GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:50:25

Sequence gi568815597r:21119958_21390157 : 270200 bp : 48.50% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +      2     41   40                              -2.76
 1.01 Init +   9449   9457    9  1  0   78  111     0 0.857   1.98
 1.02 Intr +   9720   9780   61  2  1   68   53    60 0.020  -1.19
 1.03 Intr +  29857  29926   70  2  1    5  115    79 0.049   0.54
 1.04 Term +  30188  30314  127  2  1  115   38    85 0.930   3.96
 1.05 PlyA +  31021  31026    6                               1.05

 2.24 PlyA -  33411  33406    6                               1.05
 2.23 Term -  56563  56008  556  0  1  139   48   371 0.258  32.00
 2.22 Intr -  57301  57137  165  0  0   50   61    77 0.051   0.28
 2.21 Intr - 100174 100002  173  1  2   93   95   202 0.983  20.14
 2.20 Intr - 101885 101790   96  2  0  115  109   111 0.999  16.11
 2.19 Intr - 105483 105293  191  1  2  118   80   427 0.998  44.20
 2.18 Intr - 107269 107202   68  0  2  107  102    81 0.999   9.95
 2.17 Intr - 108084 107974  111  2  0  116   32   159 0.992  12.59
 2.16 Intr - 113704 113601  104  1  2  105   70    93 0.984   8.17
 2.15 Intr - 115970 115893   78  2  0  108   86   130 0.999  14.55
 2.14 Intr - 116887 116789   99  1  0   90  100   163 0.999  18.01
 2.13 Intr - 118287 118177  111  0  0   83   92   125 0.954  12.98
 2.12 Intr - 124527 124370  158  1  2   89   99    53 0.637   6.23
 2.11 Intr - 125146 124935  212  0  2  127   47   302 0.652  28.56
 2.10 Intr - 127406 127264  143  2  2  128   95   250 0.999  28.85
 2.09 Intr - 136181 135990  192  2  0   70   93   414 0.955  39.79
 2.08 Intr - 137633 137568   66  2  0   89  121    62 0.989   8.70
 2.07 Intr - 138882 138736  147  0  0  142   99   232 0.999  30.13
 2.06 Intr - 140435 140314  122  0  2   73   96   104 0.993   9.91
 2.05 Intr - 152954 152742  213  0  0  102  111   185 0.833  20.89
 2.04 Intr - 159375 159234  142  0  1  142   58   207 0.985  23.03
 2.03 Intr - 162814 162746   69  1  0  154  100   -71 0.091   0.08
 2.02 Intr - 170199 170113   87  0  0   54   96   281 0.577  25.67
 2.01 Init - 170457 170407   51  0  0   72   60   166 0.577  11.40
 2.00 Prom - 174330 174291   40                              -9.16

 3.00 Prom + 175440 175479   40                              -4.86
 3.01 Init + 180161 180328  168  1  0   92   94   136 0.533  12.17
 3.02 Intr + 187301 187358   58  1  1  109   77    -4 0.013  -0.94
 3.03 Intr + 200283 200403  121  1  1   58   80    74 0.426   3.15
 3.04 Intr + 206162 206276  115  2  1   95   77    -9 0.204  -0.85
 3.05 Intr + 207754 207837   84  0  0  105   83     9 0.512   2.12
 3.06 Term + 214354 214515  162  0  0   85   47   139 0.926   7.44
 3.07 PlyA + 217807 217812    6                               1.05

 4.00 Prom + 219309 219348   40                              -5.36
 4.01 Init + 224215 224375  161  0  2   91   84    48 0.668   2.00
 4.02 Term + 224954 225659  706  2  1   36   54   243 0.390   8.69
 4.03 PlyA + 228403 228408    6                               1.05

 5.03 PlyA - 229345 229340    6                               1.05
 5.02 Term - 256162 256037  126  1  0  107   39    60 0.724   1.28
 5.01 Init - 257186 256998  189  2  0   62   82    84 0.482   4.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:21119958_21390157|GENSCAN_predicted_peptide_1|88_aa
MHLDISKIYRCQDEEVTTPHPNSICSPTKLEITIILDMYLSSTDTDRNHSSQVLYYARPC
CSSSHFWLSPAAVPDESQDGKDKMAKDF

>gi568815597r:21119958_21390157|GENSCAN_predicted_CDS_1|267_bp
atgcacttggacatttccaaaatctaccgttgccaggatgaagaagtaacaaccccccac
cccaattccatatgttcacccaccaagctagaaatcaccatcattctggacatgtatctg
tcatcaactgacacagacaggaaccacagcagccaagtcctatactatgcccgcccctgc
tgcagcagcagccatttttggctcagccctgctgcagtcccagatgaaagccaggacggc
aaggacaagatggcaaaggacttttaa

