Result of FASTA (ccds) for pF1KSDF0201
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDF0201, 703 aa
  1>>>pF1KSDF0201 703 - 703 aa - 703 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.8706+/-0.00135; mu= -2.8796+/- 0.082
 mean_var=691.8839+/-145.956, 0's: 0 Z-trim(115.6): 207  B-trim: 414 in 1/51
 Lambda= 0.048759
 statistics sampled from 16008 (16209) to 16008 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.498), width:  16
 Scan time:  5.020

The best scores are:                                      opt bits E(32554)
CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1           ( 703) 5227 383.2 7.2e-106
CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1         ( 638) 4789 352.3 1.3e-96
CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3          ( 744) 2644 201.5 3.7e-51
CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6         ( 680) 2503 191.5 3.4e-48
CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX         (1685) 1599 128.5   8e-29
CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX         (1691) 1599 128.5 8.1e-29
CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9          (1838) 1588 127.8 1.4e-28
CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9         (1838) 1588 127.8 1.4e-28
CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1          (1690) 1531 123.7 2.2e-27
CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1        (1767) 1531 123.7 2.3e-27
CCDS778.1 COL11A1 gene_id:1301|Hs108|chr1          (1806) 1531 123.8 2.3e-27
CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2         (1499) 1525 123.2 2.8e-27
CCDS8759.1 COL2A1 gene_id:1280|Hs108|chr12         (1418) 1519 122.8 3.6e-27
CCDS41778.1 COL2A1 gene_id:1280|Hs108|chr12        (1487) 1519 122.8 3.7e-27
CCDS6376.1 COL22A1 gene_id:169044|Hs108|chr8       (1626) 1503 121.7 8.5e-27
CCDS12222.1 COL5A3 gene_id:50509|Hs108|chr19       (1745) 1476 119.9 3.3e-26
CCDS9511.1 COL4A1 gene_id:1282|Hs108|chr13         (1669) 1472 119.6 3.9e-26
CCDS41907.1 COL4A2 gene_id:1284|Hs108|chr13        (1712) 1455 118.4 9.1e-26
CCDS47447.1 COL9A1 gene_id:1297|Hs108|chr6         ( 678) 1436 116.5 1.3e-25
CCDS450.1 COL9A2 gene_id:1298|Hs108|chr1           ( 689) 1434 116.3 1.5e-25
CCDS4971.1 COL9A1 gene_id:1297|Hs108|chr6          ( 921) 1436 116.7 1.6e-25
CCDS42829.1 COL4A3 gene_id:1285|Hs108|chr2         (1670) 1426 116.3 3.7e-25
CCDS6802.1 COL27A1 gene_id:85301|Hs108|chr9        (1860) 1410 115.3 8.6e-25
CCDS76010.1 COL4A6 gene_id:1288|Hs108|chrX         (1707) 1393 114.0 1.9e-24
CCDS41297.1 COL16A1 gene_id:1307|Hs108|chr1        (1604) 1364 111.9 7.4e-24
CCDS4970.1 COL19A1 gene_id:1310|Hs108|chr6         (1142) 1352 110.9 1.1e-23
CCDS41353.1 COL24A1 gene_id:255631|Hs108|chr1      (1714) 1344 110.6   2e-23
CCDS2773.1 COL7A1 gene_id:1294|Hs108|chr3          (2944) 1349 111.2 2.2e-23
CCDS42828.1 COL4A4 gene_id:1286|Hs108|chr2         (1690) 1342 110.4 2.2e-23
CCDS76649.1 COL4A1 gene_id:1282|Hs108|chr13        ( 519) 1327 108.6 2.3e-23
CCDS44424.2 COL13A1 gene_id:1305|Hs108|chr10       ( 695) 1330 109.0 2.4e-23
CCDS44425.2 COL13A1 gene_id:1305|Hs108|chr10       ( 686) 1307 107.4 7.3e-23
CCDS13505.1 COL9A3 gene_id:1299|Hs108|chr20        ( 684) 1283 105.7 2.3e-22
CCDS44419.1 COL13A1 gene_id:1305|Hs108|chr10       ( 717) 1269 104.8 4.8e-22
CCDS76008.1 COL4A6 gene_id:1288|Hs108|chrX         (1633) 1261 104.7 1.1e-21
CCDS76009.1 COL4A6 gene_id:1288|Hs108|chrX         (1666) 1261 104.7 1.1e-21
CCDS14542.1 COL4A6 gene_id:1288|Hs108|chrX         (1690) 1261 104.7 1.2e-21
CCDS14541.1 COL4A6 gene_id:1288|Hs108|chrX         (1691) 1261 104.7 1.2e-21
CCDS58922.1 COL25A1 gene_id:84570|Hs108|chr4       ( 645) 1217 101.0 5.7e-21
CCDS44427.2 COL13A1 gene_id:1305|Hs108|chr10       ( 645) 1209 100.5 8.4e-21
CCDS44428.2 COL13A1 gene_id:1305|Hs108|chr10       ( 610) 1175 98.1 4.3e-20
CCDS44423.2 COL13A1 gene_id:1305|Hs108|chr10       ( 668) 1169 97.7   6e-20
CCDS55025.1 COL21A1 gene_id:81578|Hs108|chr6       ( 957) 1065 90.6 1.2e-17
CCDS83099.1 COL21A1 gene_id:81578|Hs108|chr6       ( 954) 1053 89.7 2.1e-17
CCDS34682.1 COL1A2 gene_id:1278|Hs108|chr7         (1366) 1024 87.9 1.1e-16
CCDS42971.1 COL18A1 gene_id:80781|Hs108|chr21      (1339) 1004 86.5 2.8e-16
CCDS42972.1 COL18A1 gene_id:80781|Hs108|chr21      (1519) 1004 86.6   3e-16
CCDS77643.1 COL18A1 gene_id:80781|Hs108|chr21      (1754) 1004 86.7 3.3e-16
CCDS43553.1 COL28A1 gene_id:340267|Hs108|chr7      (1125)  997 85.9 3.6e-16
CCDS43452.1 COL11A2 gene_id:1302|Hs108|chr6        (1650)  959 83.5 2.8e-15


