GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:17:49

Sequence gi568815587f:68437665_68713114 : 275450 bp : 45.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    782   1018  237  0  0  109  110   373 0.999  39.19
 1.02 Intr +   2113   2252  140  2  2  102   93   174 0.999  19.48
 1.03 Intr +   2969   2983   15  1  0  100  113    11 0.384   0.54
 1.04 Intr +   6953   7106  154  1  1   32   29    87 0.432  -3.15
 1.05 Intr +   7909   8038  130  2  1  114   57    84 0.504   7.65
 1.06 Intr +   8081   8187  107  2  2  129    3    41 0.203  -0.44
 1.07 Intr +  10745  10832   88  0  1   40  108    68 0.430   3.03
 1.08 Term +  11145  11406  262  0  1  107   43   399 0.997  32.30
 1.09 PlyA +  11494  11499    6                               1.05

 2.07 PlyA -  15856  15851    6                               1.05
 2.06 Term -  23126  23058   69  2  0   36   44   138 0.155   2.14
 2.05 Intr -  33916  33793  124  0  1   98   15    86 0.120   2.89
 2.04 Intr -  35834  35746   89  2  2   50  116     4 0.169  -1.83
 2.03 Intr -  51070  50933  138  1  0   13   42   137 0.003   2.26
 2.02 Intr -  77785  77625  161  2  2   97   53    58 0.188   2.91
 2.01 Init -  89032  88930  103  1  1   81   78    76 0.354   6.30
 2.00 Prom -  91324  91285   40                              -5.96

 3.00 Prom +  91978  92017   40                              -5.56
 3.01 Init +  96425  96460   36  1  0  102  113    14 0.549   5.33
 3.02 Intr +  99995 100227  233  1  2   51   71   127 0.165   3.87
 3.03 Intr + 105650 105734   85  2  1   50   62    50 0.304  -1.58
 3.04 Intr + 105816 105924  109  2  1  114   89     7 0.265   3.26
 3.05 Intr + 105983 106088  106  0  1   92   47    28 0.251  -1.63
 3.06 Intr + 107174 107360  187  2  1  101   99   -20 0.249   0.09
 3.07 Intr + 110403 110540  138  2  0  100   82    32 0.925   4.46
 3.08 Intr + 113457 113522   66  2  0   77   95    77 0.972   6.40
 3.09 Intr + 116481 116593  113  2  2   78   53    44 0.582  -0.92
 3.10 Intr + 120902 121015  114  2  0   85   85    26 0.638   1.56
 3.11 Intr + 122059 122304  246  1  0  103   64   216 0.338  17.27
 3.12 Intr + 126639 126768  130  0  1   84   97     7 0.391   1.90
 3.13 Intr + 129350 129502  153  1  0   80   77    55 0.662   3.87
 3.14 Intr + 132084 132233  150  2  0   82   77    27 0.493   1.36
 3.15 Intr + 133376 133440   65  1  2   92   98     7 0.434  -0.38
 3.16 Intr + 136445 136560  116  2  2   75  115    50 0.675   6.49
 3.17 Intr + 142115 142179   65  0  2   77   89    21 0.376  -0.46
 3.18 Intr + 145379 145465   87  1  0   51   89    45 0.506   1.07
 3.19 Intr + 150263 150360   98  1  2   32   89   163 0.536   9.61
 3.20 Intr + 152996 153050   55  2  1   93   84    55 0.990   4.58
 3.21 Intr + 153912 154042  131  2  2   73   67   102 0.996   6.09
 3.22 Intr + 158433 158554  122  0  2   84  111   146 0.877  16.64
 3.23 Intr + 162677 162830  154  0  1   74   83    54 0.847   2.63
 3.24 Intr + 164199 164305  107  0  2   66  100    63 0.772   5.16
 3.25 Intr + 165678 165828  151  1  1   99   86   191 0.598  19.22
 3.26 Term + 171589 171706  118  1  1   96   54    21 0.055  -2.49
 3.27 PlyA + 173135 173140    6                               1.05

