GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:27:48

Sequence gi568815597f:87232016_87440204 : 208189 bp : 40.67% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8991   9058   68  2  2   88  106    65 0.920   8.91
 1.02 Intr +  11006  11134  129  2  0  126   44    20 0.489   0.29
 1.03 Intr +  13690  13903  214  1  1   65   52   107 0.450   2.60
 1.04 Intr +  14412  14458   47  2  2   48   92    48 0.425  -2.51
 1.05 Intr +  14738  15032  295  2  1   70   55   143 0.170   5.29
 1.06 Intr +  24371  24494  124  1  1   47   84   126 0.214   7.34
 1.07 Intr +  33687  33719   33  1  0   74  107    35 0.036   1.28
 1.08 Intr +  43376  43435   60  0  0   69   77    56 0.131   0.39
 1.09 Term +  51261  51391  131  1  2   77   49   131 0.437   5.46
 1.10 PlyA +  52846  52851    6                               1.05

 2.00 Prom +  59465  59504   40                              -6.15
 2.01 Init +  60641  60683   43  1  1   57   65    66 0.454   1.84
 2.02 Term +  62443  62630  188  2  2   18   53   230 0.872   9.17
 2.03 PlyA +  63433  63438    6                               1.05

 3.04 PlyA -  64294  64289    6                               1.05
 3.03 Term -  68517  68280  238  2  1   -4   40   271 0.204   7.76
 3.02 Intr -  73365  73275   91  1  1   67  116    25 0.365   1.33
 3.01 Init -  77580  77505   76  0  1   99   62    71 0.552   6.90
 3.00 Prom -  83301  83262   40                              -8.65

 4.00 Prom +  84780  84819   40                              -5.15
 4.01 Init +  96007  96057   51  0  0   67  115    21 0.665   3.91
 4.02 Intr +  97131  97229   99  2  0   94  110    29 0.839   5.09
 4.03 Intr +  99998 100236  239  1  2  111   82   217 0.905  18.89
 4.04 Intr + 102470 102545   76  2  1   61   72    92 0.979   3.50
 4.05 Intr + 103156 103288  133  0  1   82   39   136 0.786   7.40
 4.06 Intr + 104258 104363  106  0  1  101   74    10 0.808  -0.75
 4.07 Intr + 107521 107617   97  1  1   97   62    98 0.867   7.19
 4.08 Intr + 108032 108187  156  1  0   99   63   113 0.976   9.19
 4.09 Intr + 118111 118229  119  0  2   66   43    98 0.014   1.44
 4.10 Intr + 121246 121297   52  1  1   88   93    37 0.007   2.19
 4.11 Intr + 123717 123861  145  2  1   48   80    59 0.002   0.03
 4.12 Intr + 129457 129671  215  2  2   68  103    99 0.008   6.91
 4.13 Intr + 132387 132488  102  2  0  111  103    17 0.007   4.95
 4.14 Term + 132729 132743   15  2  0   79   48    -6 0.003  -8.24
 4.15 PlyA + 133029 133034    6                               1.05

 5.02 PlyA - 133359 133354    6                               1.05
 5.01 Sngl - 135010 134438  573  1  0   52   55   254 0.914  14.41
 5.00 Prom - 147856 147817   40                              -4.45

 6.03 PlyA - 147903 147898    6                               1.05
 6.02 Term - 153543 153304  240  0  0   49   49   219 0.701   9.14
 6.01 Init - 156367 156350   18  1  0   74   85    16 0.287  -0.31
 6.00 Prom - 156558 156519   40                              -2.55

 7.00 Prom + 159522 159561   40                              -6.15
 7.01 Init + 165559 165651   93  0  0   51   89    72 0.380   4.03
 7.02 Term + 173510 173575   66  1  0  101   40   123 0.715   5.76
 7.03 PlyA + 173710 173715    6                               1.05

 8.04 PlyA - 173897 173892    6                               1.05
 8.03 Term - 178078 177963  116  2  2   29   42   115 0.873  -1.25
 8.02 Intr - 178902 178777  126  1  0  109  103    76 0.315  10.93
 8.01 Init - 193809 193800   10  0  1  103  119     3 0.060   5.66
 8.00 Prom - 194460 194421   40                              -7.15