>>CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1                (703 aa)
 initn: 5227 init1: 5227 opt: 5227  Z-score: 2014.1  bits: 383.2 E(32554): 7.2e-106
Smith-Waterman score: 5227; 100.0% identity (100.0% similar) in 703 aa overlap (1-703:1-703)

               10        20        30        40        50        60
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD GQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD RMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 RMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD LDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 LDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD GLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD IAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KSD GHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 GHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQAS
              610       620       630       640       650       660

              670       680       690       700   
pF1KSD GGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
       :::::::::::::::::::::::::::::::::::::::::::
CCDS40 GGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
              670       680       690       700   

>>CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1              (638 aa)
 initn: 4789 init1: 4789 opt: 4789  Z-score: 1848.0  bits: 352.3 E(32554): 1.3e-96
Smith-Waterman score: 4789; 100.0% identity (100.0% similar) in 638 aa overlap (66-703:1-638)

          40        50        60        70        80        90     
pF1KSD AGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPG
                                     ::::::::::::::::::::::::::::::
CCDS72                               MPLPLLPMDLKGEPGPPGKPGPRGPPGPPG
                                             10        20        30

         100       110       120       130       140       150     
pF1KSD FPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 FPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
               40        50        60        70        80        90

         160       170       180       190       200       210     
pF1KSD GPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGL
              100       110       120       130       140       150

         220       230       240       250       260       270     
pF1KSD PGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPP
              160       170       180       190       200       210

         280       290       300       310       320       330     
pF1KSD GVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
              220       230       240       250       260       270

         340       350       360       370       380       390     
pF1KSD LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGD
              280       290       300       310       320       330

         400       410       420       430       440       450     
pF1KSD QGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 QGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ
              340       350       360       370       380       390

         460       470       480       490       500       510     
pF1KSD PGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSP
              400       410       420       430       440       450

         520       530       540       550       560       570     
pF1KSD GITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATP
              460       470       480       490       500       510

         580       590       600       610       620       630     
pF1KSD AFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 AFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWV
              520       530       540       550       560       570

         640       650       660       670       680       690     
pF1KSD ALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSF
              580       590       600       610       620       630

         700   
pF1KSD SGFLLCPT
       ::::::::
CCDS72 SGFLLCPT
               

>>CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3               (744 aa)
 initn: 5240 init1: 2003 opt: 2644  Z-score: 1031.9  bits: 201.5 E(32554): 3.7e-51
Smith-Waterman score: 2644; 57.2% identity (71.1% similar) in 671 aa overlap (42-702:88-743)

              20        30        40        50         60        70
pF1KSD LLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGP-VGPPFREGKGQYLEMPLPL
                                     .:.. .: .: .:      ::.  :.::  
CCDS29 VPHMPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGK--EIPLA-
        60        70        80        90       100         110     

               80        90       100       110       120       130
pF1KSD LPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGL
          .:.:: :: :.:::::::::::.::.   : ::..:.::: : ::   .:: : ::.
CCDS29 ---SLRGEQGPRGEPGPRGPPGPPGLPGH---GIPGIKGKPGPQGYPG---VGKPGMPGM
             120       130       140          150          160     

              140       150       160       170       180       190
pF1KSD PGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEP
       ::: :  :.:: .:: : .:. :  : ::: : ::: :.   ::::. :.:: :: .:. 
CCDS29 PGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDR
         170       180       190       200       210       220     

              200       210       220       230       240       250
pF1KSD GPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGD
       ::.: ::: : :: :::.: :.:: ::. :  :  ::::  :  :.::::. :.::  : 
CCDS29 GPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP
         230       240       250       260       270       280     

              260       270       280       290       300          
pF1KSD KGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE---PGTRGPP
        :. : :: :::.:  :. : .::::. :.: ::  :.::  :  :.:::   ::  :::
CCDS29 LGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPP
         290       300       310       320       330       340     

       310       320       330       340       350       360       
pF1KSD GLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAG
       ::  : : : ::.:::::::: .:::: :: ::: :  : ::  :: :  : ::.::  :
CCDS29 GL--P-GIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMG
            350       360       370       380       390       400  

       370       380       390       400       410       420       
pF1KSD LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKG
        ::  : ::::::.:  :: : :: .:. : .:. ::::  :: : :: .: ::: ::::
CCDS29 PPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKG
            410       420       430       440       450       460  

       430       440       450       460       470       480       
pF1KSD EPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPG
       : :  : :: ::: : :: ::. :.::. ::.:: ::::. ::.::::: :.:: :::::
CCDS29 EAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPG
            470       480       490       500       510       520  

       490       500       510        520         530       540    
pF1KSD LPGPPGEGRAGEPGTAGPTGPPGVPGSPGITG-P--PGPPGPPGPPGAPGAFDETGIA-G
       ::::::    :.::.::  :::: ::. :  : :  ::::::::::: :...  :    :
CCDS29 LPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQG
            530       540       550       560       570       580  

             550       560       570       580       590       600 
pF1KSD LHLPN-G-GVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNG
        .::. : :..:.   ..   . : .   :.  ::::: ::.:::  : ::::.. ::::
CCDS29 EYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNG
            590       600       610       620       630       640  

             610       620       630       640       650       660 
pF1KSD HSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASG
       ...::: :::::: : :::::::::: :: ::::::.::: :. :::::::::.::::::
CCDS29 RQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASG
            650       660       670       680       690       700  

             670       680       690       700   
pF1KSD GAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
       .::: :::.:.:..::::.:: :::. .:.::::::.:: : 
CCDS29 SAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYPM
            710       720       730       740    

>>CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6              (680 aa)
 initn: 3592 init1: 1912 opt: 2503  Z-score: 978.7  bits: 191.5 E(32554): 3.4e-48
Smith-Waterman score: 2503; 55.5% identity (69.9% similar) in 632 aa overlap (76-702:59-679)

          50        60        70        80        90       100     
pF1KSD PMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKP
                                     .: :::::  :::: ::: : :::::.:.:
CCDS51 TGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSP
       30        40        50        60        70        80        

         110       120       130       140       150       160     
pF1KSD GLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPG
       ::.:.::  :::: : .:: : :::::: :  :  : .:. :  :  : ::::::::.::
CCDS51 GLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPG
       90       100       110       120       130       140        