 4.00 Prom + 181513 181552   40                              -5.36
 4.01 Init + 185626 185683   58  0  1   42  107    36 0.821   2.37
 4.02 Intr + 187222 187355  134  2  2  115   80   106 0.951  12.86
 4.03 Term + 198311 198517  207  1  0   58   48   132 0.598   3.54
 4.04 PlyA + 200928 200933    6                               1.05

 5.00 Prom + 201642 201681   40                              -5.56
 5.01 Init + 202502 202555   54  1  0   63   63    52 0.310   1.48
 5.02 Intr + 203548 203670  123  0  0   96   60    18 0.097   0.58
 5.03 Term + 212244 212771  528  2  0   87   44   295 0.080  19.25
 5.04 PlyA + 213176 213181    6                               1.05

 6.00 Prom + 222884 222923   40                              -4.76
 6.01 Init + 230342 230537  196  1  1   90   77   154 0.978  13.66
 6.02 Intr + 236506 236621  116  2  2   56   46    95 0.311   2.27
 6.03 Intr + 238292 238320   29  1  2  133   92     1 0.381   1.91
 6.04 Term + 240029 240134  106  2  1   69   55    74 0.395   0.08
 6.05 PlyA + 240532 240537    6                               1.05

 7.00 Prom + 240815 240854   40                              -1.16
 7.01 Init + 247260 247340   81  2  0   56  131   195 0.880  19.57
 7.02 Intr + 247930 247984   55  0  1  114  113    84 0.998  12.05
 7.03 Intr + 250350 250436   87  1  0   45   94   149 0.427  11.14
 7.04 Intr + 251185 251262   78  2  0   99   95    40 0.975   5.32
 7.05 Intr + 254645 254726   82  0  1  126   56    26 0.156   1.90
 7.06 Intr + 255999 256032   34  0  1  106  100    17 0.051   2.93
 7.07 Term + 271698 271841  144  2  0  126   43   119 0.805   9.11
 7.08 PlyA + 271969 271974    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:68437665_68713114|GENSCAN_predicted_peptide_1|377_aa
XITKPPSDDSPAHSSAIGPVIGIILSLFVMGGVYFVCQRVVCQRYAGANGPFPHEYVSGT
PHVPLNFIAPGGSQHGPFTGIACGKSMMSSVSLMGGRGGVPLYDRNHVTGASSSSSSSTK
ATLYPPLYAPKGLAVVHGTSETLPRRCTGGSCQKSAQCRFGQNLKLPWDVGEKPGLVKFM
GRGARIWLYAFQDGLGDPHKPYTLWEAACWVGVPSVALVEGADLCGAGCVLPGPGGHVHV
VNLSIYYPRFGAGASTGPCEGGRISCILHFRNGYYFIPTFINEKLKLEEVKPYIIRGMAP
PTTPCSTDVCDSDYSASRWKASKYYLDLNSDSDPYPPPPTPHSQYLSAEDSCPPSPATER
SYFHLFPPPPSPCTDSS

>gi568815587f:68437665_68713114|GENSCAN_predicted_CDS_1|1134_bp
naaatcaccaagccgccctcagacgacagcccggcccacagcagtgccatcgggcccgtc
attggcatcatcctctctctcttcgtcatgggtggtgtctattttgtgtgccagcgcgtg
gtgtgccagcgctatgcgggggccaacgggcccttcccgcacgagtatgtcagcgggacc
ccgcacgtgcccctcaatttcatagccccgggcggttcccagcatggccccttcacaggc
atcgcatgcggaaagtccatgatgagctccgtgagcctgatggggggccggggcggggtg
cccctctacgaccggaaccacgtcacaggggcctcgtccagcagctcgtccagcacgaag
gccacgctgtacccgccgctgtatgcccctaagggcctggccgtggttcacgggacatct
gagacattgccgaggcgctgcactggtggatcttgccagaagtctgcccagtgcagattt
gggcagaatctcaaactgccttgggatgtaggagagaaaccaggcctggtcaagttcatg
ggaagaggggctcggatctggctgtatgctttccaggatggccttggagacccacataag
ccctacaccctttgggaagctgcatgttgggttggggtgccgtcagtggcacttgtggaa
ggtgcagacctgtgtggggctggttgtgtgctgcctggacctggggggcacgttcacgtg
gtgaatttgtctatttactatccccgctttggggctggtgccagcacaggcccttgtgaa
gggggcagaatctcatgtatccttcactttcgaaatgggtactatttcatccccactttt
atcaatgagaaactaaagctcgaagaggtcaagccctacatcattcgaggaatggcgccc
ccgacgacgccctgcagcaccgacgtgtgtgacagcgactacagcgccagccgctggaag
gccagcaagtactacctggatttgaactcggactcagacccctatccacccccacccacg
ccccacagccagtacctgtcggcggaggacagctgcccgccctcgcccgccaccgagagg
agctacttccatctcttcccgccccctccgtccccctgcacggactcatcctga

