Result of FASTA (ccds) for pF1KA1525
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1525, 1132 aa
  1>>>pF1KA1525 1132 - 1132 aa - 1132 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.2138+/-0.00112; mu= 0.8125+/- 0.067
 mean_var=260.5802+/-55.958, 0's: 0 Z-trim(111.9): 25  B-trim: 1602 in 3/50
 Lambda= 0.079452
 statistics sampled from 12745 (12760) to 12745 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.392), width:  16
 Scan time:  5.740

The best scores are:                                      opt bits E(32554)
CCDS32146.1 BTBD7 gene_id:55727|Hs108|chr14        (1132) 7577 882.7       0
CCDS73684.1 BTBD7 gene_id:55727|Hs108|chr14        ( 781) 5031 590.7 4.3e-168
CCDS32147.1 BTBD7 gene_id:55727|Hs108|chr14        ( 410) 2548 305.9 1.2e-82


>>CCDS32146.1 BTBD7 gene_id:55727|Hs108|chr14             (1132 aa)
 initn: 7577 init1: 7577 opt: 7577  Z-score: 4706.1  bits: 882.7 E(32554):    0
Smith-Waterman score: 7577; 100.0% identity (100.0% similar) in 1132 aa overlap (1-1132:1-1132)

               10        20        30        40        50        60
pF1KA1 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 KPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 QALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 DREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDAMKRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDAMKRG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 LISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRL
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 RMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 LQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGD
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 ESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGW
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 KQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAA
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 AAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTELSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTELSQS
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 VSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPSTPAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPSTPAL
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 SRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHRQ
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 KNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLSACSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLSACSS
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130  
pF1KA1 EAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
             1090      1100      1110      1120      1130  

>>CCDS73684.1 BTBD7 gene_id:55727|Hs108|chr14             (781 aa)
 initn: 5031 init1: 5031 opt: 5031  Z-score: 3131.3  bits: 590.7 E(32554): 4.3e-168
Smith-Waterman score: 5031; 99.9% identity (100.0% similar) in 746 aa overlap (387-1132:36-781)

        360       370       380       390       400       410      
pF1KA1 LVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSK
                                     .:::::::::::::::::::::::::::::
CCDS73 GAGADGGAGGGGGGGDGSGPSGSSSGGRSLRGCEDIIAESISLDTLIAILKWSSHPYGSK
          10        20        30        40        50        60     

        420       430       440       450       460       470      
pF1KA1 WVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 WVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLM
          70        80        90       100       110       120     

        480       490       500       510       520       530      
pF1KA1 KRIADREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KRIADREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDA
         130       140       150       160       170       180     

        540       550       560       570       580       590      
pF1KA1 MKRGLISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MKRGLISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTD
         190       200       210       220       230       240     

        600       610       620       630       640       650      
pF1KA1 LVRLRMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LVRLRMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKD
         250       260       270       280       290       300     

        660       670       680       690       700       710      
pF1KA1 MVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDE
         310       320       330       340       350       360     

        720       730       740       750       760       770      
pF1KA1 RFGDESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RFGDESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQL
         370       380       390       400       410       420     

        780       790       800       810       820       830      
pF1KA1 KAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQ
         430       440       450       460       470       480     

        840       850       860       870       880       890      
pF1KA1 TVAAAAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TVAAAAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTE
         490       500       510       520       530       540     

        900       910       920       930       940       950      
pF1KA1 LSQSVSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LSQSVSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPS
         550       560       570       580       590       600     

        960       970       980       990      1000      1010      
pF1KA1 TPALSRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TPALSRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGH
         610       620       630       640       650       660     

       1020      1030      1040      1050      1060      1070      
pF1KA1 LHRQKNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LHRQKNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLS
         670       680       690       700       710       720     

       1080      1090      1100      1110      1120      1130  
pF1KA1 ACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
         730       740       750       760       770       780 

>>CCDS32147.1 BTBD7 gene_id:55727|Hs108|chr14             (410 aa)
 initn: 2547 init1: 2547 opt: 2548  Z-score: 1597.2  bits: 305.9 E(32554): 1.2e-82
Smith-Waterman score: 2548; 98.7% identity (99.0% similar) in 393 aa overlap (1-393:1-393)

               10        20        30        40        50        60
pF1KA1 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 KPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHR
       :::::::::::::::::::::::::::    .:                           
CCDS32 KPNMTRAEEAMELYHIALFLEFNMLAQEETTVIRPACAAELSNSCLLPQS          
              370       380       390       400       410          

              430       440       450       460       470       480
pF1KA1 QALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIA




1132 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 11:15:42 2016 done: Thu Nov  3 11:15:42 2016
 Total Scan time:  5.740 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
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