FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5479, 486 aa 1>>>pF1KB5479 486 - 486 aa - 486 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2824+/-0.000769; mu= 19.3432+/- 0.047 mean_var=84.8711+/-16.637, 0's: 0 Z-trim(110.4): 32 B-trim: 54 in 1/51 Lambda= 0.139218 statistics sampled from 11566 (11595) to 11566 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.356), width: 16 Scan time: 3.470 The best scores are: opt bits E(32554) CCDS4229.1 APBB3 gene_id:10307|Hs108|chr5 ( 486) 3389 690.4 1.1e-198 CCDS4227.1 APBB3 gene_id:10307|Hs108|chr5 ( 493) 3365 685.6 3.2e-197 CCDS47279.1 APBB3 gene_id:10307|Hs108|chr5 ( 484) 3360 684.6 6.4e-197 CCDS4228.1 APBB3 gene_id:10307|Hs108|chr5 ( 491) 3360 684.6 6.5e-197 CCDS82918.1 APBB2 gene_id:323|Hs108|chr4 ( 737) 1089 228.6 1.8e-59 CCDS54761.1 APBB2 gene_id:323|Hs108|chr4 ( 758) 1089 228.6 1.8e-59 CCDS54762.1 APBB2 gene_id:323|Hs108|chr4 ( 759) 1089 228.6 1.8e-59 CCDS43224.1 APBB2 gene_id:323|Hs108|chr4 ( 736) 1072 225.2 1.9e-58 CCDS66015.1 APBB1 gene_id:322|Hs108|chr11 ( 451) 1021 214.8 1.6e-55 CCDS66016.1 APBB1 gene_id:322|Hs108|chr11 ( 475) 1021 214.8 1.7e-55 CCDS66017.1 APBB1 gene_id:322|Hs108|chr11 ( 490) 1021 214.8 1.7e-55 CCDS66018.1 APBB1 gene_id:322|Hs108|chr11 ( 710) 1021 214.9 2.2e-55 CCDS58114.1 APBB1 gene_id:322|Hs108|chr11 ( 488) 998 210.2 4.2e-54 CCDS31410.1 APBB1 gene_id:322|Hs108|chr11 ( 708) 998 210.3 5.5e-54 CCDS54760.1 APBB2 gene_id:323|Hs108|chr4 ( 210) 475 104.8 9.4e-23 >>CCDS4229.1 APBB3 gene_id:10307|Hs108|chr5 (486 aa) initn: 3389 init1: 3389 opt: 3389 Z-score: 3680.3 bits: 690.4 E(32554): 1.1e-198 Smith-Waterman score: 3389; 100.0% identity (100.0% similar) in 486 aa overlap (1-486:1-486) 10 20 30 40 50 60 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVASDKDSCMLKCHVFCCDVPAKAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVASDKDSCMLKCHVFCCDVPAKAIA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 SALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEALYMGTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEALYMGTLP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 VTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 LVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 RGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKP 430 440 450 460 470 480 pF1KB5 SLLHMP :::::: CCDS42 SLLHMP >>CCDS4227.1 APBB3 gene_id:10307|Hs108|chr5 (493 aa) initn: 3375 init1: 1893 opt: 3365 Z-score: 3654.1 bits: 685.6 E(32554): 3.2e-197 Smith-Waterman score: 3365; 98.6% identity (98.6% similar) in 493 aa overlap (1-486:1-493) 10 20 30 40 50 60 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS 130 140 150 160 170 180 190 200 210 220 230 pF1KB5 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRD-------RDFAFVASDKDSCMLKCHVFCCD :::::::::::::::::::::::::::::: ::::::::::::::::::::::: CCDS42 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRDSPISAPARDFAFVASDKDSCMLKCHVFCCD 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB5 VPAKAIASALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VPAKAIASALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEA 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB5 LYMGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LYMGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEP 310 320 330 340 350 360 360 