatgtt
agacctaaaaccataaaaaccctagaagaaaacctaggcagtaccattcaggacataggc
atgggcaaggacttcatgagtaaaactccaaaaacaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcagaagaaactaccatcagagtg
aacaggcaacctacagaatgggagaaaatttttgcaatctactcatctgacaaagggcta
atatccagaatctataatgaactccaacaaatttacaagaaaagaacaaacaaccccatc
aaaaagtgggcaaaacatatgaacagacatttctcaaaagaagacatttatgcagccaac
agacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacgacagg
gaggaaaggcagacgtggtttgttgtgaaggagacaagcagcctgcaggagagacaggaa
tcaggtagaaaagatgacgtgggaaaagagaagagtagttcagattcagtgtttgaatgt
gaggtgtttgtgggactttcaaggagagatgtccaggaagcactgaacttgtgcatgtca
tggtttaggagagaaatctgggctaaagatgcaggaataggtgctcagtgtggccatgga
gctgggatctggagcatgggcatatgcaagcagactgcagactgttgttgcaaggtatgg
aacaatatgcctatgcacatacctgctctagcaatggctctggtgtctatgatgcaggaa
ctcagagagaagccattgagccagggctccccttcaccttccacaatgagtggacggaat
ctgaggtctgtaccagatgcagatgccagtgccatgcttctaatacagtttgtagaacta
taa

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_4|895_aa
MNSSSANITYASRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDV
INKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNLQEGEFLLQ
ALNGFVLVVTTDALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNP
SQCTESGQGIEEATGLPQTVVCYNPDQIPPENSPLMERCFICRLRCLLDNSSGFLVRIRL
TVKQAQAGPSGNIPKEGIVITGDDSSMHVIAPADLPVGQDVEAMNFQGKLKYLHGQKKKG
KDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFTPIGCDAKGRIVLGYTEA
ELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTKNNRWTWVQSNARLLYKN
GRPDYIIVTQRPLTDEEGTEHLRKRNTKLPFMFTTGEAVLYEATNPFPAIMDPLPLRTKN
GTSGKDSATTSTLSKDSLNPSSLLAAMMQQDESIYLYPASSTSSTAPFENNFFNESMNEC
RNWQDNTAPMGNDTILKHEQIDQPQDVNSFAGGHPGLFQDSKNSDLYSIMKNLGIDFEDI
RHMQNEKFFRNDFSGEVDFRDIDLTDEILTYVQDSLSKSPFIPSDYQQQQSLALNSSCMV
QEHLHLEQQQQHHQKQVVVEPQQQLCQKMKHMQVNGMFENWNSNQFVPFNCPQQDPQQYN
VFTDLHGISQEFPYKSEMDSMPYTQNFISCNQPVLPQHSKCTELDYPMGSFEPSPYPTTS
SLEDFVTCLQLPENQKHGLNPQSAIITPQTCYAGAVSMYQCQPEPQHTHVGQMQYNPVLP
GQQAFLNKFQNGVLNETYPAELNNINNTQTTTHLQPLHHPSEARPFPDLTSSGFL