 9.03 PlyA - 194576 194571    6                               1.05
 9.02 Term - 195402 195185  218  1  2   47   54   188 0.391   7.62
 9.01 Init - 199350 199200  151  0  1   69   44    89 0.224   2.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 185325 185260   66  0  0  129   39   105 0.895   6.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_1|366_aa
MEAWGSRDRVALPSGFGCVGFGKIGRESCPAVRHCFLPLTGYTGSHFADKTSIKFCEIVA
SIGVERWHHVNEFWPIDVARSNVYHFQAWPTKSPYATLHGLSSYIHWLNGEDSVDLEYSG
PRGEKECRSLNEQRVCRVTAQAFRILTLKRVDGVILLPHGDHSGELTVQQVSYFLVPPKE
HPGISEYFPYKDGDSSKPTQACFQPNHDFALIRPPRVGCGGGDSTLQGFFSEIQRRTRAS
FLLVLWQTGSKSSHHAVISPSETGRPGGEELRLSSGQLRLSSQPKASINYQPCRDMGTEK
VEGATEIEHQAIVLHELVGLYLEGMDTHRKQANQNLSLGFSELEPREDCLSPSDGSSPCM
PDSGAF

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_1|1101_bp
atggaggcctggggcagcagggaccgagtggcactgccatctggctttggttgcgtgggc
tttggaaaaattggaagggaatcctgccctgccgttaggcactgctttctccctttgact
ggttatactggaagtcattttgcagataagaccagcattaagttttgtgaaatagtggcg
tccattggtgttgaaaggtggcatcatgtcaatgagttctggccaatagatgttgccaga
agcaatgtgtaccatttccaggcctggcccacaaaatcaccctatgcaaccctccatggt
ctctcctcctatattcactggttgaatggagaggactctgtagatttggagtatagtgga
cccagaggagagaaagagtgtagatctctaaatgagcaaagagtttgtagagtaactgct
caggctttcagaatcctcacgctcaagagggtcgatggggtcattttgctcccccatggt
gaccactctggcgagctgactgttcagcaagtcagttactttctcgttcctcctaaagag
catccaggaatttctgagtattttccatacaaggatggagactccagcaaaccaactcag
gcctgctttcagcctaatcatgactttgctctgatacggccaccacgtgttgggtgtggg
ggtggggacagtactctgcaaggtttcttctcagagattcagagaaggacaagggcctct
tttcttttggttttgtggcagacaggctctaagtctagccatcatgctgtgataagccca
agtgaaacagggagaccaggtggagaagaactgaggctctccagtggacagctcagatta
agctcccaaccaaaagccagcatcaactatcagccatgtagagacatggggactgagaag
gtggaaggagcaactgagattgaacatcaagctattgtcctccatgagctggttgggctt
tatctggaagggatggacacccatcgaaaacaggccaatcagaatctttccctggggttt
tctgaattggaaccaagagaagattgcctctctccctctgatggcagcagcccctgcatg
ccggattcaggggctttctga

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_2|76_aa
MAVMVSQNLRETAQECMLLATQRNNIFPRRTGHSAPHRPGPRAEEEDTPRHLSEDNWTRK
QEPAGRTPSLRTGMNE

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_2|231_bp
atggcggttatggtgtcacagaatctgcgagaaacagcacaagaatgcatgctgctggca
acgcagaggaataatatcttcccaagacgaaccggacattctgctcctcaccgtccagga
cccagagctgaagaggaggacacacctagacacctttctgaggacaactggacacggaag
caggagccggcaggcaggaccccctctctgaggacaggaatgaatgaatga

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_3|134_aa
MVSAAQASPEQLNAQQQAGHSLAPPEKGKLESAIETSVFPNQKQASLPLRKRQGLRNLKV
SLVCNGPSWWAFREAGRVSVSPDSVAAPDSEPGAHYQSNPPGFIDDTPGGSAAPIAPGAE
QGKPVDCAKAWPRN