>gi568815597r:21119958_21390157|GENSCAN_predicted_peptide_2|1117_aa
MRGVWPPPVSALLSALGMSTYKRATLDEEDLVDSLSEGDAYPNGLQMALLLALSCLLVAH
TMTFPCTFKVNFHSPRSGQRCWAARTQVEKRLVVLVVLLAAGLVACLAALGIQYQTRSPS
VCLSEACVSVTSSILSSMDPTVDPCHDFFSYACGGWIKANPVPDGHSRWGTFSNLWEHNQ
AIIKHLLENSTASVSEAERKAQVYYRACMNETRIEELRAKPLMELIERLGGWNITGPWAK
DNFQDTLQVVTAHYRTSPFFSVYVSADSKNSNSNVIQVDQSGLGLPSRDYYLNKTENEKV
LTGYLNYMVQLGKLLGGGDEEAIRPQMQQILDFETALANITIPQEKRRDEELIYHKVTAA
ELQTLAPAINWLPFLNTIFYPVEINESEPIVVYDKEYLEQISTLINTTDRCLLNNYMIWN
LVRKTSSFLDQRFQDADEKFMEVMYGTKKVSLLLRMPEYGLSAYFMPRCLWEHRKGPQPA
GGEPTPSGKFHSHFHLLPKEVAVTLSLMQPTNGYSLNSCHRVPGSKPSTGILRQTCLPRW
KFCVSDTENNLGFALGPMFVKATFAEDSKSIATEIILEIKKAFEESLSTLKWMDEETRKS
AKEKADAIYNMIGYPNFIMDPKELDKVFNDYTAVPDLYFENAMRFFNFSWRVTADQLRKA
PNRDQWSMTPPMVNAYYSPTKNEIVFPAGILQAPFYTRSSPKALNFGGIGVVVGHELTHA
FDDQGREYDKDGNLRPWWKNSSVEAFKRQTECMVEQYSNYSVNGEPVNGRHTLGENIADN
GGLKAAYRAYQNWVKKNGAEHSLPTLGLTNNQLFFLGFAQVWCSVRTPESSHEGLITDPH
SPSRFRVIGSLSNSKEFSEHFRCPPGSPMNPPHKCEVWGFSPRRCLSAPASGAQRTADSG
AITIVLRGWAAGEDSRKPDLAFGLSLRPAPAPLLPPAPRSRRLPGSAPIPPPRCPRPLHP
GAPGPALGGLVASLCHEFTAETGSEIRHSDCSRNRTRHRSGGGGGSSGTASSPGGGSSGG
GGGGGGGGGSGPPSSPEHQGPPDSGAPTVSFSPSCRPFGSRRRSPGGPRSPGDPPAGRHS
PARKGTAAQAPASGLGGAFGVPRQQHCGGTPRPSAIL