370 380 390 400 410 pF1KB5 LWQCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LWQCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQK 370 380 390 400 410 420 420 430 440 450 460 470 pF1KB5 CLVASAARGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 CLVASAARGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFL 430 440 450 460 470 480 480 pF1KB5 DAFRLKPSLLHMP ::::::::::::: CCDS42 DAFRLKPSLLHMP 490 >>CCDS47279.1 APBB3 gene_id:10307|Hs108|chr5 (484 aa) initn: 1901 init1: 1901 opt: 3360 Z-score: 3648.8 bits: 684.6 E(32554): 6.4e-197 Smith-Waterman score: 3360; 99.6% identity (99.6% similar) in 486 aa overlap (1-486:1-484) 10 20 30 40 50 60 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVASDKDSCMLKCHVFCCDVPAKAIA :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: CCDS47 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRD--FAFVASDKDSCMLKCHVFCCDVPAKAIA 190 200 210 220 230 250 260 270 280 290 300 pF1KB5 SALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEALYMGTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEALYMGTLP 240 250 260 270 280 290 310 320 330 340 350 360 pF1KB5 VTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVR 300 310 320 330 340 350 370 380 390 400 410 420 pF1KB5 LVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAA 360 370 380 390 400 410 430 440 450 460 470 480 pF1KB5 RGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKP 420 430 440 450 460 470 pF1KB5 SLLHMP :::::: CCDS47 SLLHMP 480 >>CCDS4228.1 APBB3 gene_id:10307|Hs108|chr5 (491 aa) initn: 3367 init1: 1893 opt: 3360 Z-score: 3648.7 bits: 684.6 E(32554): 6.5e-197 Smith-Waterman score: 3360; 98.8% identity (98.8% similar) in 491 aa overlap (1-486:1-491) 10 20 30 40 50 60 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 WELGDAEDPGTGTEGIWGLRPPKGRSFSSLESSLDRSNSLSWYGGESYIQSMEPGAKCFA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMS 130 140 150 160 170 180 190 200 210 220 230 pF1KB5 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRD-----RDFAFVASDKDSCMLKCHVFCCDVP ::::::::::::::::::::::::::::: ::::::::::::::::::::::::: CCDS42 LVNPLDHSLIHCQPLVHIRVWGVGSSKGRPISAPARDFAFVASDKDSCMLKCHVFCCDVP 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB5 AKAIASALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEALY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 AKAIASALHGLCAQILSERVEVSGDASCCSPDPISPEDLPRQVELLDAVSQAAQKYEALY 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB5 MGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLW 310 320 330 340 350 360 360 370 380 390 400 410 pF1KB5 QCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCL 370 380 390 400 410 420 420 430 440 450 460 470 pF1KB5 VASAARGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VASAARGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDA 430 440 450 460 470 480 480 pF1KB5 FRLKPSLLHMP ::::::::::: CCDS42 FRLKPSLLHMP 490 >>CCDS82918.1 APBB2 gene_id:323|Hs108|chr4 (737 aa) initn: 1048 init1: 449 opt: 1089 Z-score: 1181.3 bits: 228.6 E(32554): 1.8e-59 Smith-Waterman score: 1301; 42.8% identity (68.6% similar) in 491 aa overlap (16-486:277-737) 10 20 30 40 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTY . :.:.:::.... :::::... : :::: CCDS82 LHRIQNLAPSDEESSWTTLSQDSASPSSPDETDIWSDHSFQTDPDLPPGWKRVSDIAGTY 250 260 270 280 290 300 50 60 70 80 90 pF1KB5 