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_3|405_bp
atggtctcagcagcgcaggcctctccagagcagctgaatgcacagcagcaggcaggacac
agtttggcccccccagaaaaagggaagctagagtctgccattgaaacctcagtgtttccc
aatcagaaacaagcaagcttgcctcttagaaagagacagggactaaggaacttgaaagtc
agcctcgtttgcaatggaccaagctggtgggctttcagagaagctggacgtgtctctgtt
tccccggattcagttgcagcgccagattcagaaccaggagcccattaccagtcaaatcct
ccaggcttcattgatgataccccaggaggttctgcagctccaattgcccctggcgctgag
caggggaagccagtggactgtgctaaggcttggccccggaattag

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_4|534_aa
MQDLSSQTGRDPFLRKMLRQPRRPFPGSRAASLAFHRRRLSQYCNIGEKQTMVNPGSSSQ
PPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSG
MILCRNDYISPLVGGAFNAAGTAAEEWSNLLARRQLHPSAPSSFGNSVSLPRTVFPPPPP
RARRLARKVQREEEVRRPADRLLIFTCRYKCIYLSATLSETYLSLPKSSLENTARLFGNS
GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPTA
LINGHLNSLQSNPLLPDQKPLTCRGIVIKAQNPRIAIERWHLGHFGKITCTDDVLYPVRN
LLTTAVFANAFDISLKRITSHVRGEPSSLMKALGKAFLFCAHGTLFLKVAIWRVTIWKRP
SLSSALFTIAKTWNQPKCPSMVDWIKKMWYMYTVEFYAAIKRNEIMSFAGIWMKLEAIIL
SKLMQEQKTKHRMFSHVCQVCPNEGRFLKTEIECSIPCVHPKLPCSVVYVPRTP

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_4|1605_bp
atgcaggacttatcttcccaaacaggaagagacccatttctgagaaagatgctccgccag
cccaggcgccccttccctggaagccgagcggcttcgctcgcatttcaccgccgccgcctc
tcgcaatattgcaatataggggaaaagcagaccatggtgaatccgggcagcagctcgcag
ccgcccccggtgacggccggctccctctcctggaagcggtgcgcaggctgcgggggcaag
attgcggaccgctttctgctctatgccatggacagctattggcacagccggtgcctcaag
tgctcctgctgccaggcgcagctgggcgacatcggcacgtcctgttacaccaaaagtggc
atgatcctttgcagaaatgactacattagtccacttgttggaggagctttcaatgccgca
gggaccgctgcagaagagtggagtaatctgctcgcccgccgccagctccacccaagcgcc
ccaagtagcttcggaaactccgtttctcttcctcgaaccgtctttcctccacccccacct
cgggcccgaagactggcgcggaaagtgcagcgagaggaggaagttcggagaccggcggat
aggttgctgatatttacttgcaggtacaaatgtatatacctttcagccacactctcagaa
acgtacctctccttgcccaaaagcagtttagaaaacacagccaggttatttggaaatagc
ggtgcttgcagcgcttgcggacagtcgattcctgcgagtgaactcgtcatgagggcgcaa
ggcaatgtgtatcatcttaagtgttttacatgctctacctgccggaatcgcctggtcccg
ggagatcggtttcactacatcaatggcagtttattttgtgaacatgatagacctacagct
ctcatcaatggccatttgaattcacttcagagcaatccactactgccagaccagaagcct
ctaacatgtcggggtattgttattaaggcccagaatcccagaattgctatcgaacgctgg
catttggggcattttggtaaaattacctgcactgatgatgtgctttatcctgttaggaat
ttactaacaacagctgtatttgccaatgcatttgatatatcattaaagagaatcacttcc
catgtacgtggagaaccaagtagtctcatgaaggctttgggaaaagcctttttgttctgt
gctcatggaaccttatttttaaaagtcgctatctggcgtgtgactatctggaaaaggccg
tcactgtcatcagcactattcacaattgcaaagacatggaaccaacccaaatgcccgtca
atggtagactggataaagaaaatgtggtacatgtatactgtggaattctatgcagccata
aaaaggaatgagatcatgtcctttgcaggaatatggatgaagctggaagccattatcctc
agcaaactaatgcaggaacagaaaaccaaacaccgcatgttctcacatgtatgtcaggtc
tgcccaaatgagggtcggtttctcaagacagaaattgaatgctctataccttgtgttcac
cccaaactgccttgtagtgttgtgtatgtgccccgcaccccctga