         170       180       190       200       210       220     
pF1KSD PSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAP
       :.::..::::: ::  : :: .: :: .: :: ::  : ::. : : :: ::  :  :  
CCDS51 PAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQ
      150       160       170       180       190       200        

         230       240       250       260       270       280     
pF1KSD GPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGA
       :: :  :: :.:: : .:.:: :: ::. : ::  :: : ::  :: :  : .:.: :::
CCDS51 GPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGA
      210       220       230       240       250       260        

         290       300       310       320       330       340     
pF1KSD AGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGED
       :: ::  :  :.:: ::. :  :  :: :.: ::::: ::.:::::.::  : .:: :  
CCDS51 AGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPA
      270       280       290       300       310       320        

         350       360          370       380       390       400  
pF1KSD GEPGEQGPQGLGGPPGL--P-GSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLA
       : ::.  : :: ::::   : :  :.:: .: ::::::.::.:: : :: .:..:  :  
CCDS51 GLPGK--P-GLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSD
      330          340       350       360       370       380     

            410       420       430       440       450       460  
pF1KSD GKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPS
       :::: ::. :: : .: ::  ::::.::  : :: :: .:  : ::  :  :. : ::  
CCDS51 GKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAP
         390       400       410       420       430       440     

            470       480       490       500       510       520  
pF1KSD GIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPG
       :::: .:: :: :  :.:: ::.:: ::::: .  .  :  ::::::: ::  : .: ::
CCDS51 GIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPG
         450       460       470       480       490       500     

            530       540       550        560        570       580
pF1KSD PPGPPGPPGAPGAFDETGIAGLHLPNGGVE-GAVLGKGGKPQFGLGE-LSAHATPAFTAV
        :::::::: ::     ..    .:.: .. :   . .: :  . .. ...  . :::..
CCDS51 LPGPPGPPGPPGQ----AV----MPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVI
         510           520           530       540       550       

              590       600       610       620       630       640
pF1KSD LTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKN
       :.. .:: : :. ::. ::: .. :.: :::::: . :.:::.::::::::.:::.::::
CCDS51 LSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVKGTHVWVGLYKN
       560       570       580       590       600       610       

              650       660       670       680       690       700
pF1KSD NVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLL
       ..:. :::::: :::::::::.:...:  :::::.:.:. ..:::::.::.::::::::.
CCDS51 GTPVMYTYDEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLV
       620       630       640       650       660       670       

          
pF1KSD CPT
        : 
CCDS51 APM
       680

>>CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX              (1685 aa)
 initn: 1235 init1: 764 opt: 1599  Z-score: 630.9  bits: 128.5 E(32554): 8e-29
Smith-Waterman score: 1786; 48.7% identity (58.8% similar) in 612 aa overlap (31-591:647-1243)

               10        20        30        40        50        60
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
                                     :  :  :       :: . :  : : :.: 
CCDS14 IGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGD
        620       630       640       650       660       670      

                      70        80          90       100        110
pF1KSD -------GQYLEMPLPLLPMDLKGEPGPPGK--PGPRGPPGPPGFPGKPGM-GKPGLHGQ
              :   .  :: .: . ::::: ::   ::: :: : ::.:: ::  : ::  : 
CCDS14 VGLPGDPGLPGQPGLPGIPGS-KGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGL
        680       690        700       710       720       730     

              120         130       140       150       160        
pF1KSD PGPAGPPGFSRMGKAGPPG--LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPG------
        :: :::::   :  : ::  :::  :::: ::..:  : .::.:. :::::::      
CCDS14 EGPPGPPGFP--GPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG
         740         750       760       770       780       790   

            170        180         190          200        210     
pF1KSD LPGPSGITIP-GKPGAQGVPGPPGF--QGEPGPQGEPGP---PGDRGLKGDNG-VGQPGL
       ::::.: . : :.:: .: :: ::.  :: ::: : :::   :: .:. :..:  : :::
CCDS14 LPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGL
           800       810       820       830       840       850   

           220       230        240          250          260      
pF1KSD --PGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPGA---PGDKGESG---PPGVPGPRGEP
         :: ::. :.:: :: ::: :  :.::: :  ::   :: ::: :   ::: ::: : :
CCDS14 DVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIP
           860       870       880       890       900       910   

        270       280       290       300            310        320
pF1KSD GAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG-----LIGPTGY-GMPGL
       :  :  :  : ::  . :  ::::: : .:.:::::  ::::     :.:  :  : :::
CCDS14 GRSGVPGLKGDDG--LQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGL
           920         930       940       950       960       970 

              330       340       350       360       370       380
pF1KSD PGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGE
       ::  :  :: :  :: :: :.:: .:.::  :: :  : :::::.   ::  :::: :: 
CCDS14 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQ---PGLIGPPGLKGT
             980       990      1000      1010         1020        

              390       400             410         420       430  
pF1KSD AGPGGPPGVPGIRGDQGPSGLAGKPGVPG------ERGLPGAH--GPPGPTGPKGEPGFT
        :  : ::  :..:  ::::. :.:: ::      ..: ::    : ::  :::::::. 
CCDS14 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP
     1030      1040      1050      1060      1070      1080        

            440       450       460       470       480       490  
pF1KSD GRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPP
       : ::.::. :..:. :  :::: :: .:  :.::. :  :: ::.:. :  :.::::: :
CCDS14 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEP
     1090      1100      1110      1120      1130      1140        

             500       510       520       530         540         
pF1KSD GE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG--APGAFDETGIAGLHLPNG
       :  : .:.::  :: :  : ::. :: :: :  : :: ::   ::     :..: .  .:
CCDS14 GPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSG-QKGDG
     1150      1160      1170      1180      1190      1200        

     550       560       570       580       590       600         
pF1KSD GVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPAT
       :. : . :. : :    :: . :. :.   :   : :  : :                  
CCDS14 GLPG-IPGNPGLPG-PKGEPGFHGFPG---VQGPPGPP-GSPGPALEGPKGNPGPQGPPG
      1210       1220       1230         1240       1250      1260 

     610       620       630       640       650       660         
pF1KSD GIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRP
                                                                   
CCDS14 RPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKG
            1270      1280      1290      1300      1310      1320 

>>CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX              (1691 aa)
 initn: 1235 init1: 764 opt: 1599  Z-score: 630.9  bits: 128.5 E(32554): 8.1e-29
Smith-Waterman score: 1786; 48.7% identity (58.8% similar) in 612 aa overlap (31-591:647-1243)

