GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:04:48

Sequence gi568815594r:185062801_185291196 : 228396 bp : 41.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    448    534   87  2  0  115   75   110 0.854  11.42
 1.02 Term +   8768   8883  116  0  2  114   33   111 0.628   5.95
 1.03 PlyA +   9396   9401    6                               1.05

 2.08 PlyA -  10416  10411    6                               1.05
 2.07 Term -  18381  18248  134  1  2   85   41    50 0.175  -2.73
 2.06 Intr -  23392  23302   91  1  1   72   55   109 0.428   4.65
 2.05 Intr -  31293  31183  111  0  0   76   26    88 0.042   1.06
 2.04 Intr -  48779  48610  170  0  2   61   23   151 0.040   4.64
 2.03 Intr -  57992  57884  109  2  1   53   82    53 0.032   0.14
 2.02 Intr -  64338  64193  146  1  2   -1   92   128 0.285   3.38
 2.01 Init -  64454  64379   76  2  1   96   89    45 0.303   6.72
 2.00 Prom -  64496  64457   40                              -6.95

 3.03 PlyA -  64512  64507    6                              -0.45
 3.02 Term -  65190  64803  388  2  1   63   35   199 0.611   5.53
 3.01 Init -  65926  65868   59  1  2   66   80   120 0.967   7.83
 3.00 Prom -  73587  73548   40                              -7.25

 4.00 Prom +  78237  78276   40                              -6.95
 4.01 Init +  80573  80683  111  1  0  103   94   103 0.995  10.79
 4.02 Intr +  81964  82450  487  0  1  114   76   485 0.920  41.56
 4.03 Intr +  82959  83099  141  1  0   83   86   162 0.997  14.90
 4.04 Term +  84014  84171  158  0  2   66   35   122 0.813   1.81
 4.05 PlyA +  84452  84457    6                               1.05

 5.05 PlyA -  84487  84482    6                               1.05
 5.04 Term - 100125  99998  128  1  2   82   41   120 0.681   4.16
 5.03 Intr - 101379 101229  151  0  1   31   71    99 0.429   1.31
 5.02 Intr - 113251 112986  266  2  2   94  111   156 0.869  14.81
 5.01 Init - 128396 127343 1054  2  1  103   86   733 0.985  69.00
 5.00 Prom - 129642 129603   40                             -11.04

 6.00 Prom + 132875 132914   40                              -4.15
 6.01 Init + 147027 147455  429  2  0   78   98   307 0.265  25.00
 6.02 Intr + 147741 147861  121  2  1   16   52   167 0.227   5.05
 6.03 Intr + 155728 155770   43  2  1   71   84    24 0.024  -3.32
 6.04 Intr + 164221 164397  177  1  0   85   49   149 0.298   8.81
 6.05 Intr + 171452 171522   71  2  2   75   25   104 0.093   0.71
 6.06 Intr + 177018 177058   41  1  2   81   82    35 0.394  -0.78
 6.07 Intr + 179505 179595   91  2  1   54   84   122 0.923   7.05
 6.08 Intr + 179670 179772  103  1  1   44   89   133 0.346   7.31
 6.09 Intr + 196061 196264  204  2  0   27   93   146 0.047   6.39
 6.10 Intr + 197013 197104   92  0  2   73   18   118 0.788   2.02
 6.11 Intr + 197937 198033   97  1  1   49   74   114 0.845   4.25
 6.12 Intr + 201638 201810  173  2  2   60   69    71 0.873   1.06
 6.13 Intr + 204169 204355  187  2  1   88   63   204 0.896  15.73
 6.14 Intr + 206707 206750   44  1  2   24   89    36 0.345  -5.73
 6.15 Term + 209325 209515  191  1  2   52   37   182 0.331   6.13
 6.16 PlyA + 210443 210448    6                               1.05