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_5|190_aa
MDIYAKIINKILANRIQQHINKLIRHDQVGFIPGMQGWFNIHKSINVIHHINRTNDKNHM
IISIDAEKALDKIKHPIMLKTLNKLGIDGTYLKIIRAIYDKPIANIILNGQKLEAFPLKT
DTRQGCPLSPLPFNIVLEVLARAIRQEKEIKGIQIGREEVKLSLFADDMIVYLENSAQNL
LKLVSNFSKV

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_5|573_bp
atggacatctatgcgaagatcatcaataaaatattggcaaaccgaatccagcagcacatt
aacaagcttatccgccacgatcaagtcggcttcatccctgggatgcaaggctggttcaac
atacacaaatcaataaatgtaatccatcacataaacagaaccaatgacaaaaaccacatg
attatctcaatagatgcagaaaaggccttggataaaattaaacaccccatcatgctaaaa
actctcaataaactaggtattgatggaacatatctcaaaataataagagccatttatgac
aaacccatagccaatatcatactgaatgggcaaaagctggaagcattccctttgaaaact
gacacaagacaaggatgccctctctcaccactcccattcaacatagtattggaagttctg
gccagggcaatcaggcaagaaaaagaaataaagggcattcaaataggaagagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatttagaaaactcagcccaaaatctc
cttaagctggtaagcaacttcagcaaagtctga

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_6|85_aa
MALGSKCKRTHCSSTKRYTCLGGDAVREYGELGNGHAELCSTTSRAMERIFLQQLKGMIK
RQHKSYGSCPSIMLSEDNDDEGNDE

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_6|258_bp
atggcccttggaagcaagtgcaagagaacacactgctcaagtacaaaacgatacacctgc
ctaggtggagatgctgttagggagtacggtgagcttggcaatgggcatgctgaactctgc
tccaccacaagcagagccatggagaggatttttctgcagcagttgaaaggaatgattaag
aggcagcataagtcatatggatcctgtcctagcattatgctttctgaagataatgatgat
gaaggaaatgatgaatga

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_7|52_aa
MNLNAACRGIDLLSTLKFDEFKEQNEYMMQRLTQCEDDEDEDLYDDLLPLNE

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_7|159_bp
atgaatctgaatgctgcatgcagagggatagatttactgtcaacccttaaattcgatgag
tttaaagagcaaaatgagtatatgatgcagagactgactcaatgtgaagatgatgaggat
gaagacctttatgatgatctacttccacttaatgaatag

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_8|83_aa
MEAGLSIGYLFSVPLEHMETIILLQYTLNTDNMPDDGTRMAGHNPGVYSGNLQENCSEMP
QCEAEHECRVLTIAAFDELSLYP

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_8|252_bp
atggaggctgggctatccatagggtatttgttctctgtaccactagaacacatggagacc
atcatcctcctgcaatatacactgaacactgacaacatgccagatgacggaaccaggatg
gcaggacacaatccaggggtatatagcggtaacctccaagaaaactgctcagaaatgccc
cagtgtgaggctgagcatgagtgcagagtgctcacaattgctgcatttgatgagttaagt
ttatacccctga

>gi568815597f:87232016_87440204|GENSCAN_predicted_peptide_9|122_aa
MVCPEFVPSDVQMCPKFLPSGEFMVSQTSGMKPQTLAVSATAHKGSVDPKRFWLQGLHLD
LGKVEEHSENWTAESDELASYPNTLCLWAFLSRYLMYYWRSKCNKAKMSSFSVKARPQLQ
CD

>gi568815597f:87232016_87440204|GENSCAN_predicted_CDS_9|369_bp
atggtgtgtccagagtttgttccttcagatgttcagatgtgtccaaagtttcttccttct
ggtgagttcatggtctcacagacttcaggaatgaagccgcagacccttgcagtgagtgct
acagctcataaaggtagtgtggacccaaagagattctggctccaaggactccatttggac
ttaggaaaagtagaagagcactctgaaaactggacagcggaaagtgatgaactggcatcg
taccccaacacactctgcttgtgggccttcctctccagatacctgatgtattactggaga
agcaaatgcaacaaggcaaagatgtcttcattttctgtcaaagcacggcctcaactacag
tgtgattga