YWHVPSGSTQWQRPTWELGDAEDPGTGTEGIWGLRP-PKGR-----------SFSSLESS :::.:.:.:::.::. .: . :. . : :... :.. .:.. CCDS82 YWHIPTGTTQWERPVSIPADLQGSRKGSLSSVTPSPTPENEDLHAATVNPDPSLKEFEGA 310 320 330 340 350 360 100 110 120 130 140 pF1KB5 LDRSNSLSWYGG------ESYIQSMEPGAKCFAVRSLGWVEVPEEDLAPGKSSIAVNNCI : ::. .. .: . .: :::::::::::::. ::::::::::.:::::: CCDS82 TLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCI 370 380 390 400 410 420 150 160 170 180 190 200 pF1KB5 QQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSK .::. .. . : ::::..: .::..: .:::.:.:.:..: ::.: ::::::: .. CCDS82 RQLSYCKNDIRDTVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDN 430 440 450 460 470 480 210 220 230 240 250 260 pF1KB5 GRDRDFAFVASDKDSCMLKCHVFCCDVPAKAIASALHGLCAQILSERVEVSGDASCCSPD ::: ::.:: :::. .:::::: ::.::::::..:: .:..:..:: .... : : : . CCDS82 GRD--FAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIMAERKNAKALA-CSSLQ 490 500 510 520 530 540 270 280 290 300 310 320 pF1KB5 PISPE--DLPRQVELLDAVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLTARGDRNA . :.: ::.. .. .::... :.: ::: : .:::.:: :: .: . .... CCDS82 ERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKED 550 560 570 580 590 600 330 340 350 360 370 380 pF1KB5 WVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGRQSF :. . ..:.:. .: . .: ..::: : .: ::...:.:::.: :::..: : : : : CCDS82 WLSVNMNVADATVT---VISE-KNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRF 610 620 630 640 650 390 400 410 420 430 440 pF1KB5 QCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTSSMDSPG .: .:::.:.::..:::::::::..::::::: : .: CCDS82 ECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQK---------VR----------- 660 670 680 690 450 460 470 480 pF1KB5 GPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKPSLLHMP : : : .: .: ::::.:..:... : . .:: CCDS82 -PPPPP--ADSVTRRVTTNVKRGVLSLIDTLKQKRPVTEMP 700 710 720 730 >>CCDS54761.1 APBB2 gene_id:323|Hs108|chr4 (758 aa) initn: 1048 init1: 449 opt: 1089 Z-score: 1181.1 bits: 228.6 E(32554): 1.8e-59 Smith-Waterman score: 1269; 41.4% identity (65.4% similar) in 512 aa overlap (16-486:277-758) 10 20 30 40 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTY . :.:.:::.... :::::... : :::: CCDS54 LHRIQNLAPSDEESSWTTLSQDSASPSSPDETDIWSDHSFQTDPDLPPGWKRVSDIAGTY 250 260 270 280 290 300 50 60 70 pF1KB5 YWHVPSGSTQWQRPT-----------------------------WELGDAEDPGTGTEGI :::.:.:.:::.::. : . . : . : CCDS54 YWHIPTGTTQWERPVSIPADLQGSRKGSLSSVTPSPTPENEKQPWSDFAVLNGGKINSDI 310 320 330 340 350 360 80 90 100 110 120 pF1KB5 WG------LRP-PKGRSF--SSLE-SSLDRSNSLSWYGGESYIQSMEPGAKCFAVRSLGW : . : :. . : ..:. .:: :. .: . .: ::::::::::: CCDS54 WKDLHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGW 370 380 390 400 410 420 130 140 150 160 170 180 pF1KB5 VEVPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMSLVNPLD ::. ::::::::::.::::::.::. .. . : ::::..: .::..: .:::.:.: CCDS54 VEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRDTVGIWGEGKDMYLILENDMLSLVDPMD 430 440 450 460 470 480 190 200 210 220 230 240 pF1KB5 HSLIHCQPLVHIRVWGVGSSKGRDRDFAFVASDKDSCMLKCHVFCCDVPAKAIASALHGL .:..: ::.: ::::::: ..::: ::.:: :::. .:::::: ::.::::::..:: . CCDS54 RSVLHSQPIVSIRVWGVGRDNGRD--FAYVARDKDTRILKCHVFRCDTPAKAIATSLHEI 490 500 510 520 530 540 250 260 270 280 290 300 pF1KB5 CAQILSERVEVSGDASCCSPDPISPE--DLPRQVELLDAVSQAAQKYEALYMGTLPVTKA :..:..:: .... : : : . . :.: ::.. .. .::... :.: ::: : CCDS54 CSKIMAERKNAKALA-CSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKP 550 560 570 580 590 600 310 320 330 340 350 360 pF1KB5 MGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTF .:::.:: :: .: . .... :. . ..:.:. .: . .: ..::: : .: ::...: CCDS54 VGMDILNSAIENLMTSSNKEDWLSVNMNVADATVT---VISE-KNEEEVLVECRVRFLSF 610 620 630 640 650 370 380 390 400 410 420 pF1KB5 IGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAARGKA .:::.: :::..: : : : :.: .:::.:.::..:::::::::..::::::: : CCDS54 MGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQK- 660 670 680 690 700 710 430 440 450 460 470 480 pF1KB5 WGAQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKPSLLH .: : : : .: .: ::::.:..:... : . . CCDS54 --------VR------------PPPPP--ADSVTRRVTTNVKRGVLSLIDTLKQKRPVTE 720 730 740 750 pF1KB5 MP :: CCDS54 MP >>CCDS54762.1 APBB2 gene_id:323|Hs108|chr4 (759 aa) initn: 1047 init1: 449 opt: 1089 Z-score: 1181.1 bits: 228.6 E(32554): 1.8e-59 Smith-Waterman score: 1268; 41.6% identity (65.5% similar) in 510 aa overlap (18-486:280-759) 10 20 30 40 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYW :.:.:::.... :::::... : :::::: CCDS54 IQNLAPSDEESSWTTLSQDSASPSSPDETADIWSDHSFQTDPDLPPGWKRVSDIAGTYYW 250 260 270 280 290 300 50 60 70 pF1KB5 HVPSGSTQWQRPT-----------------------------WELGDAEDPGTGTEGIWG :.:.:.:::.::. : . . : . :: CCDS54 HIPTGTTQWERPVSIPADLQGSRKGSLSSVTPSPTPENEKQPWSDFAVLNGGKINSDIWK 310 320 330 340 350 360 80 90 100 110 120 pF1KB5 ------LRP-PKGRSF--SSLE-SSLDRSNSLSWYGGESYIQSMEPGAKCFAVRSLGWVE . : :. . : ..:. .:: :. .: . .: ::::::::::::: CCDS54 DLHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVE 370 380 390 400 410 420 130 140 150 160 170 180 pF1KB5 VPEEDLAPGKSSIAVNNCIQQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMSLVNPLDHS . ::::::::::.::::::.::. .. . : ::::..: .::..: .:::.:.:.: CCDS54 MAEEDLAPGKSSVAVNNCIRQLSYCKNDIRDTVGIWGEGKDMYLILENDMLSLVDPMDRS 430 440 450 460 470 480 190 200 210 220 230 240 pF1KB5 LIHCQPLVHIRVWGVGSSKGRDRDFAFVASDKDSCMLKCHVFCCDVPAKAIASALHGLCA ..: ::.: ::::::: ..:: :::.:: :::. .:::::: ::.::::::..:: .:. CCDS54 VLHSQPIVSIRVWGVGRDNGR--DFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICS 490 500 510 520 530 540 250 260 270 280 290 300 pF1KB5 QILSERVEVSGDASCCSPDPISPE--DLPRQVELLDAVSQAAQKYEALYMGTLPVTKAMG .:..:: .... : : : . . :.: ::.. .. .::... :.: ::: : .: CCDS54 KIMAERKNAKALA-CSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVG 550 560 570 580 590 600 310 320 330 340 350 360 pF1KB5 MDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTFIG ::.:: :: .: . .... :. . ..:.:. .: . .: ..::: : .: ::...:.: CCDS54 MDILNSAIENLMTSSNKEDWLSVNMNVADATVT---VISE-KNEEEVLVECRVRFLSFMG 610 620 630 640 650 660 370 380 390 400 410 420 pF1KB5 VGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAARGKAWG ::.: :::..: : : : :.: .:::.:.::..:::::::::..::::::: : CCDS54 VGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQK--- 670 680 690 700 710 430 440 450 460 470 480 pF1KB5 AQARARLRLKRTSSMDSPGGPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKPSLLHMP .: : : : .: .: ::::.:..:... : . .:: CCDS54 ------VR------------PPPPP--ADSVTRRVTTNVKRGVLSLIDTLKQKRPVTEMP 720 730 740 750 >>CCDS43224.1 APBB2 gene_id:323|Hs108|chr4 (736 aa) initn: 1048 init1: 449 opt: 1072 Z-score: 