 7.00 Prom + 224459 224498   40                              -3.45
 7.01 Init + 224609 224756  148  1  1   71   86    90 0.065   7.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:185062801_185291196|GENSCAN_predicted_peptide_1|67_aa
XLPQEYEGQSSSSCWSHDVTLKAGNSALEELIREDREVSVGGSKEPPSLQLRLRGLRRFI
HKATLHK

>gi568815594r:185062801_185291196|GENSCAN_predicted_CDS_1|204_bp
ngcctgccacaagaatacgaaggccagagctccagcagctgttggagccacgatgtgacc
ctgaaggcaggaaactcagctttggaagaactgatccgagaggacagggaagtcagtgtg
ggcggctctaaggagcctccctctctacagctgcggctcagaggattacggcgcttcatc
cacaaggcaacattgcacaagtag

>gi568815594r:185062801_185291196|GENSCAN_predicted_peptide_2|278_aa
MDAARGHVLSQLAPGTENQILHVLTYGNNEHLGAKSGKRGRGPTAEKRPIGYHVHYLVNG
FNKSPNLSIMRYTQANHLHGAPWLLQAIYAPLSQGCEAGRSLKKGSAGRTGSLVTLLLMF
RLIDMGSRVAEGSGTHVKEPTRRKMFRLTDMGSRALCYPGPGTASAYVWGTGPKTALEFS
YSLEGLTELTESCDTHSYGLLQGKLPADLHAQTGAVHRLQQEKGLLACGNHLLQHSRDTM
VNRQMMKSSPGDDWCLVPSCTKPVFMEFTREVETKDRQ

>gi568815594r:185062801_185291196|GENSCAN_predicted_CDS_2|837_bp
atggatgcagctagaggccatgtcctaagccaattagcaccaggaacagaaaaccagatc
ctgcatgttctcacttatgggaacaatgagcacttgggcgccaaaagtggcaagcggggg
agggggccaacagctgaaaaacgacctatcgggtaccatgttcactatttggttaatggg
ttcaataaaagcccaaacctcagcatcatgcgatatacccaggccaatcatctccatggg
gccccgtggctgctacaagccatttacgccccgctgagtcagggctgtgaagctgggaga
tctctgaagaagggttcagctggcaggacaggctctctagtgactctcctactgatgttc
agactcattgacatgggttccagggtagcagagggctctggaacccatgtcaaggagcct
acccgcaggaagatgttcaggctcactgacatgggttccagagccctctgctatcctggt
cctggcaccgcctcagcatatgtttgggggaccggtcccaaaaccgcccttgagttcagt
tattcactagagggactcacagagctcactgagagctgtgatactcacagttatggttta
ttacagggaaagctccctgcagacttgcatgctcagacgggagctgtccaccgcctgcaa
caggaaaagggcttgcttgcgtgtggtaaccaccttcttcaacattctagggatacaatg
gtgaacaggcaaatgatgaagtcaagtcctggagatgactggtgtttagtccctagttgc
actaaacctgttttcatggagtttacacgagaagtggagacaaaagacagacaataa

>gi568815594r:185062801_185291196|GENSCAN_predicted_peptide_3|148_aa
MRGVRRGPGAEGQAGLATPSTHPGHRTPVLSRGSSKPWFSPDREFRSVRAPFRPPAPSVP
PQGPEAALGAQRIPRRLEPQPRRFVAAVQETAGEGARGAETACRGLCSPGASFGLAEPDS
QPALTTAQRLARWVSEPPTLKDTDLART

>gi568815594r:185062801_185291196|GENSCAN_predicted_CDS_3|447_bp
atgcgcggggtgcgtcggggtcccggcgccgagggccaggcggggctggcgacacccagc
acacatcccggacacagaacgcccgtactttcccgagggtcttccaagccctggttcagc
ccggaccgtgagttccggagcgtccgcgcccccttccgccctcccgcaccctcagtcccg
cctcagggccccgaagccgccctgggcgcgcagcgcatccccaggcgactggagccccag
ccccgacgcttcgtcgccgcagtccaggagaccgcaggagaaggggctcgtggggcggag
acagcctgccggggcctctgcagcccgggagcctcctttggactcgccgaacccgactcc
caacccgcccttaccactgcccagaggctcgcgcgctgggtttctgagcctcccaccctg
aaggacaccgatctcgcccggacataa