>gi568815597r:21119958_21390157|GENSCAN_predicted_CDS_2|3354_bp
atgcggggcgtgtggccgcccccggtgtccgccctgctgtcggcgctggggatgtcgacg
tacaagcgggccacgctggacgaggaggacctggtggactcgctctccgagggcgacgca
taccccaacggcctgcagatggctttgctccttgctcttagctgtctccttgtcgcccac
accatgacatttccctgtacatttaaggtgaacttccacagcccccggagtggccagagg
tgctgggctgcacggacccaggtggagaagcggctggtggtgttggtggtacttctggcg
gcaggactggtggcctgcttggcagcactgggcatccagtaccagacaagatccccctct
gtgtgcctgagcgaagcttgtgtctcagtgaccagctccatcttgagctccatggacccc
acagtggacccctgccatgacttcttcagctacgcctgtgggggctggatcaaggccaac
ccagtccctgatggccactcacgctgggggaccttcagcaacctctgggaacacaaccaa
gcaatcatcaagcacctcctcgaaaactccacggccagcgtgagcgaggcagagagaaag
gcgcaagtatactaccgtgcgtgcatgaacgagaccaggatcgaggagctcagggccaaa
cctctaatggagttgattgagaggctcgggggctggaacatcacaggtccctgggccaag
gacaacttccaggacaccctgcaggtggtcaccgcccactaccgcacctcacccttcttc
tctgtctatgtcagtgccgattccaagaactccaacagcaacgtgatccaggtggaccag
tctggcctgggcttgccctcgagagactattacctgaacaaaactgaaaacgagaaggtg
ctgaccggatatctgaactacatggtccagctggggaagctgctgggcggcggggacgag
gaggccatccggccccagatgcagcagatcttggactttgagacggcactggccaacatc
accatcccacaggagaagcgccgtgatgaggagctcatctaccacaaagtgacggcagcc
gagctgcagaccttggcacccgccatcaactggttgccttttctcaacaccatcttctac
cccgtggagatcaatgaatccgagcctattgtggtctatgacaaggaataccttgagcag
atctccactctcatcaacaccaccgacagatgcctgctcaacaactacatgatctggaac
ctggtgcggaaaacaagctccttccttgaccagcgctttcaggacgccgatgagaagttc
atggaagtcatgtacgggaccaagaaggtgagcctgctactgcgtatgcctgaatatggg
ctgagcgcctactttatgccaaggtgtctatgggagcacaggaagggacctcagccagct
gggggggaacctacccccagtggaaagttccacagccacttccaccttctccccaaggaa
gtggctgtcaccctctcactcatgcagccgactaatggttactcattgaactcctgccat
cgcgtgccaggctctaagcccagtacgggaatactgagacagacctgtcttcctcgctgg
aagttttgcgtgagtgacacagaaaacaacctgggctttgcgttgggccccatgtttgtc
aaagcaaccttcgccgaggacagcaagagcatagccaccgagatcatcctggagattaag
aaggcatttgaggaaagcctgagcaccctgaagtggatggatgaggaaacccgaaaatca
gccaaggaaaaggccgatgccatctacaacatgataggataccccaacttcatcatggat
cccaaggagctggacaaagtgtttaatgactacactgcagttccagacctctactttgaa
aatgccatgcggtttttcaacttctcatggagggtcactgccgatcagctcaggaaagcc
cccaacagagatcagtggagcatgaccccgcccatggtgaacgcctactactcgcccacc
aagaatgagattgtgtttccggccgggatcctgcaggcaccattctacacacgctcctca
cccaaggccttaaactttggtggcataggtgtcgtcgtgggccatgagctgactcatgct
tttgatgatcaaggacgggagtatgacaaggacgggaacctccggccatggtggaagaac
tcatccgtggaggccttcaagcgtcagaccgagtgcatggtagagcagtacagcaactac
agcgtgaacggggagccggtgaacgggcggcacaccctgggggagaacatcgccgacaac
gggggtctcaaggcggcctatcgggcttaccagaactgggtgaagaagaacggggctgag
cactcgctccccaccctgggcctcaccaataaccagctcttcttcctgggctttgcacag
gtctggtgctccgtccgcacacctgagagctcccacgaaggcctcatcaccgatccccac
agcccctctcgcttccgggtcatcggctccctctccaattccaaggagttctcagaacac
ttccgctgcccacctggctcacccatgaacccgcctcacaagtgcgaagtctggggtttt
tcgcctcgccgctgcctctccgcccctgcgagcggggctcagcgaacagccgactccggg
gccattaccattgttcttcgaggctgggccgcaggggaggactctcgcaagccagacctc
gcctttggtctttccctccgccccgcacccgcgccgctgctccccccagccccccgctcc
cgccgcctccccgggtctgcccccatcccgcccccccgctgcccccggcccctgcacccc
ggcgcgcccggtcccgctctgggggggttggtggcttcgctttgccatgagtttaccgca
gaaaccggctctgaaatcaggcacagcgactgcagcaggaaccggacccggcaccggagc
ggcggcggcggcggcagcagcggtaccgcctcctcacccggcggcggcagcagcggcggc
ggcggcggcggcggcggcggcggcggcagcggtcccccctcctcacccgaacatcagggc
cctccagactcaggcgccccaacagtatccttttcaccttcctgtcggcccttcggttct
cgtcgtcgcagtccagggggaccccgcagcccaggggaccctcctgccggccgccacagc
ccagccaggaaagggacagcggctcaagcccctgcatcgggcttgggcggagcttttggg
gtgccccggcagcagcactgcggggggacccccagaccctctgcaatactgtga

>gi568815597r:21119958_21390157|GENSCAN_predicted_peptide_3|235_aa
MAWARMLLTHWRQHMGAVGHAGFPAAGLLAATIPAGQQYPQEAAEKQGEEHQAWSQRLWG
AGASISTSWVEDRSQGSSRQQLYGLKQVTGLLIYKMGMVTGPTPQRTATIKWDNESPHPS
AAPRSQPTIAASQTQLPHSTSSLSKNTHAGEGGELHSWGPQPPGPQTSTSPWPVRNRAAQ
QEPPHRKPNRMPSNHPLNTQGRRKMKCRFLMAIFHQTSPGNKEPQSHRIPSSVAV