1162.8 bits: 225.2 E(32554): 1.9e-58 Smith-Waterman score: 1284; 42.6% identity (68.4% similar) in 491 aa overlap (16-486:277-736) 10 20 30 40 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTY . :.:.:::.... :::::... : :::: CCDS43 LHRIQNLAPSDEESSWTTLSQDSASPSSPDETDIWSDHSFQTDPDLPPGWKRVSDIAGTY 250 260 270 280 290 300 50 60 70 80 90 pF1KB5 YWHVPSGSTQWQRPTWELGDAEDPGTGTEGIWGLRP-PKGR-----------SFSSLESS :::.:.:.:::.::. .: . :. . : :... :.. .:.. CCDS43 YWHIPTGTTQWERPVSIPADLQGSRKGSLSSVTPSPTPENEDLHAATVNPDPSLKEFEGA 310 320 330 340 350 360 100 110 120 130 140 pF1KB5 LDRSNSLSWYGG------ESYIQSMEPGAKCFAVRSLGWVEVPEEDLAPGKSSIAVNNCI : ::. .. .: . .: :::::::::::::. ::::::::::.:::::: CCDS43 TLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCI 370 380 390 400 410 420 150 160 170 180 190 200 pF1KB5 QQLAQTRSRSQPPDGAWGEGQNMLMILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSK .::. .. . : ::::..: .::..: .:::.:.:.:..: ::.: ::::::: .. CCDS43 RQLSYCKNDIRDTVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDN 430 440 450 460 470 480 210 220 230 240 250 260 pF1KB5 GRDRDFAFVASDKDSCMLKCHVFCCDVPAKAIASALHGLCAQILSERVEVSGDASCCSPD ::: ::.:: :::. .:::::: ::.::::::..:: .:..:..:: .... : : : . CCDS43 GRD--FAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIMAERKNAKALA-CSSLQ 490 500 510 520 530 540 270 280 290 300 310 320 pF1KB5 PISPE--DLPRQVELLDAVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLTARGDRNA . :.: : .. .. .::... :.: ::: : .:::.:: :: .: . .... CCDS43 ERANVNLDVPLQ-DFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKED 550 560 570 580 590 600 330 340 350 360 370 380 pF1KB5 WVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGRQSF :. . ..:.:. .: . .: ..::: : .: ::...:.:::.: :::..: : : : : CCDS43 WLSVNMNVADATVT---VISE-KNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRF 610 620 630 640 650 390 400 410 420 430 440 pF1KB5 QCAAFWCQPHAGGLSEAVQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTSSMDSPG .: .:::.:.::..:::::::::..::::::: : .: CCDS43 ECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQK---------VR----------- 660 670 680 690 450 460 470 480 pF1KB5 GPLPLPLLKGGVGGAGATPRKRGVFSFLDAFRLKPSLLHMP : : : .: .: ::::.:..:... : . .:: CCDS43 -PPPPP--ADSVTRRVTTNVKRGVLSLIDTLKQKRPVTEMP 700 710 720 730 >>CCDS66015.1 APBB1 gene_id:322|Hs108|chr11 (451 aa) initn: 681 init1: 562 opt: 1021 Z-score: 1110.3 bits: 214.8 E(32554): 1.6e-55 Smith-Waterman score: 1100; 41.8% identity (69.1% similar) in 411 aa overlap (37-417:2-405) 10 20 30 40 50 pF1KB5 MLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRP------- ...:..::::::.:.:.:::. : CCDS66 MRVQDTSGTYYWHIPTGTTQWEPPGRASPSQ 10 20 30 60 70 80 90 pF1KB5 ----------TWELGDAEDPGTGTEGIW------------GLRPPKGRSFSSLESSLDRS :: : :. : .: ::. :. ... .::. CCDS66 GSSPQEESQLTWT-GFAHGEGFEDGEFWKDEPSDEAPMELGLKEPEEGTLTFPAQSLS-P 40 50 60 70 80 100 110 120 130 140 150 pF1KB5 NSLSWYGGESYIQSMEPGAKCFAVRSLGWVEVPEEDLAPGKSSIAVNNCIQQLAQTRSRS . : . .. .:: ::::::::::::. ::.::::.::.::::::.::. .. CCDS66 EPLPQEEEKLPPRNTNPGIKCFAVRSLGWVEMTEEELAPGRSSVAVNNCIRQLSYHKNNL 90 100 110 120 130 140 160 170 180 190 200 210 pF1KB5 QPP-DGAWGEGQNMLMILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFV . : .:.::::...:. :. ....::.: ...:.: ::.. ::::::: ..::.::::.: CCDS66 HDPMSGGWGEGKDLLLQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYV 150 160 