               10        20        30        40        50        60
pF1KSD MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK
                                     :  :  :       :: . :  : : :.: 
CCDS35 IGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGD
        620       630       640       650       660       670      

                      70        80          90       100        110
pF1KSD -------GQYLEMPLPLLPMDLKGEPGPPGK--PGPRGPPGPPGFPGKPGM-GKPGLHGQ
              :   .  :: .: . ::::: ::   ::: :: : ::.:: ::  : ::  : 
CCDS35 VGLPGDPGLPGQPGLPGIPGS-KGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGL
        680       690        700       710       720       730     

              120         130       140       150       160        
pF1KSD PGPAGPPGFSRMGKAGPPG--LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPG------
        :: :::::   :  : ::  :::  :::: ::..:  : .::.:. :::::::      
CCDS35 EGPPGPPGFP--GPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG
         740         750       760       770       780       790   

            170        180         190          200        210     
pF1KSD LPGPSGITIP-GKPGAQGVPGPPGF--QGEPGPQGEPGP---PGDRGLKGDNG-VGQPGL
       ::::.: . : :.:: .: :: ::.  :: ::: : :::   :: .:. :..:  : :::
CCDS35 LPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGL
           800       810       820       830       840       850   

           220       230        240          250          260      
pF1KSD --PGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPGA---PGDKGESG---PPGVPGPRGEP
         :: ::. :.:: :: ::: :  :.::: :  ::   :: ::: :   ::: ::: : :
CCDS35 DVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIP
           860       870       880       890       900       910   

        270       280       290       300            310        320
pF1KSD GAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG-----LIGPTGY-GMPGL
       :  :  :  : ::  . :  ::::: : .:.:::::  ::::     :.:  :  : :::
CCDS35 GRSGVPGLKGDDG--LQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGL
           920         930       940       950       960       970 

              330       340       350       360       370       380
pF1KSD PGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGE
       ::  :  :: :  :: :: :.:: .:.::  :: :  : :::::.   ::  :::: :: 
CCDS35 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQ---PGLIGPPGLKGT
             980       990      1000      1010         1020        

              390       400             410         420       430  
pF1KSD AGPGGPPGVPGIRGDQGPSGLAGKPGVPG------ERGLPGAH--GPPGPTGPKGEPGFT
        :  : ::  :..:  ::::. :.:: ::      ..: ::    : ::  :::::::. 
CCDS35 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP
     1030      1040      1050      1060      1070      1080        

            440       450       460       470       480       490  
pF1KSD GRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPP
       : ::.::. :..:. :  :::: :: .:  :.::. :  :: ::.:. :  :.::::: :
CCDS35 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEP
     1090      1100      1110      1120      1130      1140        

             500       510       520       530         540         
pF1KSD GE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG--APGAFDETGIAGLHLPNG
       :  : .:.::  :: :  : ::. :: :: :  : :: ::   ::     :..: .  .:
CCDS35 GPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSG-QKGDG
     1150      1160      1170      1180      1190      1200        

     550       560       570       580       590       600         
pF1KSD GVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPAT
       :. : . :. : :    :: . :. :.   :   : :  : :                  
CCDS35 GLPG-IPGNPGLPG-PKGEPGFHGFPG---VQGPPGPP-GSPGPALEGPKGNPGPQGPPG
      1210       1220       1230         1240       1250      1260 

     610       620       630       640       650       660         
pF1KSD GIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRP
                                                                   
CCDS35 RPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG
            1270      1280      1290      1300      1310      1320 

>>CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9               (1838 aa)
 initn: 619 init1: 619 opt: 1588  Z-score: 626.3  bits: 127.8 E(32554): 1.4e-28
Smith-Waterman score: 1662; 46.8% identity (56.9% similar) in 601 aa overlap (23-562:985-1563)

                       10        20        30          40          
pF1KSD         MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM-QK
                                     : ....:  :  :..:  .:.    :: ..
CCDS69 GPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGER
          960       970       980       990      1000      1010    

      50        60        70          80        90       100       
pF1KSD GPVGPPFREGKGQYLEMPLPLLP--MDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKP--
       :  :::     :   :. :: :      ::.::: : ::  ::::  ::::  :.  :  
CCDS69 GHPGPP-----GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVG
         1020           1030      1040      1050      1060         

           110       120              130       140       150      
pF1KSD --GLHGQPGPAGPPGFSR-------MGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRG
         ::.:. :: :::: .         : ::: :.::. :: : ::  :: :  :..: .:
CCDS69 ALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQG
    1070      1080      1090      1100      1110      1120         

              160        170       180       190       200         
pF1KSD PPG------PPGLPGPSG-ITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNG
       : :      : :::::.: .  ::. : .:  : :: .:  : .:: ::::  : .:   
CCDS69 PAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGP--
    1130      1140      1150      1160      1170      1180         

     210          220                230       240       250       
pF1KSD VGQPGLPGA---PG----QG-----GAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG--
       .::::  ::   ::    ::     :  :: :.:::   :  ::.:::: ::.:::.:  
CCDS69 IGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPP--GPVGLQGLPGPPGEKGETGDV
      1190      1200      1210      1220        1230      1240     

             260          270       280       290       300        
pF1KSD ----PPGVPGPRGE---PGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG
           ::: :::::    ::: ::.::::  :.: :::.:  :  : .:  : ::  ::::
CCDS69 GQMGPPGPPGPRGPSGAPGADGPQGPPG--GIGNPGAVGEKGEPGEAGEPGLPGEGGPPG
        1250      1260      1270        1280      1290      1300   

               310        320       330       340       350        
pF1KSD ---------LIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
                  ::.:  : ::  :: :: :: : :: .:    ::. : ::: :: :  :
CCDS69 PKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVG---FPGDPGPPGEPGPAGQDG
          1310      1320      1330      1340         1350      1360

      360       370       380       390       400       410        
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
       :::  :. : ::. : ::: :: ::.::::    ::  ::.:  :. :  : .:  : .:
CCDS69 PPGDKGDDGEPGQTGSPGPTGEPGPSGPPGK---RGPPGPAGPEGRQGEKGAKGEAGLEG
             1370      1380      1390         1400      1410       