>gi568815594r:185062801_185291196|GENSCAN_predicted_peptide_4|298_aa
MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR
IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASG
GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVS
VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMM
QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV

>gi568815594r:185062801_185291196|GENSCAN_predicted_CDS_4|897_bp
atgggtgatcacgcttggagcttcctaaaggacttcctggccgggggcgtcgccgctgcc
gtctccaagaccgcggtcgcccccatcgagagggtcaaactgctgctgcaggtccagcat
gccagcaaacagatcagtgctgagaagcagtacaaagggatcattgattgtgtggtgaga
atccctaaggagcagggcttcctctccttctggaggggtaacctggccaacgtgatccgt
tacttccccacccaagctctcaacttcgccttcaaggacaagtacaagcagctcttctta
gggggtgtggatcggcataagcagttctggcgctactttgctggtaacctggcgtccggt
ggggccgctggggccacctccctttgctttgtctacccgctggactttgctaggaccagg
ttggctgctgatgtgggcaagggcgccgcccagcgtgagttccatggtctgggcgactgt
atcatcaagatcttcaagtctgatggcctgagggggctctaccagggtttcaacgtctct
gtccaaggcatcattatctatagagctgcctacttcggagtctatgatactgccaagggg
atgctgcctgaccccaagaacgtgcacatttttgtgagctggatgattgcccagagtgtg
acggcagtcgcagggctggtgtcctacccctttgacactgttcgtcgtagaatgatgatg
cagtccggccggaaaggggccgatattatgtacacggggacagttgactgctggaggaag
attgcaaaagacgaaggagccaaggccttcttcaaaggtgcctggtccaatgtgctgaga
ggcatgggcggtgcttttgtattggtgttgtatgatgagatcaaaaaatatgtctaa

>gi568815594r:185062801_185291196|GENSCAN_predicted_peptide_5|532_aa
MDQFGDILEGEVDHSFFDSDFEEGKKCETNSVFDKQNDDPKERIDKDTKNVNSNTGMQTT
ENYLTEKGNERNVKFPPEHPVENDVTQTVSSFSLPASSRSKKLCDVTTGLKIHVSIPNRI
PKIVKEGEDDYYTDGEESSDDGKKYHVKSKSAKPSTNVKKSIRKKYCKVSSSSSSSLSSS
SSGSGTDCLDAGSDSHLSDSSPSSKSSKKHVSGITLLSPKHKYKSGIKSTETQPSSTTPK
CGHYPEESEDTVTDVSPLSTPDISPLQSFELGIANDQKVKIKKQENVSQEIYEDVEDLKN
NSKYLKAAKKGKEKHEPDVSSKSSSVLDSSLDHRHKQKVLHDTMDLNHLLKAFLQLDKKG
PQKHHFDQPSVAPGKNYSFTREEVRQIDRENQRLLKELSRQAEKPGSKSTIPRSADHPPK
LYHSALNRQKEQQRIERENLALLKRLEAVKPTVGMKRSEQLMDYHRNMGYLNSSPLSRRA
RSTLGQYSPLRASRTSSATSGLSCRSERSAVDPSSGHPRRRPKPPNVRTAWL