>gi568815597r:21119958_21390157|GENSCAN_predicted_CDS_3|708_bp
atggcatgggccaggatgctgctcacccactggaggcagcacatgggggctgtgggacac
gcagggttccctgctgctggcctgctggctgccaccattccagctggacaacagtatccc
caggaggcggctgagaagcagggagaagaacaccaggcttggagtcagcgactctggggg
gctggagctagcatctccacatcatgggtggaagatagatctcaaggctccagccgtcaa
cagctgtatgggctcaaacaggtcaccggacttctcatttataaaatggggatggtgaca
gggccaaccccacagaggactgctacgatcaaatgggataatgagagcccccatccttct
gccgccccacgttctcagccaacaatagctgcttcccagactcagctgccacacagcacg
agctccctgagcaaaaatacccatgcgggggagggtggggagctacacagctggggtccc
cagccccccgggcctcagaccagtaccagtccatggcctgttaggaaccgggccgcacag
caggagccaccacaccggaagcccaacaggatgccgagtaaccacccactgaacactcag
gggcgaaggaagatgaagtgccgctttctcatggccatcttccaccagaccagcccagga
aacaaggaaccacaaagccacaggattccctccagcgtggccgtgtga

>gi568815597r:21119958_21390157|GENSCAN_predicted_peptide_4|288_aa
MGGRVVRGLQLWAQQGLGTTVGLFGFTGGPILLPSRRPRAWQHHHREVEGLDHSAPRRAP
DRPQCPGTLRSSCIQAPRNRRHPRARPSPAALGLQAKLSPGTSEQPKTDRSNRPQSEPGT
PSPPHPAGTRTKLGAAAPDGTKRSAAGRAALCPGAPRLHAFREPGGGCCCSRRPAPREPG
RPRVPPAAPLPATVEAGLDRTRPPRAALTIARVLRPGFAQLPAPGSRFPAPGSLLPAQLL
GRLGCLAQAARSAPAGELAASAPSAGGAGPPRGQWQGAGAWVAQPITA

>gi568815597r:21119958_21390157|GENSCAN_predicted_CDS_4|867_bp
atgggggggcgggttgtaaggggactccagctctgggcacagcaggggctgggaaccact
gtgggactcttcggctttacagggggtcccatcctgctcccatccaggcgccctcgggct
tggcagcatcatcacagagaagtggaggggctggatcacagtgccccaaggcgagcccca
gaccgacctcagtgtcccgggacgctcaggtccagctgcatccaggcacctcgaaatcgc
cgccacccgcgagcccgacccagcccggctgccctgggtctccaagccaagctgagtcca
gggacttcagaacaacccaaaacagaccgcagcaaccgtccccaaagcgaaccggggacc
ccgagccccccacatccggctgggaccagaaccaagctcggcgcggccgcccccgacggg
accaagcgcagcgccgccgggagagccgcgctctgcccgggcgctccccgactccacgcc
ttccgagagccgggcgggggctgctgctgcagccggcgcccagccccccgcgagccaggg
cggccccgggtgccacccgcggcaccgctgcccgcgaccgtcgaggctgggctggaccgg
accagacctccgcgcgcagcactcaccatagctcgcgtgctccgccccggcttcgcgcag
ctccccgcgcccggctcccgattcccagctccgggttccctgctcccagcccagctgctc
ggacggctcggctgcctggcccaggcggcgcgctcagctccagcgggcgagctcgcggct
tcggcgccgagtgccggaggggcggggccgccgcggggccaatggcagggcgcgggggcc
tgggtggcgcagccaatcacggcctga

>gi568815597r:21119958_21390157|GENSCAN_predicted_peptide_5|104_aa
MAGEASESWREVKGTSYMVAARENEKDEKQKPLINPSDLMRLIHYHKNSMGETAPMIQMI
SHQAQHHVEATKVWGLHPQKPWAELYFGPLQQQLEWLGHKAPSP

>gi568815597r:21119958_21390157|GENSCAN_predicted_CDS_5|315_bp
atggctggggaggcctcagaatcatggcgggaggtgaagggcacttcttacatggtggca
gcaagagaaaatgagaaggatgaaaagcagaaacccctgataaacccatcggatctcatg
agacttattcactaccacaagaacagtatgggggaaactgcccccatgattcaaatgatc
tcccaccaggctcaacaccacgtggaagccaccaaggtttggggcttgcaccctcagaaa
ccatgggccgagctgtactttggcccccttcagcaacagctggagtggctgggacacaag
gcaccaagtccctag