      420       430       440       450       460             470  
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSG------IPGLQGPAG
       ::: ::: :  :  :.::  :. :  :  :. ::::.::  :: :      .:::.: .:
CCDS69 PPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSG
      1420      1430      1440      1450      1460      1470       

            480       490        500       510       520       530 
pF1KSD PIGPQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG
       : : .: :::    :: ::::: :. :. :  :: :  :  :  ::::: :: :::::::
CCDS69 PKGEKGHPGL---IGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPG
      1480         1490      1500      1510      1520      1530    

             540       550       560       570       580       590 
pF1KSD APGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMP
        ::     :  :   :.:  .: . :. : :                             
CCDS69 LPGPPGPKGAKGSSGPTGP-KGEA-GHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQL
         1540      1550        1560      1570      1580      1590  

             600       610       620       630       640       650 
pF1KSD VKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEY
                                                                   
CCDS69 LDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDG
           1600      1610      1620      1630      1640      1650  

>--
 initn: 603 init1: 603 opt: 1117  Z-score: 447.3  bits: 94.6 E(32554): 1.4e-18
Smith-Waterman score: 1484; 46.8% identity (54.5% similar) in 547 aa overlap (48-539:451-984)

        20        30        40        50        60         70      
pF1KSD LVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPL-PLLPMDLK
                                     .::  : :     :. .: :  :  :  : 
CCDS69 YDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP
              430       440       450       460       470       480

         80              90       100               110            
pF1KSD GEPG---PPGK---PGPRGPPGPPGFPGKPGM-GKPGLH-------GQPGPAGPPGF---
       : ::   : :.   :: ::::: ::.::  :. : ::         :  : ::  :    
CCDS69 GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS
              490       500       510       520       530       540

                 120          130          140       150       160 
pF1KSD ------------SRM---GKAGPPGL---PGKVGPPGQPGLRGEPGIRGDQGLRGPPGPP
                   .:.   : ::: ::   :: :::::. ::.::::  : :: ::  :::
CCDS69 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPP
              550       560       570       580       590       600

             170       180       190       200       210        220
pF1KSD GLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGV-GQPGLPGAPG
       :   :.:     ::: .:  :  : .: :   :. :: ::::. :  :. :. :  : ::
CCDS69 G---PAG-----KPGRRGRAGSDGARGMP---GQTGPKGDRGFDGLAGLPGEKGHRGDPG
                      610       620          630       640         

              230        240       250       260       270         
pF1KSD QGGAPGPPGLPGPAGL-GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG
        .: :::::  :  :  :. :  :::: :: .:  :: : ::: : ::..:  : ::  :
CCDS69 PSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKG
     650       660       670       680       690       700         

      280       290       300          310       320       330     
pF1KSD -VGVPGAAGLPGPQGPSGAKGEPGTRG---PPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
        ::  :  : :: ::  ::.: :: .:   :::  :: :   :::::  :  :: : :: 
CCDS69 NVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGK--PGLPGMPGADGPPGHPGK
     710       720       730       740         750       760       

         340       350       360       370       380          390  
pF1KSD LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAG-PG--GPPGVPGI
        :  :: : .: :: ::: :  :: :. :. :. : .:  : ::: : ::  :  :. : 
CCDS69 EGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGD
       770       780       790       800       810       820       

            400       410       420       430       440       450  
pF1KSD RGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL
       ::. :: :  :. :  : .:  : .: ::: :: :: :  : :: ::  :  : ::..:.
CCDS69 RGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGF
       830       840       850       860       870       880       

                  460       470       480       490           500  
pF1KSD PGQPGL------RGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPG----EGRAGEPGT
       :: ::       ::  : :: .:  :: ::.:  : .:  : ::: :    .: :: :: 
CCDS69 PGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGE
       890       900       910       920       930       940       

            510       520       530       540       550       560  
pF1KSD AGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKP
        ::.:: :  : ::  :::::::  : :: ::   ::                       
CCDS69 RGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGE
       950       960       970       980       990      1000       

            570       580       590       600       610       620  
pF1KSD QFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYF
                                                                   
CCDS69 TGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGP
      1010      1020      1030      1040      1050      1060       

>>CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9              (1838 aa)
 initn: 619 init1: 619 opt: 1588  Z-score: 626.3  bits: 127.8 E(32554): 1.4e-28
Smith-Waterman score: 1662; 46.8% identity (56.9% similar) in 601 aa overlap (23-562:985-1563)

                       10        20        30          40          
pF1KSD         MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM-QK
                                     : ....:  :  :..:  .:.    :: ..
CCDS75 GPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGER
          960       970       980       990      1000      1010    

      50        60        70          80        90       100       
pF1KSD GPVGPPFREGKGQYLEMPLPLLP--MDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKP--
       :  :::     :   :. :: :      ::.::: : ::  ::::  ::::  :.  :  
CCDS75 GHPGPP-----GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVG
         1020           1030      1040      1050      1060         

           110       120              130       140       150      
pF1KSD --GLHGQPGPAGPPGFSR-------MGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRG
         ::.:. :: :::: .         : ::: :.::. :: : ::  :: :  :..: .:
CCDS75 ALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQG
    1070      1080      1090      1100      1110      1120         

              160        170       180       190       200         
pF1KSD PPG------PPGLPGPSG-ITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNG
       : :      : :::::.: .  ::. : .:  : :: .:  : .:: ::::  : .:   
CCDS75 PAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGP--
    1130      1140      1150      1160      1170      1180         

     210          220                230       240       250       
pF1KSD VGQPGLPGA---PG----QG-----GAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG--
       .::::  ::   ::    ::     :  :: :.:::   :  ::.:::: ::.:::.:  
CCDS75 IGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPP--GPVGLQGLPGPPGEKGETGDV
      1190      1200      1210      1220        1230      1240     

             260          270       280       290       300        
pF1KSD ----PPGVPGPRGE---PGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG
           ::: :::::    ::: ::.::::  :.: :::.:  :  : .:  : ::  ::::
CCDS75 GQMGPPGPPGPRGPSGAPGADGPQGPPG--GIGNPGAVGEKGEPGEAGEPGLPGEGGPPG
        1250      1260      1270        1280      1290      1300   