>gi568815587f:68437665_68713114|GENSCAN_predicted_peptide_2|227_aa
MVVEFLPVVFLRDEGNRGEARNTQLVPDARVHAGGLLPPYRLTPPAPGSLSQPSPVVLCC
VCLVETLRMFWMELPSPRQAGPVPGLNKAIMINQDTPYNYPVPLLHDENMPDVSSHHQDP
PGALGPKLGVAEKISGLQNLGKQVYQFIINNITKDTDGEIRMARLFLHHHVGTALKIVDE
FHAARAMRRVLVLISGDLTAAALAEAGNALTDTISEAPKMADVSSRP

>gi568815587f:68437665_68713114|GENSCAN_predicted_CDS_2|684_bp
atggtagtcgagtttttgccagttgtcttcttaagagatgaaggaaaccgaggagaggca
aggaacacccagctggttccagatgcacgtgtgcatgctggaggattgctgcccccctac
cgcctcacccctccagctcctggttctttgtcccagccatctcctgtggtactgtgctgt
gtctgccttgtggagaccctgaggatgttctggatggagttaccaagcccccgacaggct
ggtccagttcctggcctcaacaaagccatcatgatcaatcaggacacaccctacaactac
ccagtgccccttctacatgatgagaacatgcctgatgtgtccagccaccatcaggacccc
ccaggtgctctagggcccaagcttggagtggctgagaaaattagtggcttacagaactta
gggaaacaagtttaccagtttatcataaacaatattacaaaggatacagatggagagata
cgcatggcaaggcttttcctgcaccaccatgtgggaacagctctcaagatcgtcgatgaa
ttccacgctgccagagccatgagacgagtcttggtccttatctcaggtgacctcacggca
gcagcactggcagaggcgggaaacgcgctcaccgacaccatcagcgaagcgcccaaaatg
gcggacgtatcaagcaggccttga

>gi568815587f:68437665_68713114|GENSCAN_predicted_peptide_3|1044_aa
MEETLSCGHTYTTSMFWKFDLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIE
FLLKAECLEDLVSFIIEEPPQDMDEKIRYKGLYSGILKPMLRKLREETLLPKDPYICQAS
HQSLSSAVAFWFVTSGLFVPGSCCRQHLLALDAPATFGYFAISLSCSAFELATPDDLLGR
WVLAVQQGGVYPNISCELLTSDVSQMNDRLGEDESLLMKLYSFLLNDSPLNPLLASFFSK
VLSILISRKPEQIVDFLKKKHDFVDLIIKHIGTSAIMDLLLRLLTCIEPPQPRQDVLNWL
NEEKIIQRLVEIVHPSQEEDRHSNASQSLCEIVRLSRDQMLQIQNSTEPDPLLATLEKQE
IIEQLLSNIFHKEKNESAIVSAIQILLTLLETRRPTKISTIFLPQGYSALFPPQGYSTLF
PPQRYSTLFPPQRYGALFPPQRYGALFPPQRYGALFPPQRYGALFSPQRYGALFPPQRFE
GHIEICPPGMSHSACSVNKSVLEAIRGRLGSFHELLLEPPKKSVMKTTWGVLDPPVGNTR
LNVIRLISSLLQTNTSSINGDLMELNSIGVILNMFFKYTWNNFLHTQVEICIALILASPF
ENTENATITDQDSTGDNLLLKHLFQKCQLIERILEAWEMNEKKQAEGGRRHGYMGHLTRI
ANCIVHSTDKGPNSALVQQLIKDTQILITMLQLPQYSVQYCAVQVTTCHIHSSSDDEIDF
KETGFSQDSSLQQAFSDYQMQQMTSNFIDQFGFNDEKFADQDDIGNVSFDRVSDINFTLN
TNESGNIALFEACCKERIQQFDDGGSDEEDIWEEKHIAFTPESQRRSSSGSTDSEESTDS
EEEDGAKQDLFEPSSANTEDKMEVDLSEPPNWSANFDVPMETTHGAPLDSVGSDVWSTEE
PMPTKETGWASFSEFTSSLSTKDSLRSNSPVEMETSTEPMDPLTPSAAALAVQPEAAGSV
AMEASSDGEEDAESTDKVTETVMNGGMKETLSLTVDAKTETAVFKRISSWPPLLPLAFVL
LTHCSRATRGAVKSDAVNTVTSCD