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_4|2688_bp
atgaacagcagcagcgccaacatcacctacgccagtcgcaagcggcggaagccggtgcag
aaaacagtaaagccaatcccagctgaaggaatcaagtcaaatccttccaagcggcataga
gaccgacttaatacagagttggaccgtttggctagcctgctgcctttcccacaagatgtt
attaataagttggacaaactttcagttcttaggctcagcgtcagttacctgagagccaag
agcttctttgatgttgcattaaaatcctcccctactgaaagaaacggaggccaggataac
tgtagagcagcaaatttcagagaaggcctgaacttacaagaaggagaattcttattacag
gctctgaatggctttgtattagttgtcactacagatgctttggtcttttatgcttcttct
actatacaagattatctagggtttcagcagtctgatgtcatacatcagagtgtatatgaa
cttatccataccgaagaccgagctgaatttcagcgtcagctacactgggcattaaatcct
tctcagtgtacagagtctggacaaggaattgaagaagccactggtctcccccagacagta
gtctgttataacccagaccagattcctccagaaaactctcctttaatggagaggtgcttc
atatgtcgtctaaggtgtctgctggataattcatctggttttctggtaagaataaggtta
actgtaaaacaggctcaggcaggtccttcaggaaatattccaaaagaaggcattgttatc
acaggagatgacagctccatgcatgttattgcccccgcagaccttccagtgggacaagat
gtagaggcaatgaatttccaagggaagttaaagtatcttcatggacagaaaaagaaaggg
aaagatggatcaatacttccacctcagttggctttgtttgcgatagctactccacttcag
ccaccatccatacttgaaatccggaccaaaaattttatctttagaaccaaacacaaacta
gacttcacacctattggttgtgatgccaaaggaagaattgttttaggatatactgaagca
gagctgtgcacgagaggctcaggttatcagtttattcatgcagctgatatgctttattgt
gccgagtcccatatccgaatgattaagactggagaaagtggcatgatagttttccggctt
cttacaaaaaacaaccgatggacttgggtccagtctaatgcacgcctgctttataaaaat
ggaagaccagattatatcattgtaactcagagaccactaacagatgaggaaggaacagag
catttacgaaaacgaaatacgaagttgccttttatgtttaccactggagaagctgtgttg
tatgaggcaaccaacccttttcctgccataatggatcccttaccactaaggactaaaaat
ggcactagtggaaaagactctgctaccacatccactctaagcaaggactctctcaatcct
agttccctcctggctgccatgatgcaacaagatgagtctatttatctctatcctgcttca
agtacttcaagtactgcaccttttgaaaacaactttttcaacgaatctatgaatgaatgc
agaaattggcaagataatactgcaccgatgggaaatgatactatcctgaaacatgagcaa
attgaccagcctcaggatgtgaactcatttgctggaggtcacccagggctctttcaagat
agtaaaaacagtgacttgtacagcataatgaaaaacctaggcattgattttgaagacatc
agacacatgcagaatgaaaaatttttcagaaatgatttttctggtgaggttgacttcaga
gacattgacttaacggatgaaatcctgacgtatgtccaagattctttaagtaagtctccc
ttcataccttcagattatcaacagcaacagtccttggctctgaactcaagctgtatggta
caggaacacctacatctagaacagcaacagcaacatcaccaaaagcaagtagtagtggag
ccacagcaacagctgtgtcagaagatgaagcacatgcaagttaatggcatgtttgaaaat
tggaactctaaccaattcgtgcctttcaattgtccacagcaagacccacaacaatataat
gtctttacagacttacatgggatcagtcaagagttcccctacaaatctgaaatggattct
atgccttatacacagaactttatttcctgtaatcagcctgtattaccacaacattccaaa
tgtacagagctggactaccctatggggagttttgaaccatccccataccccactacttct
agtttagaagattttgtcacttgtttacaacttcctgaaaaccaaaagcatggattaaat
ccacagtcagccataataactcctcagacatgttatgctggggccgtgtcgatgtatcag
tgccagccagaacctcagcacacccacgtgggtcagatgcagtacaatccagtactgcca
ggccaacaggcatttttaaacaagtttcagaatggagttttaaatgaaacatatccagct
gaattaaataacataaataacactcagactaccacacatcttcagccacttcatcatccg
tcagaagccagaccttttcctgatttgacatccagtggattcctgtaa

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_5|56_aa
MEEDLFTGNPTEKESLSESRCRSCVHENERGRGLTLEFRKLSSSHTGGFSMNVQQL

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_5|171_bp
atggaggaggacctattcacaggaaatcctacagagaaggagagcctctcagaaagcagg
tgtcgaagctgtgtgcatgagaacgagagaggacgggggctaaccctggagttcaggaaa
ctctcctcctcacatactggagggttttccatgaatgttcaacagttatga

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_6|100_aa
MGRNQCKKAENSKNQNTSSTPKDHNSSPEREQNWMENEFDELTEVSFRRWVITNSSELKE
HVLTQCKEAKNLEKRLDKLLTRITSLEKNINDLMELKNTA