               310        320       330       340       350        
pF1KSD ---------LIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
                  ::.:  : ::  :: :: :: : :: .:    ::. : ::: :: :  :
CCDS75 PKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVG---FPGDPGPPGEPGPAGQDG
          1310      1320      1330      1340         1350      1360

      360       370       380       390       400       410        
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
       :::  :. : ::. : ::: :: ::.::::    ::  ::.:  :. :  : .:  : .:
CCDS75 PPGDKGDDGEPGQTGSPGPTGEPGPSGPPGK---RGPPGPAGPEGRQGEKGAKGEAGLEG
             1370      1380      1390         1400      1410       

      420       430       440       450       460             470  
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSG------IPGLQGPAG
       ::: ::: :  :  :.::  :. :  :  :. ::::.::  :: :      .:::.: .:
CCDS75 PPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSG
      1420      1430      1440      1450      1460      1470       

            480       490        500       510       520       530 
pF1KSD PIGPQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPG
       : : .: :::    :: ::::: :. :. :  :: :  :  :  ::::: :: :::::::
CCDS75 PKGEKGHPGL---IGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPG
      1480         1490      1500      1510      1520      1530    

             540       550       560       570       580       590 
pF1KSD APGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMP
        ::     :  :   :.:  .: . :. : :                             
CCDS75 LPGPPGPKGAKGSSGPTGP-KGEA-GHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQL
         1540      1550        1560      1570      1580      1590  

             600       610       620       630       640       650 
pF1KSD VKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEY
                                                                   
CCDS75 LDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDG
           1600      1610      1620      1630      1640      1650  

>--
 initn: 603 init1: 603 opt: 1117  Z-score: 447.3  bits: 94.6 E(32554): 1.4e-18
Smith-Waterman score: 1484; 46.8% identity (54.5% similar) in 547 aa overlap (48-539:451-984)

        20        30        40        50        60         70      
pF1KSD LVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPL-PLLPMDLK
                                     .::  : :     :. .: :  :  :  : 
CCDS75 YDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP
              430       440       450       460       470       480

         80              90       100               110            
pF1KSD GEPG---PPGK---PGPRGPPGPPGFPGKPGM-GKPGLH-------GQPGPAGPPGF---
       : ::   : :.   :: ::::: ::.::  :. : ::         :  : ::  :    
CCDS75 GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS
              490       500       510       520       530       540

                 120          130          140       150       160 
pF1KSD ------------SRM---GKAGPPGL---PGKVGPPGQPGLRGEPGIRGDQGLRGPPGPP
                   .:.   : ::: ::   :: :::::. ::.::::  : :: ::  :::
CCDS75 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPP
              550       560       570       580       590       600

             170       180       190       200       210        220
pF1KSD GLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGV-GQPGLPGAPG
       :   :.:     ::: .:  :  : .: :   :. :: ::::. :  :. :. :  : ::
CCDS75 G---PAG-----KPGRRGRAGSDGARGMP---GQTGPKGDRGFDGLAGLPGEKGHRGDPG
                      610       620          630       640         

              230        240       250       260       270         
pF1KSD QGGAPGPPGLPGPAGL-GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG
        .: :::::  :  :  :. :  :::: :: .:  :: : ::: : ::..:  : ::  :
CCDS75 PSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKG
     650       660       670       680       690       700         

      280       290       300          310       320       330     
pF1KSD -VGVPGAAGLPGPQGPSGAKGEPGTRG---PPGLIGPTGYGMPGLPGPKGDRGPAGVPGL
        ::  :  : :: ::  ::.: :: .:   :::  :: :   :::::  :  :: : :: 
CCDS75 NVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGK--PGLPGMPGADGPPGHPGK
     710       720       730       740         750       760       

         340       350       360       370       380          390  
pF1KSD LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAG-PG--GPPGVPGI
        :  :: : .: :: ::: :  :: :. :. :. : .:  : ::: : ::  :  :. : 
CCDS75 EGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGD
       770       780       790       800       810       820       

            400       410       420       430       440       450  
pF1KSD RGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL
       ::. :: :  :. :  : .:  : .: ::: :: :: :  : :: ::  :  : ::..:.
CCDS75 RGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGF
       830       840       850       860       870       880       

                  460       470       480       490           500  
pF1KSD PGQPGL------RGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPG----EGRAGEPGT
       :: ::       ::  : :: .:  :: ::.:  : .:  : ::: :    .: :: :: 
CCDS75 PGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGE
       890       900       910       920       930       940       

            510       520       530       540       550       560  
pF1KSD AGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKP
        ::.:: :  : ::  :::::::  : :: ::   ::                       
CCDS75 RGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGE
       950       960       970       980       990      1000       

            570       580       590       600       610       620  
pF1KSD QFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYF
                                                                   
CCDS75 TGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGP
      1010      1020      1030      1040      1050      1060       

>>CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1               (1690 aa)
 initn: 1167 init1: 593 opt: 1531  Z-score: 605.0  bits: 123.7 E(32554): 2.2e-27
Smith-Waterman score: 1620; 43.9% identity (56.0% similar) in 647 aa overlap (23-610:839-1465)

                       10        20        30          40          
pF1KSD         MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM---
                                     : ....:  : ::..:  .:.    :.   
CCDS78 GPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGER
      810       820       830       840       850       860        

         50        60        70        80        90       100      
pF1KSD -QKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM----
        . :: ::: ..:      .:        ::.::: :  :  :: :  ::::. :.    
CCDS78 GHPGPPGPPGEQG------LPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQ
      870       880             890       900       910       920  

            110              120       130       140       150     
pF1KSD GKPGLHGQPGPAGPPG-------FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
       : :::.:  :: ::::        .  : ::: ::::. :: : ::  :: :  :..: .
CCDS78 GAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ
            930       940       950       960       970       980  

               160       170        180       190       200        
pF1KSD GPPG------PPGLPGPSGIT-IPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDN
       :: :      : :::::.: .  ::. : .:  : :: .:  : .:: ::::  ::.:  
CCDS78 GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV
            990      1000      1010      1020      1030      1040  

      210                 220       230       240       250        
pF1KSD GV-------GQPG---LPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG---
       :.       :.::     :  :: :  :  :.::: :    ::.:::: ::.:::.:   
CCDS78 GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG--PIGLQGLPGPPGEKGENGDVG
           1050      1060      1070        1080      1090      1100