>gi568815594r:185062801_185291196|GENSCAN_predicted_CDS_5|1599_bp
atggatcagtttggagatatattagaaggtgaagtggaccattctttctttgacagtgac
tttgaagaaggaaagaaatgtgaaactaactcagtttttgacaagcaaaatgatgaccca
aaggaaagaatagataaagatacaaaaaatgtaaattcgaacactggaatgcaaacaaca
gaaaattatcttactgagaagggaaatgaaagaaacgtgaaatttcccccagaacacccc
gtagagaatgatgttacacaaactgtaagttctttctcattgccagcctcttcaagatca
aaaaaattgtgtgatgttacaacaggacttaaaatacacgtgtccattccaaatagaatt
cccaaaattgtaaaagaaggtgaagatgattactacacagatggagaggaaagcagtgat
gatgggaagaaataccatgtgaagtccaagtccgctaaaccatctactaacgttaaaaaa
agcataaggaaaaagtattgcaaagttagctcctcttcctcctcctctttatcttcctca
tcttcaggttcaggtacagattgtttagatgcagggtctgatagccatctatctgattcg
tctccgtcatctaagtcatctaagaaacatgtatctggtataaccctcctgtcaccaaaa
cacaagtataaatcaggaataaaatcgacagaaacacagccttcaagtactacaccaaaa
tgtggccactaccctgaggagtctgaagatactgtgactgacgtaagtcccttatcaact
ccagacattagccctcttcagtcttttgaactgggcatagcaaatgatcaaaaagtgaaa
attaaaaagcaagaaaatgtgagccaagaaatatatgaagatgttgaggatttgaaaaat
aattcaaaatatttgaaagcagccaaaaaagggaaagaaaaacatgagcctgatgtctcc
tcaaagtcgtcttcagtgttagactccagtttagaccacagacataaacagaaagtctta
catgacacaatggatctgaatcatctcttgaaagcttttctgcaattagataaaaaagga
ccacaaaaacatcactttgatcagccttcagtagcacccgggaaaaactactctttcaca
agagaagaggtgagacagatcgatcgggaaaatcagaggcttttgaaagaactgtcaaga
caggcggaaaagccgggaagcaaaagtacaattcctagatcggctgatcatcccccaaag
ttatatcacagtgctctcaacagacagaaggaacaacaaaggattgagagagaaaacttg
gctttattgaaaaggcttgaggccgtgaaaccaacagttggtatgaaacgttcagaacaa
ctgatggactatcatcgcaatatgggctatctcaactcatcaccattgtcaagacgggcc
agatccactcttggccaatatagcccattaagagcttccaggacatccagtgctacgagt
ggtctcagttgtaggagtgagcgatcagcggttgacccctccagtggccaccctcgaaga
agacctaaaccccctaatgtccgtacagcttggttataa

>gi568815594r:185062801_185291196|GENSCAN_predicted_peptide_6|687_aa
MHPDATDSGGAGPSPARAAGAGGRPVSGFRGERRPESPGDAEAAAAAAPGAPGGRSWWKP
VAVAALAAVALSFLGPGSGEAAGAAGLSSVLFRLSLYLSCAAAAFLLGILFALVCRSPRA
QPPDFAAAWSRLAATSAARRPPGGVPRPSVSLAVGGEEGNHSVRYVQALRTVLAIRLVLL
AVLASQHSAATLGTCQSCPVSRKSLRAVDQVTVSVLGTTATQDDTQKKKVPFWSKENVLR
NASGSVPLTSYWPGLGRKQVIHQETLRKEPAMKVKYDGMREGDLAGSQDNSGGKHRLPGD
SVRAHRLSEAQSPRALNPPPPTSVFNLLEQLTELRETLTYIYWFIVEDIAKDADEEMLRY
RDYILSWYGNLSRDEGQLYHLLLEDFWEIARQLHHRLSHVDVVKVVCNDVVRTLLTHFCD
LKAANAREEIKYLDGVPLLPCDAVRVGDLAAECGCTAVLTSQMPYKDLGDTQESLDHPLK
TAAYRESNFQHEEQPRPFVLHACLRNSDDEVRFLQTCSRVLVFCLLPSKDVQSLSLRIML
AEILTTKVLKPVVELLSNPDYINQMLLAQLAYREQMNEHHKRAYTYAPSYEDFIKLINSN
SDVEFLKQLSRSTVKAGVDYLVTPRAVTDSANSTRAKNVNATLVPDIKGQLDGFPTVGVG
GEGCHNQGRQTRAQNEGASVSETHNCH