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_6|303_bp
atggggagaaaccagtgcaaaaaggctgaaaattccaaaaaccagaatacctcttctact
ccaaaggatcacaactcctcgccagaaagggaacaaaactggatggagaatgagtttgat
gaattgacagaagtaagcttcagaaggtgggtaataacaaactcctctgagctaaaggag
catgttctaacccaatgcaaggaagctaagaaccttgaaaaaaggttagacaaattgcta
actagaataaccagtttagagaagaacataaatgacctgatggagctgaaaaacacagca
tga

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_7|131_aa
MISARPTQHEDEEHEDLYDDPLPFSECGAVRRGPLSFRPQNGGSMDSLSCAPGKATDTQC
QPMKAARRETVPCKATGVELPKTMGTYFLHQHDLDLHFLVDKGGQEEAVNEGESYLIGTV
NRALVPASHGR

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_7|396_bp
atgatatctgctaggcctactcaacatgaagatgaagagcatgaagacctttatgatgat
ccacttccatttagtgaatgtggagctgtgagaagagggccactatccttcagaccccag
aatggtggatccatggacagcttgtcctgtgcacctggaaaagccacagacactcaatgc
cagcccatgaaagcagccaggagggagactgtaccctgcaaagccacaggggtagagctg
cccaagaccatgggaacctacttcttgcatcagcatgacctagatctgcattttctggtg
gacaaaggaggacaggaagaagcagtaaatgaaggggagtcttatttgattggcacagtt
aacagggcactggtacccgctagtcatggcagatga

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_8|157_aa
MPRVRKLKYLLVWVDTFTGWVEAFPTGSEKSTAIISSLLSDIIPWFGLPTSIQSNNRPAF
ISQITQAVSQALGIQWNRHNPYRSQSSGKVKWTIGLLKTHLTKLSLQLKKDWTILLPLAL
LRIQACPQDATGYSPFELLYGRSILLGPSIIPDTSPT

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_8|474_bp
atgccccgagtcaggaaactaaaatacctcttggtctgggtagacactttcactggatgg
gtagaggcctttcccacagggtctgagaagtccactgcaatcatttcttcccttctgtca
gacataattccttggtttggccttcccacgtctatacagtccaataacagaccagctttt
attagtcaaatcacccaagcagtttctcaggctcttggtattcagtggaaccgtcataac
ccttaccgttctcaatcttcaggaaaggtaaaatggactattggtcttttaaaaacacac
ctcaccaagctcagcctccaacttaaaaaggactggacaatacttttaccacttgccctt
ctcagaattcaggcctgtcctcaggatgctacagggtacagcccatttgagctcctgtat
ggacgttccattttattaggccccagtatcattccagacaccagcccaacttga

>gi568815591f:17199265_17443061|GENSCAN_predicted_peptide_9|173_aa
MLVVIWTIKFRLKCSQMEMRNLLGTRAKVILPYPKRLEAFCPCPGDLWNFELERDDLGYL
AQEISKWQSIQAETEHKSLENLQPDNAIEKKNPFSGEKFKPAAELCISNKELNVNHQDNG
ENVSRNLGTLISKSKMDTLGLKNAAKTHKCQVLATEQAVQLEETRGIPKPFVL

>gi568815591f:17199265_17443061|GENSCAN_predicted_CDS_9|522_bp
atgctggtagtgatatggacaataaagttcaggctgaagtgctctcagatggaaatgagg
aacttgttgggaactagagcaaaggtcattcttccctatccaaagagattggaggcattt
tgcccctgccctggagatctgtggaactttgaacttgagagagatgatttagggtatctg
gcacaagaaatttctaagtggcaaagcattcaagcggaaacagagcataaaagcttggaa
aatttgcagcctgacaatgcgatagaaaagaaaaacccattttctggggagaaattcaag
cctgctgcagaactttgcataagtaacaaggagctgaatgttaatcaccaagacaatggg
gaaaatgtttccaggaatctgggaactcttatatccaagagcaagatggatacacttgga
ttgaaaaatgcagccaagacccacaaatgccaagtccttgccacagaacaagctgtccag
ctggaagaaactagaggaatccccaaaccatttgtcctctga