            260          270           280          290       300  
pF1KSD ---PPGVPGPRGE--P-GAVGPKGPPG----VDGVGV---PGAAGLPGPQGPSGAKGEPG
          ::: :::::   : :: ::.::::    : :::    :: :: ::: : .:. :  :
CCDS78 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG
             1110      1120      1130      1140      1150      1160

            310        320       330       340       350       360 
pF1KSD TRGPPGLIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPG
        ::  :  :: :  : ::  :: :: :: : :: .:  :.::  ::::  : .:.::  :
CCDS78 ERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKG
             1170      1180      1190      1200      1210      1220

             370       380       390       400       410       420 
pF1KSD LPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPG
         :.   ::. :::::.::::: ::::    ::  : .:  :. :  : .:  ::.::::
CCDS78 EDGD---PGQPGPPGPSGEAGPPGPPGK---RGPPGAAGAEGRQGEKGAKGEAGAEGPPG
                1230      1240         1250      1260      1270    

             430       440       450             460       470     
pF1KSD PTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ------PGLRGPSGIPGLQGPAGPIG
        ::: :  : .:.::  :. :  :  :. ::::       ::  :: :.:::.:  :  :
CCDS78 KTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKG
         1280      1290      1300      1310      1320      1330    

         480       490        500       510       520       530    
pF1KSD PQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPG
        .: :::    :: ::::: :. :. :  :  : ::. :. :: :: :: ::::::: ::
CCDS78 EKGHPGL---IGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPG
         1340         1350      1360      1370      1380      1390 

          540       550        560       570       580       590   
pF1KSD AFDETGIAGLHLPNGGV-EGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVK
            :  :   : :   .... :  :.:    ::.  .  : ...  :    . :: . 
CCDS78 PQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP-GEV-IQPLPILSSKKTRRH-TEGMQAD
            1400      1410      1420        1430      1440         

           600       610       620       630       640       650   
pF1KSD FDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKK
        : .. .  .:..   :                                           
CCDS78 ADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWI
     1450      1460      1470      1480      1490      1500        

>--
 initn: 585 init1: 585 opt: 1029  Z-score: 414.2  bits: 88.4 E(32554): 9.5e-17
Smith-Waterman score: 1500; 45.2% identity (54.8% similar) in 571 aa overlap (28-539:301-838)

                  10        20        30          40          50   
pF1KSD    MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYA--PVKYIQP--MQKGPVG
                                     .: :: :  :    :.  ..:  . .:: :
CCDS78 YEYGEAEYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPA-VVEPGMLVEGPPG
              280       290       300       310        320         

            60        70        80        90       100             
pF1KSD PPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM-GKPGL-----
       :    :          . :  :.:  :::: :: ::::: ::.::  :. : ::      
CCDS78 PAGPAGI---------MGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLP
     330                340       350       360       370       380

         110       120                         130       140       
pF1KSD --HGQPGPAGPPGFSRMGKA------------GPPG------LPGKVGPPGQPGLRGE--
         .:  :  ::   .. ..:            ::::       :: :: ::. : .::  
CCDS78 FRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESG
              390       400       410       420       430       440

          150       160              170                180        
pF1KSD -PGIRGDQGLRGPPGPPGLPG----PS---GITIPGKPGAQG---------VPGPPGFQG
        :: .: .:..::::: : ::    :.   :  .::.:::.:         .::  : .:
CCDS78 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG
              450       460       470       480       490       500

      190       200        210       220       230        240      
pF1KSD EPGPQGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPG
       : :::: :::::: :..:..: .:  ::::  :  :  :: : ::  :  :  :.:: ::
CCDS78 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG
              510       520       530       540       550       560

        250             260       270       280        290         
pF1KSD APGD---KGESGPPGV---PGPRGEPGAVGPKGPPGVDGV-GVPGAAGLPGPQGPSGAKG
         :.   .:: ::::    :::.: ::  :: ::::  :  : :: ::::: .:: :  :
CCDS78 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPG
              570       580       590       600       610       620

     300       310        320       330       340       350        
pF1KSD EPGTRGPPGLIGPTGYGMP-GLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
       . :  :  : .:: :   : : :::.: .:  :: :: :..:: :::: :: .: .:: :
CCDS78 KEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKG
              630       640       650       660       670       680

      360       370       380       390       400       410        
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
         :  :. :  :. :: ::::.::: : ::         ::: ::.    :. :.::  :
CCDS78 DRGEVGQIGPRGEDGPEGPKGRAGPTGDPG---------PSGQAGE---KGKLGVPGLPG
              690       700       710                   720        

      420       430       440       450       460       470        
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG
        ::  ::::  ::      ::  :: :.::  :. :.:: ::  :  : .:  :  :: :
CCDS78 YPGRQGPKGSTGF------PGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG
      730       740             750       760       770       780  

      480       490       500       510       520       530        
pF1KSD LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE
        :: ::  :  ::::      ::  :: :: :  : ::  :::::::  : :: ::   :
CCDS78 KPGPKGTSGGDGPPGP-----PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGE
            790            800       810       820       830       

      540       550       560       570       580       590        
pF1KSD TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL
       :                                                           
CCDS78 TGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP
       840       850       860       870       880       890       

>>CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1             (1767 aa)
 initn: 1167 init1: 593 opt: 1531  Z-score: 604.8  bits: 123.7 E(32554): 2.3e-27
Smith-Waterman score: 1620; 43.9% identity (56.0% similar) in 647 aa overlap (23-610:916-1542)

                       10        20        30          40          
pF1KSD         MLGTLTPLSSLLLLLLVLVLGCGPRASSGG-GAGGAAG-YAPVKYIQPM---
                                     : ....:  : ::..:  .:.    :.   
CCDS53 GPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGER
         890       900       910       920       930       940     

         50        60        70        80        90       100      
pF1KSD -QKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM----
        . :: ::: ..:      .:        ::.::: :  :  :: :  ::::. :.    
CCDS53 GHPGPPGPPGEQG------LPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQ
         950             960       970       980       990         

            110              120       130       140       150     
pF1KSD GKPGLHGQPGPAGPPG-------FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR
       : :::.:  :: ::::        .  : ::: ::::. :: : ::  :: :  :..: .
CCDS53 GAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ
    1000      1010      1020      1030      1040      1050         