>gi568815594r:185062801_185291196|GENSCAN_predicted_CDS_6|2064_bp
atgcaccccgatgcgaccgacagtggcggcgccggccccagccccgcgcgggccgcaggc
gccggcggccgtcctgtctcgggcttcaggggcgagcggcggccggagtccccgggggac
gcggaggcagcagcagcggcggcgccgggggccccgggcggccggagctggtggaagccc
gtggcggtggccgcactcgccgccgtggccctctccttcctggggcccggcagcggggag
gcggcgggggccgcggggctgagctccgtcctgttcaggctcagcctgtacctgagctgc
gcggcggccgccttcctgctggggatcctgtttgccctcgtctgccggagcccgcgcgcc
cagccgcccgacttcgccgccgcctggagccggctggccgcgacctcagccgcccgccgc
ccgccggggggtgtccccagaccttcggtgtcgcttgccgtgggaggggaagaagggaat
cacagcgttcgctacgtgcaggctctgcgcacggtcctggcgatccgcttggttcttctg
gccgttctcgctagccagcactcagcagccactctaggcacttgccagtcctgccccgtg
agtcggaagagcttgcgggctgttgaccaggtgactgtatcagttttaggcaccacagcc
acgcaggatgatacccagaagaagaaagtccctttttggagcaaggaaaatgtgctcaga
aatgcttctggcagtgttcccctcacatcttactggccaggtttgggcagaaagcaggtt
attcaccaggaaacattacgaaaggaacctgctatgaaagtaaaatatgacggcatgaga
gagggggatttggcagggtcacaggacaatagtggagggaagcatcgtctacctggagac
agtgtcagagcccatagattaagtgaagctcagtccccaagagccctcaaccccccaccc
ccaacgtcagtctttaatttgctggagcagctcacagaactcagggaaacgcttacttac
atttactggtttattgtagaagatattgcaaaggatgcagatgaagaaatgctacgttat
agagattacattctgtcctggtatggaaacctcagcagagatgagggacaactttaccat
ctgctcttggaagacttttgggaaattgccagacagctgcaccacagactgagtcacgtg
gatgtggttaaagttgtctgcaatgatgttgtgaggactttactcactcatttctgtgac
ctgaaagctgccaatgccagggaagagataaagtatttagatggtgtcccccttctgccc
tgtgatgctgttcgtgtaggggaccttgctgctgaatgcggctgcacagcagttttaaca
tcccagatgccctacaaggatcttggggacacccaggagtctctggaccaccctttgaaa
actgctgcctatagagaaagtaacttccaacatgaagaacagccaagaccttttgtgttg
cacgcatgcttgaggaactcagatgatgaagtaagatttctacaaacgtgttctcgggtt
ctggtgttttgtctcctcccctcaaaggatgtgcagtctctcagcttacgtataatgctt
gcagaaattctcacaacaaaagtcttgaagccggtagtggagttactgagtaatccagat
tacattaaccaaatgctgcttgcccagctggcgtacagagagcaaatgaatgagcatcac
aagagagcctacacctatgccccctcttacgaggacttcatcaagctcattaacagcaac
tctgatgtggagttcttgaagcaactaagtcgttccacagtaaaggcaggtgtggactat
ttggtaaccccaagagcagtgactgactctgctaatagcacaagagccaaaaatgtgaat
gccaccttggttccggatattaaagggcagctggatgggtttcccacagttggtgtaggt
ggtgagggatgccacaatcaaggaaggcaaaccagagctcagaatgaaggtgcatctgtt
agtgaaactcacaattgccattaa

>gi568815594r:185062801_185291196|GENSCAN_predicted_peptide_7|50_aa
MRRCTQAGQWGCRGEGSSENYLRRHHPVELSTVKKMFYLAPPGVVHKPTX

>gi568815594r:185062801_185291196|GENSCAN_predicted_CDS_7|150_bp
atgaggcgctgcactcaggcagggcagtggggctgcaggggagagggcagttctgagaac
tatttaagacggcaccatccagtagaactttctacagtgaagaaaatgttctacttggca
ccgcccggtgtggtccacaagcccacagnn