>gi568815587f:68437665_68713114|GENSCAN_predicted_CDS_3|3135_bp
atggaggaaactctgtcatgtggccacacctacacgaccagcatgttttggaaatttgat
cttcactcatcatcccacatagacacacttctagaaagagaagatgtaacactgaaggag
ttaatggatgaggaagatgttttacaggaatgtaaagctcagaaccgcaaacttatagag
tttctgttaaaagcagaatgtctcgaagatttagtctcattcattatagaagaaccacct
caagacatggatgaaaagatcagatacaagggtttatattctggcatcttgaagcccatg
ctacgtaaattgagggaggagactttacttcccaaagacccatacatctgccaggcctca
caccagagcctgtcaagtgccgtggctttctggttcgtcaccagtggtctttttgtgcca
gggtcttgctgcaggcagcacttgcttgccttggatgccccagccacgtttggctatttt
gccatctctctgtcttgctcagcttttgagcttgccactcctgatgacttgttggggcgc
tgggtcctggctgtccagcagggaggagtgtatccaaatatatcttgtgagttgctcact
tctgatgtctcccagatgaatgatagactgggagaagatgaatccttgctaatgaaatta
tatagcttcctcctaaacgattcccctttgaatccactacttgccagtttcttcagcaag
gtgctaagtattcttatcagcagaaaaccagaacagattgtggatttcttaaagaagaag
catgattttgtagaccttattataaagcacataggaacttctgctatcatggatttgttg
ctcaggctcctgacgtgtatcgaacctccacagcccaggcaagatgtgctgaattggtta
aatgaggagaaaattatccagaggcttgtggaaatagttcatccatcgcaagaagaagat
cgacattcaaatgcatcacaatcactttgtgaaattgttcgcctgagcagagaccagatg
ttacaaattcagaacagtacagagcccgaccccctgcttgccactctagaaaagcaagaa
attatagagcagcttctatcaaatattttccacaaggagaaaaatgagtcagccatagtc
agtgcaatccagatattgctgactttacttgagacacgacgaccaacgaaaatcagtacc
atcttcctaccccagggatacagtgccctcttcccaccccaggggtacagtaccctcttc
ccaccccagcggtacagtaccctcttcccaccccagcggtacggtgccctcttcccaccc
cagcggtacggtgccctcttcccaccccagcggtacggtgccctcttcccaccccagcgg
tacggtgccctcttctcaccccagcggtacggtgccctcttcccaccccagcgatttgaa
ggccatatagagatctgcccaccaggcatgagccattcagcttgttcagtaaacaagagt
gttctagaagccatcagaggaagacttggatcttttcatgaactcctgctggagccaccc
aagaaaagtgtgatgaagaccacatggggtgtgctggatcctcctgtggggaatacccgg
ttgaatgtcattaggttgatatccagcctgcttcaaaccaataccagcagtataaatggg
gaccttatggagctgaatagcattggagtcatattgaacatgttcttcaagtatacatgg
aataactttttgcatacacaagtggaaatttgtattgcactgattcttgcaagtcctttt
gaaaacacagaaaatgccacaattaccgatcaagactccactggtgataatttgttatta
aaacatcttttccaaaaatgtcaattaatagaacgaatacttgaagcctgggaaatgaat
gagaagaaacaggctgagggaggaagacggcatggttacatgggacacctaacgaggata
gctaactgtatcgtgcacagcactgacaagggccccaacagtgcattagtgcagcagctt
atcaaagatacacaaatacttatcaccatgctccagttgcctcagtattcagtgcagtac
tgtgctgtgcaggttacaacctgccatattcattcatccagtgatgatgaaattgacttt
aaagaaacgggtttctcacaggattcttctttgcagcaagccttttctgattatcagatg
caacaaatgacgtccaattttattgaccagtttggcttcaacgatgagaagtttgcagat
caagatgacattggcaatgtttcttttgatcgagtatcagacatcaactttactctcaat
acaaatgaaagtggaaatattgccttgtttgaagcatgttgtaaggaaagaatacaacag
tttgatgatggtggctctgatgaggaagatatatgggaggaaaagcacatcgcattcaca
ccagaatcccaaagacgatccagctcggggagtacagacagtgaggaaagtacagactct
gaagaagaagatggagcaaagcaagacttgtttgaacccagcagtgccaacacggaggat
aaaatggaggtggacctgagtgaaccacccaactggtcagctaactttgatgtcccaatg
gaaacaacccacggtgctccattggattctgtgggatctgatgtctggagcacagaggag
ccgatgccaactaaagagacgggctgggcttctttttcagagttcacgtcttccctgagc
acaaaagattctttaaggagtaattctccagtggaaatggaaaccagcactgaacccatg
gaccctctgactcccagtgcggctgccctggcagtgcagccagaagcggcaggcagtgtg
gccatggaagccagctctgacggagaggaggatgcagaaagtacagacaaggtaactgag
acagtgatgaatggcggcatgaaggaaacgctcagcctcactgtagatgccaagacagag
actgcggtcttcaaaaggatcagctcttggccccctcttctccctctggcgtttgtgctt
ctcacacattgttcgagggcaactcgaggagccgtgaaatccgatgcagtcaacacggtg
acctcatgtgactga