170 180 190 200 220 230 240 250 260 270 pF1KB5 ASDKDSCMLKCHVFCCDVPAKAIASALHGLCAQILSERVEVSGDASCCSPDPISPEDLPR : :: . ::::::: :..::: ::..:: .:..:..:: .. .. : : . :.: CCDS66 ARDKLTQMLKCHVFRCEAPAKNIATSLHEICSKIMAERRNARCLVNGLSLDHSKLVDVPF 210 220 230 240 250 260 280 290 300 310 320 330 pF1KB5 QVELLDAVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDS :::. .. .::... :.:..::.: .:.::.: :. .. . ..:. :.:. .::. . CCDS66 QVEFPAPKNELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPA 270 280 290 300 310 320 340 350 360 370 380 390 pF1KB5 LMTAHPIQAEASTEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHA .: :.:: : .: ::...:..:::: :::..: : :: : :::.:.: CCDS66 TLTILHQQTEAV-----LGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNA 330 340 350 360 370 380 400 410 420 430 440 450 pF1KB5 GGLSEAVQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTSSMDSPGGPLPLPLLKGG ..::::::::::..::::: : CCDS66 ASLSEAVQAACMLRYQKCLDARSQASTSCLPAPPAESVARRVGWTVRRGVQSLWGSLKPK 390 400 410 420 430 440 >>CCDS66016.1 APBB1 gene_id:322|Hs108|chr11 (475 aa) initn: 750 init1: 562 opt: 1021 Z-score: 1110.0 bits: 214.8 E(32554): 1.7e-55 Smith-Waterman score: 1169; 41.5% identity (69.6% similar) in 431 aa overlap (17-417:6-429) 10 20 30 40 50 pF1KB5 MLGKDYMLAIILVNCDDDLWGDHSLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRP- :..:. ...:... :: :: ...:..::::::.:.:.:::. : CCDS66 MTQMRDSFWNPNAFETDSDLPAGWMRVQDTSGTYYWHIPTGTTQWEPPG 10 20 30 40 60 70 80 90 pF1KB5 ----------------TWELGDAEDPGTGTEGIW------------GLRPPKGRSFSSLE :: : :. : .: ::. :. ... CCDS66 RASPSQGSSPQEESQLTWT-GFAHGEGFEDGEFWKDEPSDEAPMELGLKEPEEGTLTFPA 50 60 70 80 90 100 100 110 120 130 140 150 pF1KB5 SSLDRSNSLSWYGGESYIQSMEPGAKCFAVRSLGWVEVPEEDLAPGKSSIAVNNCIQQLA .::. . : . .. .:: ::::::::::::. ::.::::.::.::::::.::. CCDS66 QSLS-PEPLPQEEEKLPPRNTNPGIKCFAVRSLGWVEMTEEELAPGRSSVAVNNCIRQLS 110 120 130 140 150 160 160 170 180 190 200 210 pF1KB5 QTRSRSQPP-DGAWGEGQNMLMILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRD .. . : .:.::::...:. :. ....::.: ...:.: ::.. ::::::: ..::. CCDS66 YHKNNLHDPMSGGWGEGKDLLLQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRE 170 180 190 200 210 220 220 230 240 250 260 270 pF1KB5 RDFAFVASDKDSCMLKCHVFCCDVPAKAIASALHGLCAQILSERVEVSGDASCCSPDPIS ::::.:: :: . ::::::: :..::: ::..:: .:..:..:: .. .. : : . CCDS66 RDFAYVARDKLTQMLKCHVFRCEAPAKNIATSLHEICSKIMAERRNARCLVNGLSLDHSK 230 240 250 260 270 280 280 290 300 310 320 330 pF1KB5 PEDLPRQVELLDAVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTM :.: :::. .. .::... :.:..::.: .:.::.: :. .. . ..:. :.:. CCDS66 LVDVPFQVEFPAPKNELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSH 290 300 310 320 330 340 340 350 360 370 380 390 pF1KB5 LSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAF .::. . .: :.:: : .: ::...:..:::: :::..: : :: : : CCDS66 VSVAPATLTILHQQTEAV-----LGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMF 350 360 370 380 390 400 400 410 420 430 440 450 pF1KB5 WCQPHAGGLSEAVQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTSSMDSPGGPLPL ::.:.:..::::::::::..::::: : CCDS66 WCEPNAASLSEAVQAACMLRYQKCLDARSQASTSCLPAPPAESVARRVGWTVRRGVQSLW 410 420 430 440 450 460 486 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 08:45:07 2016 done: Thu Nov 3 08:45:07 2016 Total Scan time: 3.470 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]