               160       170        180       190       200        
pF1KSD GPPG------PPGLPGPSGIT-IPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDN
       :: :      : :::::.: .  ::. : .:  : :: .:  : .:: ::::  ::.:  
CCDS53 GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV
    1060      1070      1080      1090      1100      1110         

      210                 220       230       240       250        
pF1KSD GV-------GQPG---LPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESG---
       :.       :.::     :  :: :  :  :.::: :    ::.:::: ::.:::.:   
CCDS53 GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG--PIGLQGLPGPPGEKGENGDVG
    1120      1130      1140      1150        1160      1170       

            260          270           280          290       300  
pF1KSD ---PPGVPGPRGE--P-GAVGPKGPPG----VDGVGV---PGAAGLPGPQGPSGAKGEPG
          ::: :::::   : :: ::.::::    : :::    :: :: ::: : .:. :  :
CCDS53 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG
      1180      1190      1200      1210      1220      1230       

            310        320       330       340       350       360 
pF1KSD TRGPPGLIGPTGY-GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPG
        ::  :  :: :  : ::  :: :: :: : :: .:  :.::  ::::  : .:.::  :
CCDS53 ERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKG
      1240      1250      1260      1270      1280      1290       

             370       380       390       400       410       420 
pF1KSD LPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPG
         :.   ::. :::::.::::: ::::    ::  : .:  :. :  : .:  ::.::::
CCDS53 EDGD---PGQPGPPGPSGEAGPPGPPGK---RGPPGAAGAEGRQGEKGAKGEAGAEGPPG
      1300         1310      1320         1330      1340      1350 

             430       440       450             460       470     
pF1KSD PTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ------PGLRGPSGIPGLQGPAGPIG
        ::: :  : .:.::  :. :  :  :. ::::       ::  :: :.:::.:  :  :
CCDS53 KTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKG
            1360      1370      1380      1390      1400      1410 

         480       490        500       510       520       530    
pF1KSD PQGLPGLKGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPG
        .: :::    :: ::::: :. :. :  :  : ::. :. :: :: :: ::::::: ::
CCDS53 EKGHPGL---IGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPG
               1420      1430      1440      1450      1460        

          540       550        560       570       580       590   
pF1KSD AFDETGIAGLHLPNGGV-EGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVK
            :  :   : :   .... :  :.:    ::.  .  : ...  :    . :: . 
CCDS53 PQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP-GEV-IQPLPILSSKKTRRH-TEGMQAD
     1470      1480      1490      1500        1510       1520     

           600       610       620       630       640       650   
pF1KSD FDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKK
        : .. .  .:..   :                                           
CCDS53 ADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWI
        1530      1540      1550      1560      1570      1580     

>--
 initn: 585 init1: 585 opt: 1049  Z-score: 421.6  bits: 89.8 E(32554): 3.7e-17
Smith-Waterman score: 1500; 45.2% identity (54.8% similar) in 571 aa overlap (28-539:378-915)

                  10        20        30          40          50   
pF1KSD    MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYA--PVKYIQP--MQKGPVG
                                     .: :: :  :    :.  ..:  . .:: :
CCDS53 KEYEDKPTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPA-VVEPGMLVEGPPG
       350       360       370       380       390        400      

            60        70        80        90       100             
pF1KSD PPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGM-GKPGL-----
       :    :          . :  :.:  :::: :: ::::: ::.::  :. : ::      
CCDS53 PAGPAGI---------MGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLP
        410                420       430       440       450       

         110       120                         130       140       
pF1KSD --HGQPGPAGPPGFSRMGKA------------GPPG------LPGKVGPPGQPGLRGE--
         .:  :  ::   .. ..:            ::::       :: :: ::. : .::  
CCDS53 FRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESG
       460       470       480       490       500       510       

          150       160              170                180        
pF1KSD -PGIRGDQGLRGPPGPPGLPG----PS---GITIPGKPGAQG---------VPGPPGFQG
        :: .: .:..::::: : ::    :.   :  .::.:::.:         .::  : .:
CCDS53 DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRG
       520       530       540       550       560       570       

      190       200        210       220       230        240      
pF1KSD EPGPQGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPGPAGL-GKPGLDGLPG
       : :::: :::::: :..:..: .:  ::::  :  :  :: : ::  :  :  :.:: ::
CCDS53 ERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG
       580       590       600       610       620       630       

        250             260       270       280        290         
pF1KSD APGD---KGESGPPGV---PGPRGEPGAVGPKGPPGVDGV-GVPGAAGLPGPQGPSGAKG
         :.   .:: ::::    :::.: ::  :: ::::  :  : :: ::::: .:: :  :
CCDS53 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPG
       640       650       660       670       680       690       

     300       310        320       330       340       350        
pF1KSD EPGTRGPPGLIGPTGYGMP-GLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG
       . :  :  : .:: :   : : :::.: .:  :: :: :..:: :::: :: .: .:: :
CCDS53 KEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKG
       700       710       720       730       740       750       

      360       370       380       390       400       410        
pF1KSD PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG
         :  :. :  :. :: ::::.::: : ::         ::: ::.    :. :.::  :
CCDS53 DRGEVGQIGPRGEDGPEGPKGRAGPTGDPG---------PSGQAGE---KGKLGVPGLPG
       760       770       780                790          800     

      420       430       440       450       460       470        
pF1KSD PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG
        ::  ::::  ::      ::  :: :.::  :. :.:: ::  :  : .:  :  :: :
CCDS53 YPGRQGPKGSTGF------PGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG
         810             820       830       840       850         

      480       490       500       510       520       530        
pF1KSD LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE
        :: ::  :  ::::      ::  :: :: :  : ::  :::::::  : :: ::   :
CCDS53 KPGPKGTSGGDGPPGP-----PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGE
     860       870            880       890       900       910    

      540       550       560       570       580       590        
pF1KSD TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL
       :                                                           
CCDS53 TGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGP
          920       930       940       950       960       970    




703 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 08:56:28 2016 done: Thu Nov  3 08:56:29 2016
 Total Scan time:  5.020 Total Display time:  0.270

Function used was FASTA [36.3.4 Apr, 2011]
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