>gi568815587f:68437665_68713114|GENSCAN_predicted_peptide_4|132_aa
MTSGPQTNQPKKHLTNFKSDERERDFLKSNLTLITAGFTSQASRKALEQFPERIPNGTTR
QIPQELATSARNLATRPRNAYSPEFLLSCIPSVRDPTGNRTVQLTWQPLPELLEVWPKAD
CFPDLLGLAAED

>gi568815587f:68437665_68713114|GENSCAN_predicted_CDS_4|399_bp
atgacctcaggtcctcagaccaaccagcccaagaaacatctcaccaatttcaaatctgat
gaacgggaaagagattttctcaagtccaatctcacgctgataaccgctggcttcacgagc
caggcctccaggaaggcattagagcagtttcctgagaggatccccaatggaactaccagg
caaattccccaggagcttgctacaagtgccagaaatctggccaccaggccaaggaatgcc
tacagcccagaattcctcctaagctgcatcccatctgtgcgggaccccactggaaatcgg
actgttcaactcacctggcagccactcccagagctcctggaagtctggcccaaggctgac
tgcttcccagatcttcttggcttagcggctgaagactga

>gi568815587f:68437665_68713114|GENSCAN_predicted_peptide_5|234_aa
MDSRDPENSGSGTLNDGLSWLCKVSGSGSKGGVCLPEDRTTSCSFHQGTAGSFWPSQQAR
GQFHSHRTLQASCPRLCPGRCFLPGPWSAPRTPPQIPATAALFGVSDGELSFLCPRSLQG
SAPATVAPLSRLLCWMLGFSPGPSGALEPSSAPRPGPVMGHFRALDGGPAPWRRISHPWQ
TPAIRILPFLPAPLFLRVAQKQGWSFRWLLLHTRPWGHRGPGDIMVPASMELTL

>gi568815587f:68437665_68713114|GENSCAN_predicted_CDS_5|705_bp
atggactcaagagacccggagaacagcggaagtgggactcttaatgatggtctttcttgg
ctctgcaaggttagcggttctggttccaaaggaggtgtttgcttgccagaggacagaact
acaagctgtagcttccaccagggtactgcaggctccttttggcccagccagcaagcccga
ggacagtttcactcccaccggaccctccaagcctcttgcccacggctgtgtcctggccgc
tgcttcctgcctgggccctggagtgctccgaggacccctccccaaatcccagccaccgcc
gccctgtttggcgtctctgatggagagctgagcttcctgtgtcctcggagcctgcaggga
tcagcacccgccacggtagctcccctttcccgcctgctctgctggatgctgggtttcagt
ccaggtccttcgggcgccctggaaccctcttccgctccccgacctgggcctgtcatgggc
cactttagggccctggatggcggccctgctccctggcgccgcatcagccatccgtggcag
actcccgccatccggattctccctttcctgccggcacctctcttcttgcgagtggcccag
aagcaggggtggtcgttccgctggctcctgctgcacaccaggccctggggacatcgtggc
cctggggacatcatggtccctgcctccatggagctgacgctctag

>gi568815587f:68437665_68713114|GENSCAN_predicted_peptide_6|148_aa
MIPKLPRRRNTCLGITLNGTTCYPPSPPCTPHPPAVPSRPLGHRGLGFRKKTADESPVMD
PIVPHVFSLPGDAAPLGGQLLGTGLPFGQLARQLCSRKWRALAMRGIGELGWVGLSYPEN
PQLDESPRAQVDSRTPGCDPASDQQGGP

>gi568815587f:68437665_68713114|GENSCAN_predicted_CDS_6|447_bp
atgatccccaaactacctcgccggcgcaacacgtgcctgggcatcacgctgaacggcacg
acctgctaccctccttccccgccctgcaccccccaccccccagccgtgccatcaaggcct
ctgggccaccgaggacttggattcagaaagaaaacagcagatgaaagtcctgtaatggac
cccattgtgccccatgtgttcagtctccctggtgatgcagccccactcggtggccagctg
ctgggcacggggctgccgttcggacagcttgcaagacagctgtgctcccggaaatggagg
gccctggcgatgaggggcattggggagttgggttgggttgggctgagctacccagaaaac
ccccagctggatgagtcacccagggcacaggtggattcacggactcccggctgtgaccct
gcctctgaccagcaaggaggtccctga

>gi568815587f:68437665_68713114|GENSCAN_predicted_peptide_7|186_aa
MARGSALLLASLLLAAALSASAGLWSPAKEKRGWTLNSAGYLLGPHAVGNHRSFSDKNGL
TSKRELRPEDDMKPGSFDRSIPENNIMRTIIEFLSFLHLKGSTLTLGGLGSPALQTTPSP
EVVTSSTWYKRSVAGGSQKAHVQPEKAKVLRTRLSNLGVLLSGQPSPSMPLGAVKEVLED
KLNRIT

>gi568815587f:68437665_68713114|GENSCAN_predicted_CDS_7|561_bp
atggcccgaggcagcgccctcctgctcgcctccctcctcctcgccgcggccctttctgcc
tctgcggggctctggtcgccggccaaggaaaaacgaggctggaccctgaacagcgcgggc
tacctgctgggcccacatgccgttggcaaccacaggtcattcagcgacaagaatggcctc
accagcaagcgggagctgcggcccgaagatgacatgaaaccaggaagctttgacaggtcc
atacctgaaaacaatatcatgcgcacaatcattgagtttctgtctttcttgcatctcaaa
ggctccacgctcacgcttggtggccttgggtcgccggcgcttcagaccactcccagcccg
gaggtagtgacgtcatccacctggtataaacggagtgtggcaggtggcagccagaaggcc
cacgtgcagccagagaaggccaaggttctgaggactcgcctgtcaaaccttggggtcctg
ctgtcaggacagccttccccatcaatgccgcttggagctgtgaaagaggttctggaagac
aagttgaaccgcatcacatag